Halomonas sp. KO116: KO116_03585
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Entry
KO116_03585 CDS
T03800
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
hak
Halomonas sp. KO116
Pathway
hak00541
Biosynthesis of various nucleotide sugars
hak01100
Metabolic pathways
hak01250
Biosynthesis of nucleotide sugars
Module
hak_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hak00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KO116_03585
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hak01005
]
KO116_03585
Enzymes [BR:
hak01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
KO116_03585
Lipopolysaccharide biosynthesis proteins [BR:
hak01005
]
Lipid A
KO116_03585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
CdpA_N
Motif
Other DBs
NCBI-ProteinID:
AJY52052
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Position
complement(3894913..3895764)
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AA seq
283 aa
AA seq
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MASQERHINVAGLTAGNSLPLMLLGGMNVLESAELADEVAQAYVTVTQKLGMPYVFKASF
DKANRSSVHSYRGPGIEKGLQILADIKARYNVPIITDVHEPWQAEAAAEVADIIQLPAFL
ARQTDLVVAMAKTGAVINIKKPQFLAPHEMRHILSKFQEAGNDQLMLCERGSSFGYNNLI
VDMLGFGDMKQTGYPVFFDVTHALQRPGGRADSADGRRAQVAELARAGVAVGLAGLFLEA
HPDPDNAKCDGPCALPLDQLEPFLTQLAQLDALIKGFEPLTIR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcaagagcgtcatattaacgtagccggtttaaccgccggcaattccttgccg
ctaatgctgctgggcggcatgaacgtgctggaatctgctgagcttgccgacgaagttgcc
caagcctacgtcacggtgacccagaaactggggatgccctacgttttcaaggccagcttt
gataaagctaatcgcagttcggttcactcctaccgcggcccgggtatcgagaaagggctg
caaattctggccgatatcaaagcccgctataacgtgccgatcatcaccgacgtgcacgag
ccctggcaggctgaagcagcggcggaagtggccgacattatccaactgccggcttttttg
gcccgccaaactgatttggtagtcgccatggccaaaaccggcgcggtcatcaatatcaag
aagccgcagtttttggcgccccatgaaatgcgtcatatcctgagtaagtttcaggaagcg
ggtaacgaccagctgatgctctgcgagcgcggttcaagctttggttacaacaacctgatt
gttgatatgctgggctttggcgatatgaagcaaaccgggtatccggtattttttgatgtg
acccacgcgctgcagcgcccgggtgggcgtgccgacagtgctgacggtcgtcgggctcag
gtggctgaattagcgcgcgcaggcgtggctgttgggcttgcagggctgtttttagaagcc
caccctgaccctgataacgccaaatgcgatggcccttgtgcactcccgctggatcagttg
gagccgtttttaactcagcttgctcaactggatgcgctgataaaagggtttgagccgcta
accattcgttag
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