KEGG   Halomonas sp. KO116: KO116_04138
Entry
KO116_04138       CDS       T03800                                 
Name
(GenBank) CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
hak  Halomonas sp. KO116
Brite
KEGG Orthology (KO) [BR:hak00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hak02048]
    KO116_04138
Enzymes [BR:hak01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KO116_04138
Prokaryotic defense system [BR:hak02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    KO116_04138
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 DEAD ResIII Helicase_C FOXO-TAD USHBP1_PDZ-bd
Other DBs
NCBI-ProteinID: AJY52599
LinkDB
Position
complement(4472614..4475289)
AA seq 891 aa
MIYYHYWGKAQAKGQSVECHLLPYHNLDVAAVGWLLLSPDRPLTQRLAAQLSLEPEVLRQ
LLVFWLGLHDIGKFSRTFQGLFQPVSSLALVPPAAQYAYTERHDRLGDVVWEAKWLDWFE
DGTLQWSVSLTRAERKALRAAFSVLSPPFFGHHGQPVSAGNIDIERFFCRDEHADDVEAT
RQFIADWANVVPPEWPIEQLFSEEWVYALQTLSWSIAGWATLSDWLGSNQDHFPYCQKRI
PLADYWQIALHNAEKALEETGFNKFSEPLPYAGMADWFDKQSITPTPLQHAAETVALTDG
PQLFILEDVTGSGKTEAACILTQRLLAAGHGDGLYFALPTMATSNAMYSRLGNLHRRFYT
ADSSPSFVLAHGARDLNDDFVAAVAATQPADLDYTASELSATSRCNQWLADSRKKALLAE
VGVGTIDQALMAILPFRHQSMRLYGLARKVLVIDEVHAYDNYMQTLLSQLLAYHARQGGS
AILLTATLPRAMRSALMAAWQTGLGQPATKPQKDDFPLLTHVSEGQPLELPLGSRKEVSR
SVEVAWLTEEEQAIEAVIEVVEAGECIAWVRNTVDDAIRAFEAIAARHPEPERCLLFHSR
FAMVDRQRIESQVIERLGKDSTPEVRKGQVLVSTQVFQESLDCDVDVMISDIAPIDLLIQ
RAGRLQRHQRGARCLPRLLVLAPPWAEDPDEHWLKRTLPGTQAVYRDTSLSWLTQRELRR
LEAIRMPEEARDLIEGVYGPVSDDIPDALQAARYEQKGMQRTAGSMANFNALNLEEGYVK
SDQWQEEQEIGTRLMDEPTVNVVLLSLTDDNELALWAGARRHADMLSQVKLRQSQAAKLV
TLPSRYESQWLALQERYKALKYTQPWLPGDDAACDYDTQWGVRLGGKEKAP
NT seq 2676 nt   +upstreamnt  +downstreamnt
gtgatttactatcactactggggtaaagcgcaagctaaagggcagagtgtagagtgtcat
ctattgccgtatcacaacctagatgttgctgcggtgggctggttgctgctttcgccggat
agaccgctgacacaacgtctggcagcgcaactgagtcttgaacctgaagtgctacgtcag
ctattggttttttggttgggcttgcacgatatcggtaagttctcccgaacttttcagggg
ctttttcaacccgtctcaagcttggcattagtccctcccgctgcgcaatatgcctatacc
gagcgccatgatcgcttgggtgatgtggtttgggaggctaaatggctagactggtttgaa
gatggcacgttgcagtggtcagtaagcttgacgcgcgctgagcgcaaagcgcttcgcgca
gctttttctgttctctcaccacccttttttggccatcacggtcagccagtaagcgcaggc
aatatcgacatagagaggtttttctgtcgtgatgaacacgctgatgatgtagaagcaacg
cggcagtttattgccgattgggccaacgtcgttccgccagagtggccaatcgagcagctg
ttttcagaagaatgggtttatgccctgcagacgctaagctggtcaatcgcaggctgggca
actttaagtgactggctgggctcgaaccaggatcactttccctattgtcagaagagaata
ccgctcgccgattattggcaaattgcgttacacaatgctgagaaagcattggaagaaaca
gggtttaacaagttttccgaaccgttgccttacgcaggtatggccgactggtttgacaag
caatccatcacgccaacgcccttgcagcatgccgccgagacagtagctctcacggatggg
ccgcagctgtttatcttggaagatgttaccggttcaggaaaaaccgaagccgcctgtatt
ctgactcagcgcctattagcagcaggacacggcgatgggctctattttgcactgcccacg
atggcaacctctaacgccatgtactcacggctgggcaatttgcatcgccgcttttatacc
gctgactcttctccctcctttgttctcgcccatggtgcgcgggatttaaacgatgacttt
gtcgccgccgttgccgcgactcagcctgctgatttggattacaccgctagcgagctctct
gccaccagtcgctgcaatcaatggctagcggattcgcgtaaaaaggcgctgctggcagag
gtgggcgtaggcaccatcgaccaagccttaatggccattttaccgtttcgccaccagtcg
atgcgtttgtacgggctggcgcgcaaggtattagtgattgacgaggttcacgcctacgac
aattacatgcaaacactgcttagccagctgttggcctaccatgcccggcagggcggtagc
gcgattctgctaactgccacgcttccccgcgccatgcgcagtgccttaatggctgcctgg
caaacgggacttggccagccagcaacgaaaccacaaaaagatgactttccgctactgacc
catgtgagcgaagggcaaccgttggagctgccgctaggatcgcgcaaagaggtgtccaga
agcgttgaagtcgcttggctaaccgaagaggagcaggcgatagaagcggtgatagaagta
gtggaggccggtgagtgtatcgcttgggtgcgcaatacagtagatgacgctattcgcgca
ttcgaagccattgctgctcgccacccagagcctgagcgctgcctactgtttcacagccgc
tttgcaatggtcgataggcagcgcattgagtcccaggtcatcgagcggttaggtaaagac
tcaacgcctgaagtgcgtaaggggcaagtgttggtcagcacgcaggtatttcaggaatcg
ctggactgtgacgtggatgtgatgatcagcgatatcgcacccattgatctacttatccag
cgggcagggcgattacaacgccatcagcgtggagcgcgctgcctgccgcgcctgctggta
ctagcgccgccctgggcggaagatcccgatgagcattggctcaagcgcacgctgccaggc
acccaggcggtttatcgcgacacatcgttaagctggttaactcagcgggagctgcgtcgt
ttggaagcaatccgtatgcccgaagaggcgagagatcttattgaaggtgtttacggcccc
gtatctgacgatattcctgatgctctgcaggcagcgcgctatgaacaaaaaggaatgcag
agaacggcgggctcgatggcaaacttcaacgcactcaaccttgaagagggctatgtaaaa
agcgatcagtggcaggaagagcaagagataggcacaaggctgatggacgagcccacggtt
aatgttgtgctgctgtcactcaccgatgataacgagctggcgctctgggcgggtgcgcgc
cgccatgccgatatgcttagccaggtgaagctacgccaaagccaggccgccaagttggta
acactgccaagccgttatgaaagccagtggcttgcccttcaagagcgttataaagcgctg
aagtatacccagccctggctgcccggtgatgacgctgcttgtgactacgacacccagtgg
ggagttaggctaggtggtaaggagaaagcgccatga

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