Halomonas sp. KO116: KO116_03858
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Entry
KO116_03858 CDS
T03800
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
hak
Halomonas sp. KO116
Brite
KEGG Orthology (KO) [BR:
hak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hak03019
]
KO116_03858
Messenger RNA biogenesis [BR:
hak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KO116_03858
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Ortholog
Paralog
GFIT
Motif
Pfam:
TraI_2
HD
HDOD
Motif
Other DBs
NCBI-ProteinID:
AJY52325
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All DBs
Position
4176674..4177627
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AA seq
317 aa
AA seq
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MKRLDNVPTHLSRTFKGTYRLTGRVVEFDNAKTPFLKLRLSDCVGDQIAMLNLSKTTVPE
RIGHLDFVTASGVKCLSGQFILDEFRRASRDEVTSMDTLQSLPRVYSPMPEVFDKLVATV
QSLQSDCLRAFLTRVLERKDRLEAFLNAPASVNYHHAYPGGLLQHSLEVANHSVAMLRLN
EPTMPRLMQEACFVGGLLHDIGKTYTYDSKGKPNAAWKLCSHDVFTLEACAYGLAYLDAH
EPDIAMTLRHVWTCGSPGARYGQPAAMTLARYIRDADGQSAMADNQQRAFRHQTSRGFGR
LGQNLFWQPQLYAAASH
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggcttgataacgtccctactcatctgtctcgtaccttcaagggcacttatcgc
cttactggacgcgtggtggagttcgacaacgcgaaaacgcctttcttaaagctgcggcta
agcgattgtgtgggggatcaaatcgcgatgctcaacttgagcaaaacaacagtacctgag
cgcatcggccatctggactttgttaccgcctccggcgtgaagtgtttgtcaggccaattc
attcttgatgagttccgcagggcgtcccgggatgaagtgacctctatggataccctgcaa
tcgttgccacgggtgtactccccgatgccagaggtattcgataagttagtcgcgaccgta
cagtcgcttcaatcagactgccttcgagcgtttttgacgcgggtactggaacgtaaggat
cgtcttgaagcttttttgaatgcgcccgccagcgtaaattatcaccatgcgtacccaggt
ggtttgctacagcattcgctggaagttgccaatcactcggtagcgatgctgcgtcttaac
gaaccaaccatgcctcgtctcatgcaggaagcctgtttcgtgggagggctgttgcacgat
attggcaagacatacacctacgactccaaaggcaagccaaacgctgcgtggaagctctgt
agccatgatgtgtttacgctagaggcgtgtgcctacggacttgcatacctggatgctcat
gaacccgatattgcaatgacacttcgccatgtgtggacgtgtggttcgccaggtgcgcgc
tacggccagcctgcggcaatgacgttggcccgttatattcgtgacgcggatgggcaaagc
gcgatggccgataaccaacagcgggcttttcgtcatcaaactagccgggggttcggccga
ctcggtcagaacctcttttggcaacctcaactatatgctgctgcatctcactaa
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