Halomonas sp. KO116: KO116_03328
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Entry
KO116_03328 CDS
T03800
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hak
Halomonas sp. KO116
Brite
KEGG Orthology (KO) [BR:
hak00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hak01002
]
KO116_03328
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hak01011
]
KO116_03328
Peptidases and inhibitors [BR:
hak01002
]
Cysteine peptidases
Family C82
KO116_03328
Peptidoglycan biosynthesis and degradation proteins [BR:
hak01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
KO116_03328
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AJY51799
UniProt:
A0A0D5M5U4
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All DBs
Position
complement(3590220..3591860)
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AA seq
546 aa
AA seq
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MNERQPLRRWAIGSALCLTLTYGPLGISPVYADSASDSLQQAIAQQLSSADARQLPITEF
YQLSDGQPVWQAAAAVESLVEALNSLENDGLVPTDYDADTLLGEFQRSQSGDDAAQASFD
IKATHSLLLALDHLERGKVNPRDVEPQWDAPRPESDYSLLRVVHAVEDRALDNATALARP
SSGEYQQLRDTLKQHYQLANLGSAPYLAAREESLRPGDEADDVIVLRQRLALWGETDLMV
ADSRAYPLIDVQAASNQRVFDAPLESAVKRFQRRHLLQEDGVVGEQTRLALNTPVSARID
QLRVNLERARWIRPMQSAEPRVWVDIAGYRMHYVRPNGEHWDARVVVGSPRRETPIIHST
ISHLTINPSWTIPPTIMREDVLPRVRADINYLARQNIRVISPSGEPMVAEEIDWQRPGGV
MLRQVAGSGNPLGRVVIRFPNNDMIYLHDTPARGLFQRNQRALSSGCVRVEGVAELAQML
LQDTGSRYQFSTLLNGGSDRNVSLSQRIPIALHYLTAWPNAEGEVEFRPDIYRRDAALLA
ALQRPV
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagagacagccactaagacgatgggcgatagggagcgctctgtgtctaacgctt
acctacggccctttaggcatcagccctgtatatgcggattcagcctcagattcattgcag
caggcgatagctcaacaattaagctccgcagacgcgcgacaacttcctattactgagttt
tatcaactaagtgatggtcagcccgtgtggcaggcagcggctgcagttgagtcactggtc
gaggcgctaaacagtttggaaaacgatggcttggtgccgacagattatgacgctgatacg
ttgcttggtgagtttcagcgtagtcagtcgggtgatgatgccgcacaggcctcgtttgat
atcaaagccactcactcgctgttgctggcgctcgatcatttagagcgcggtaaggtgaat
ccgcgagacgtagagccacagtgggacgcgccgcgaccagaaagcgactactcgctgcta
cgtgttgtacatgccgttgaagatcgtgcgctggataatgccaccgcgctggccaggcct
tcgtcaggtgaatatcagcaattgcgtgacaccctaaagcaacattaccagttggcaaac
ctgggcagcgcaccctacttagccgccagggaggagtcacttcggccgggggatgaagcc
gacgatgttattgtgctgcgccagcgtttggcactctggggtgaaacggatttgatggtg
gctgatagcagggcttatccgctaattgatgtgcaagcagcgtctaatcagcgcgtgttt
gatgcgccacttgaatccgctgtgaagcgttttcagcgccgccatttactacaggaagat
ggtgtggtgggtgaacagacccggctggcgttaaatacgccggtgtcggcgcgaatcgac
caactgcgggtcaatttagaacgcgcgcggtggatccgcccgatgcagtctgccgagccg
cgagtgtgggtcgatatagccggttaccgaatgcactatgtacgccctaacggcgagcac
tgggatgcccgagtggtcgtcggctcgccgcgtcgtgaaacgccgatcatccactctact
atcagccatttaacgattaatccatcctggaccatcccgccgacaatcatgcgtgaggat
gtactgcctcgcgtgcgggcggatatcaattacttggcgcgccaaaatattcgagtgatt
agtccttccggcgagccgatggtggcagaagagatcgattggcagcgccctggcggcgtg
atgctgcgccaagtggcaggctcgggtaacccgcttggtcgtgtcgtgatacggtttcct
aacaatgacatgatctatttgcacgacacccccgcccgagggctatttcagcgtaaccag
cgcgcactcagttcaggctgtgtgcgggtagagggtgtggctgaactggcgcagatgctg
ttgcaagataccggcagccgttaccaatttagcaccctgttaaatggagggagtgatcgt
aatgtgagcttatcccagcgtatacccattgcactgcattatttaaccgcatggccgaat
gcggaaggtgaagtggagtttaggcctgatatctaccgccgtgatgcagcgctactggcc
gcgctgcagcggccagtttag
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