Hemitrygon akajei (red stingray): 140713615
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Entry
140713615 CDS
T11019
Symbol
atxn1a
Name
(RefSeq) ataxin-1a isoform X1
KO
K23616
ataxin 1/1L
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
140713615 (atxn1a)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
140713615
NCBI-ProteinID:
XP_072880035
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Position
20:17587812..18066115
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AA seq
779 aa
AA seq
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MKSNQERSNECLPPKKREFPVSSLPLAEKAVAAATASESSRSENLAWLANVASSQSSVGV
KYGHAKVAGETSVETGLPLYKSLPTAVDYSSPGNVRPAPGVTQLRAVYSSSALAQPGSSS
SPVEYAHLQPAATFQFVGPPFSTPYVGSPPFVPSQLISPTASNASVAPTQYSQLEPYSTI
FASMGSPSQHKVEHQIVRPRREIPGSPSPSVQNQYVQISSSSPNVTRPHSPTTVPLHLHS
HPSVIPHTLTVSTPSPMVLQYSDAGYPVGSRETIRKVDDIRPHLVPRREVLNGEIEKSRR
YALSPSTELNLEKSGAKPVSRHYEIRHGTHVVVHPSPADYTAQENLGSRASVMIIPNSHT
PTTDLEVQQAIDSDNSPLALYDKANLNHGKATFSPQSVIQTTHTPTDHLSIGLPASAVYP
GSQQPLIGYISSQQQALSYHGNLQQHVVIPGTHPLLIPVCSTAVEASGVTSTIVTTSPQF
AAVPHPFVSTASPKSENYHPQSLTTQPTYHTTVVQAQVHLPVVQSVSSPVAASNQLPPYF
MKGSIIQLANGELKRVEDLKTEDFIQSAEISSDLKIDSSTVERVEGSHISSFAVLQFAVG
EHRTQVSVEVLVEHPFFVFGKGWSSCCPERTSQLFGLPCSKLSVGDVCISLTLKNLKNGS
INKGQAIDTTGALLKHPKNYSITGSRPRYLERENGIVQGNVPVVSENGKLFSETITVQSA
KSWLNKTEVGRPSTRKRRWSAPETRKVEKTEEQPLNLPKPSFIPQEVKICIEGRSNIGK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgaaccaggaacgcagcaatgaatgtttaccgcccaagaaacgtgaatttcct
gtcagcagcctgcccttggcagagaaggcagttgcagcagctactgcaagtgagagcagt
cgcagtgaaaacttggcatggcttgccaatgtagctagcagccaaagcagtgtgggcgtg
aagtatggacatgccaaagtagcaggagaaacctcagtggaaactggcttaccactgtat
aaatcactaccaactgcagtggactattcatcgcctgggaatgttagaccagctccaggg
gtaacacaacttcgagctgtttattcatcttcagcattagctcagccagggtcttcttcg
tcacctgtggagtatgctcatctgcagcccgctgctactttccagtttgttgggccacct
tttagtacaccatatgtaggatctcctccatttgtcccctcccagttgatctccccaaca
gcttctaatgcttctgttgctccaactcagtattcccaactagaaccctactctacaatt
tttgccagtatgggcagcccatcccagcacaaggtggaacatcagattgtcaggccacgc
agagagattccaggatcaccttccccctcggtgcaaaaccagtatgtgcaaatttcaagt
tcgtctcccaatgtgacaaggccccactctcctactacagtccccttgcatttgcactct
cacccgtcagtgattccacacactctgacagtcagtacaccgtcaccaatggttctccag
tactcagacgccggataccctgttggatcaagggaaaccatcaggaaggttgatgacatc
agaccgcatttggttccaagaagggaagtattaaatggtgaaattgagaaaagtaggaga
tatgctctttcacccagcacggaattgaacctggaaaagtcaggagccaaaccggtttct
cggcactatgaaataaggcatgggacccatgtggttgttcacccaagccctgctgactac
actgcacaagaaaatttgggctctagagcttcagtaatgattatacccaacagtcacaca
ccaactacagatttggaggtccaacaggccatagacagcgacaactctcctttggcattg
tatgacaaagccaacttaaatcatggaaaggcaactttttctccacagtctgtcatccaa
accacccatactcccactgaccacctttctataggactacctgctagtgccgtttatcct
ggttctcaacagcctcttattggttacataagcagtcaacagcaagcactaagttaccat
gggaacctgcagcagcacgtagtaattccaggcacccacccacttcttattcctgtatgc
agtacagcagttgaagcttcaggggtgacctctacaatagtgacaacatctcctcagttt
gctgcagtgcctcatccatttgtcagcacagctagtcccaagagtgagaactatcatcct
caatcacttactacacagccaacttaccacacaactgttgtgcaggctcaagtgcatctg
ccagtagtacagtcagtgagttctccagtcgcagcttctaatcaactgcctccctacttc
atgaaaggatcaatcatacagttagctaatggagagctaaaaagagttgaagatttaaaa
acagaggacttcatacaaagtgctgaaatcagcagtgatctgaagattgactctagcact
gtggagcgtgttgaaggcagtcacatctccagttttgctgttctgcagtttgcagttgga
gaacacagaacacaggtcagtgttgaagttctggtggaacatcctttttttgtttttgga
aaaggctggtcatcatgttgtccggagagaacctcccaactatttggcttgccatgttcg
aaactttctgttggcgatgtttgcatatctctcacactgaaaaatctgaaaaatggctct
ataaataaaggacaggctattgacacgactggtgctttgttgaagcacccgaagaattat
agtataactgggagcaggccccgatacttggagcgggagaacgggattgttcagggaaat
gtacctgttgtttcagagaatggcaaattgttttctgaaaccattacagtacaatctgca
aagtcttggctcaacaaaacagaggttggaaggccttcaacaagaaaaagaaggtggtct
gctcctgaaacacgaaaagtagagaagactgaagagcagccattgaatcttcccaagcct
tccttcattcctcaggaggttaagatttgcattgaaggacggtccaacataggcaagtga
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