Halomonas sp. KO116: KO116_04210
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Entry
KO116_04210 CDS
T03800
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hak
Halomonas sp. KO116
Brite
KEGG Orthology (KO) [BR:
hak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hak03400
]
KO116_04210
Enzymes [BR:
hak01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
KO116_04210
DNA repair and recombination proteins [BR:
hak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
KO116_04210
Prokaryotic type
KO116_04210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AJY52671
UniProt:
A0A0D5M936
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All DBs
Position
4539919..4541346
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AA seq
475 aa
AA seq
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MTEKPMKRQLVWLRSDLRIDDNSALAAAAAKGPVIAVFLRSIPQWQEHGHGANKLDFWAR
GVAAVKTALNGLNIPLLHRDIGRYDQAPEALLDIAREYDIEQLHFNYEYALNERHRDQAV
QDAFKQAGIAAHGCHDAMAFAPGSLLTGKGDYYGVFTPFSKAWHKQVTADQLALRESPPV
QTELDIKSDPLPALPTLDSTPIEERLWPAGERPAADNLARFLRFRGRHYKDQRDQPKVRG
TSELSPYLALGMISHRQCLQAVMTENGGHLGDGDIGLTTWVNELIWREFYQHVAVGFPEV
CRYQPFQEHTKQLKWRDDDEGFQAWCEGRTGYPIVDAAMRQLVATGWMHNRLRMVTAMFL
SKHLLIDWRRGEAFFMRHLVDGEFCANNGGWQWAASTGTDAAPYFRIFNPTTQSTRFDAD
GEFIAHWLPELADLPAKARHAPPQDLLTDVQYPAPIVDHKAARQRALDTFKSLTK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaagcctatgaaacgtcaattggtttggctgcgcagcgacttgcgtattgat
gacaacagtgccctggctgccgcagcggccaaagggcctgtcatcgcggtttttttgcgc
agtattccccagtggcaagagcacggccatggtgccaataagctggatttttgggcgcgc
ggtgtcgccgccgttaaaacagcccttaacggattgaatattccgctgctgcatcgcgac
attggccgctatgatcaggcccccgaggcactgctcgatatcgctcgtgagtacgatatt
gagcagttgcacttcaattacgagtacgccctcaatgagcgccaccgcgaccaggctgtg
caagacgcctttaagcaggccggtattgccgcccatggctgccacgatgccatggcattt
gcccccggcagcctgctaaccggcaagggcgactactacggggtatttacgccgttctcc
aaggcgtggcacaagcaggtcaccgccgaccagttagcgctgcgcgagtcaccaccggtg
caaacagaactggatattaaaagtgatccgttgcctgcgctaccgacccttgacagcaca
ccgatagaagagcgcctgtggcctgccggtgaacggcccgcggcggataacttggcgcgt
ttcctgcgctttcgtggccgccactataaagaccagcgcgaccagcccaaggtacgtggt
accagcgaactctcgccctatctggcactaggcatgatctcccatcgccagtgcttgcaa
gccgtaatgaccgagaatggcggtcatcttggcgatggcgatattggcctgacaacctgg
gttaatgaactgatctggcgtgaattttatcagcatgtcgcggtggggtttcccgaggta
tgccgctatcagcccttccaggagcacactaagcagttgaagtggcgtgatgacgatgaa
ggctttcaagcctggtgcgaagggcgtaccggctatcctatcgtcgatgctgccatgcgc
cagttagtcgccaccggttggatgcataatcggctgcgcatggtgaccgcaatgttttta
agtaagcacctgctgattgattggcggcgcggtgaagccttttttatgcgtcacttggtg
gacggcgaattttgcgccaacaacggtggctggcagtgggctgcttctacgggtaccgat
gccgcgccttactttcgcatctttaaccctaccactcagtcgacccgctttgatgctgac
ggtgaatttattgcccactggctgcctgagcttgctgatctgcctgccaaagcgcgccat
gcgccgcctcaagacctactcaccgatgtgcaatacccagcgccgatcgttgatcacaaa
gcggcacgtcaacgtgcactggacacgtttaaatcactcactaaataa
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