Halomonas sp. KO116: KO116_04296
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Entry
KO116_04296 CDS
T03800
Name
(GenBank) DNA gyrase B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hak
Halomonas sp. KO116
Brite
KEGG Orthology (KO) [BR:
hak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hak03032
]
KO116_04296
03400 DNA repair and recombination proteins [BR:
hak03400
]
KO116_04296
Enzymes [BR:
hak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KO116_04296
DNA replication proteins [BR:
hak03032
]
Prokaryotic type
DNA Topoisomerases
KO116_04296
DNA repair and recombination proteins [BR:
hak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KO116_04296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AJY52757
UniProt:
A0A0D5M9I1
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All DBs
Position
complement(4644443..4646863)
Genome browser
AA seq
806 aa
AA seq
DB search
MSEQAYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFELVDNSIDEALAGHCSEI
RVVIHPDESVTVSDNGRGVPTELHEGEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSAELRLTIWRQGEVFEQMYHHGVPQAPLGVVGKTEKSGTRVHFRPSPETFGNI
EFHFDILAKRLRELSFLNSGVAIRLFDERSGKEELFHYEGGLKAFVDHLNTNKSVINPVF
HFNAIREDGVEVEVAMQWSEAFTENIFCYTNNIPQRDGGAHLAGFRAGLTRTLNNYIEAE
NLLKKAKVNTTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMSRLFSEY
LVEKPNEAKAIVNKMLDAARAREAARKARDMTRRKGALDIAGLPGKLADCQEKDPSQSEL
YLVEGDSAGGSAKQGRDRRTQAILPLKGKILNVEKARFDKMLSSAEVGTLITALGCGIGR
EEFNPDKLRYHSVIIMTDADVDGSHIRTLLLTFFFRQMPELIERGHIFIAQPPLYKIKRG
KQELYLKDEQAMVDYLTTTALDGAGLHVNANAPGISGSQLETLVNQYRNVMKRIDRLSRV
YPNEVLKQIIHTSALKGEESLKDRVTMQNWIDEIQKTMDDMVAYEGGPRYHFHLQEDSER
GLFLPTVSLVAHGVTTEYTWGLDFFESADYRGIAELGETLDGFLEEGAFIARGERQKPVS
HFSEVLAWLMQEGQRGLSVQRYKGLGEMNPDQLWDTTMDPDSRRMLRVTIEDAVGADMMF
NTLMGDDVEPRRDFIETNALVANLDV
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcaggcttacgattcatcaagcattaaggtgctcaaggggctggacgcagtg
cgtaagcgtccaggaatgtatattggtgacaccgacgacggtaccggtctgcaccacatg
gtcttcgagttggtggataactccatcgatgaggccttggctgggcattgcagcgaaatt
cgcgttgtcattcacccggatgagtcagtcaccgttagtgataacggccgcggcgtaccc
actgaacttcacgaaggcgagggggtgtccgctgctgaagttatcatgacggtgctgcac
gcaggcggcaaattcgacgataactcctataaagtttctggtgggttacacggcgttggc
gtttctgttgtaaacgcactgtctgccgagctgcgcttgaccatttggcgccagggcgaa
gtgtttgaacagatgtaccatcacggtgtgcctcaagcaccgttgggcgttgtgggcaaa
accgaaaaaagcggtacccgcgtccattttcgcccttcccctgaaacctttggcaatatc
gagttccatttcgatattcttgccaagcggttgcgtgaactctctttcttgaattccggt
gttgcgatccgattgttcgatgagcgcagcggtaaagaagagctattccattacgaaggc
ggcttaaaagcctttgttgatcacctgaataccaataaaagtgtcattaacccggtattc
cactttaacgctattcgtgaagatggcgttgaagttgaggtggccatgcagtggagcgaa
gccttcactgaaaatattttttgctacaccaataatattcctcagcgagacggtggcgcg
cacttggcaggcttccgagcggggcttacccgtacgctcaataactatattgaagctgaa
aacctgctcaaaaaggccaaggtcaataccaccggtgacgacgcccgtgaaggcttgact
gcgattatttcggtcaaagtgccggatcctaaattttcgtcgcaaacgaaagataaacta
gtctccagcgaagttaagactgccgttgagcaggagatgagccgcctgttttctgagtat
ctggttgaaaaacctaacgaagctaaagcgatcgttaataagatgctggatgcggcgcgg
gcgcgtgaagccgcccgcaaggcgcgtgatatgacccgccgtaaaggcgcgctggatatt
gccggcctgcccggtaagctggcggattgccaggaaaaagatccaagccagtctgaactc
tacctggtggagggtgactcggcagggggtagtgccaagcagggccgtgaccggcgtacc
caggctattttgccgctcaagggtaaaatcctgaacgtcgaaaaagcacgttttgataaa
atgctttcttcagctgaagtaggcacgttgattactgcacttggttgcggcatcggccgc
gaagagttcaaccctgataagctgcgctaccactccgtcattatcatgaccgatgcggac
gtggatggctcacatattcgtacgctattgctgacgttctttttccgtcagatgccggaa
ctgatcgagcgtggccatatcttcattgcccagccgccgttgtataaaatcaagcgcggt
aagcaagagctctatctgaaagatgagcaggcgatggtggattatttaaccaccacggcc
ctggacggcgctggattacacgttaatgccaatgcaccaggcatctcgggttctcagtta
gaaacgctggtaaaccagtaccgtaacgtcatgaaacggattgatcgcttgtcacgggtt
taccccaatgaagtgctcaagcagatcattcatacgtccgcgcttaaaggtgaagaaagc
ctgaaagatcgcgtaaccatgcagaactggattgatgaaattcagaagaccatggatgac
atggttgcctatgaaggtggtccgcgttatcacttccaccttcaagaagattctgaacgt
ggacttttcctacctaccgtctcgctggtggctcatggtgtaaccacagagtacacgtgg
ggactcgacttctttgaaagcgctgattatcggggcatcgctgagttgggcgaaacgctg
gatggcttccttgaagagggcgcgtttattgcccgaggggaacgtcaaaagcctgtatct
cacttctccgaagtgctggcatggctgatgcaagagggccagcgtggtctatcggtgcag
cgttataaaggtctgggtgaaatgaatccagatcagctttgggataccaccatggatccc
gatagccgccgaatgctgcgggtgacgatcgaagatgcggtgggtgctgacatgatgttc
aacacgctgatgggtgatgacgttgaaccacgtcgcgacttcatcgaaaccaatgcgcta
gtggctaacctagacgtataa
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