Hemitrygon akajei (red stingray): 140713639
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Entry
140713639 CDS
T11019
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140713639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
haka04121
]
140713639
Enzymes [BR:
haka01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140713639
Ubiquitin system [BR:
haka04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140713639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_5
NHL
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
140713639
NCBI-ProteinID:
XP_072880110
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All DBs
Position
20:complement(22367822..22429792)
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AA seq
414 aa
AA seq
DB search
MSYVLRDRCPCEDVWEWEGLPMENPAAAFTEPMALRTARSLAQDIRINVLECKVCFEHYG
DNTACRPCVLPCGHVVCRHCAQTLTRAGELQCPFCRRCGPSSLAADCLPLLQLAEMLGPE
QGGSSGLPSQLRLITVYGGWGQLLNPRALAVCPELLAVADDSSRPVRLWERGERWLESDV
EATGLVYPLGVALAGGGQLLLVTDGGDSSLKVFALGQSRKPAVVQDNFGLPWGVAAGLSI
SQVVLTDAGRGSLLLLSLRLPGGALLGTESVCEGLRYPREVAVCPRQGCIHVVEHLLPPG
SSAAVRLKTFNSRHQLIRQLDSTGVSPVARIPAGLSAIAVDADGNVLVADGLDGTVGRVG
VPGTRQYSILVDQGLIRPTGLACTADGELMVLDGGDNTWKVYADLSMPPARELS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatgtcttgagggatcggtgcccttgtgaggacgtctgggaatgggaagggctg
ccgatggagaacccggctgcagcgttcaccgagccgatggccttgcgcaccgcccgcagc
ctggcgcaggatatcaggatcaatgtgctggagtgcaaagtctgtttcgagcactacggc
gataacacggcatgccgaccctgtgtgctgccgtgtgggcatgtcgtgtgccgccactgc
gcccagactctgacccgggccggagagctgcagtgcccgttctgccggcgctgtgggccg
tcgtcgctggccgccgactgcctgccgctgctgcagctcgcggagatgctgggcccggag
cagggcggcagcagcggtttgccctcgcagctccgactgataacggtgtacggaggctgg
ggccagctgctcaatcccagggcgctggccgtgtgccccgaactgctggcagtggctgat
gacagttcccggccggtgcggctttgggaacggggcgaacgctggctggagtccgacgtc
gaggccacggggctggtgtacccgctgggcgtggcgctggccggcggcgggcagctgctg
ctggtgacggacggcggcgactcgtctcttaaggtgttcgctttgggtcaaagccggaaa
cctgccgtcgtccaggacaacttcggtctcccgtggggtgtggctgctggtctgagcatc
agccaggtggtactgactgacgccgggcgaggctctttactactgctgagcctgcggctg
cccggcggtgccctgctgggtaccgagagcgtgtgcgaggggctgcgctacccccgggaa
gtggccgtgtgcccgcggcaaggctgcatccacgtggtggagcacctcttgccgcccggc
tcctccgccgctgtccgcctcaaaaccttcaacagtcgccaccaactgatccgccagctg
gacagcaccggcgtcagcccggtcgcccgcatccctgccggactctccgccatcgccgtg
gatgccgatggcaacgtgctggttgccgacgggctggacggtacggtgggtcgtgtaggt
gtccctgggacccgccagtacagcatcctcgtggaccagggtctgatccgcccaacaggg
ctggcatgcaccgctgacggcgagctaatggtgctagacggtggagacaacacgtggaag
gtgtatgctgatctctccatgcctcccgccagagagctgtcctga
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