Halomonas sp. KO116: KO116_03815
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Entry
KO116_03815 CDS
T03800
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
hak
Halomonas sp. KO116
Brite
KEGG Orthology (KO) [BR:
hak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hak03021
]
KO116_03815
Transcription machinery [BR:
hak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KO116_03815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
KORA
Motif
Other DBs
NCBI-ProteinID:
AJY52282
UniProt:
A0A0D5M876
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Position
complement(4131973..4132839)
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AA seq
288 aa
AA seq
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MSTSLIPVGQLSPGGDLGGYIRAVNGISVLTADEERELAYRLYDDGDLEAARRLVMSHLR
FVVHIARSYSGYGLPQADLIQEGNVGLMKAVKRFDPNQGVRLVSFAVHWIKAEIHEFVLR
NWRIVKIATTKAQRKLFFNLRSAKKRLAWLSNDEVSAIAKDLDVKPEIVRDMEGRLSSYD
AGFDAPAGDDEESTYQAPVYFLDDAASDPATQLEDSNFEEDSTRRLQVALEGLDERSRDI
LQRRWLADSKETLHDLADVYGVSAERIRQLEKNAMKKLRQKMGEPMVA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagtcttataccggtggggcagctttcacccggcggtgatttgggcggttat
atccgcgcagtcaatggaatttcggttttaaccgccgatgaagagcgagagctcgcctat
cgtctttacgatgacggtgatctagaagctgctcggcgtttagtgatgtcacatctgcgc
tttgtggtgcacattgcgcgtagttattctggctatgggttaccgcaggcggatttaatt
caagaaggtaacgtcggcttaatgaaagccgtcaagcgcttcgatcctaatcaaggcgtt
cgtttggtctcttttgccgtgcattggatcaaagcggaaattcacgaatttgtgctgcgt
aactggcgcatcgtcaagattgccaccaccaaagcgcaacgtaagttgttcttcaacctg
cgtagcgcgaagaagcgcttggcgtggctgagcaacgacgaagtgtccgccatcgccaag
gatctcgacgtcaagcctgagatcgtgcgcgatatggaagggcgtctctcctcttacgat
gccggtttcgatgcgcccgcaggcgatgatgaagagagtacctatcaggcgccggtgtac
tttctggatgacgcagcatcagaccctgccacgcagttggaagatagtaacttcgaggaa
gactcgacgcgtcggttgcaggtcgctcttgaggggcttgatgagcgctcgcgggatatc
ctacagcgccgctggttagccgatagtaaagagacactgcacgacctggccgatgtctat
ggggtcagcgctgagcgtattcgtcagcttgaaaagaatgcgatgaaaaagctgcgccag
aaaatgggcgagccgatggtagcctaa
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