Hemitrygon akajei (red stingray): 140714087
Help
Entry
140714087 CDS
T11019
Symbol
tpm1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04260
Cardiac muscle contraction
haka04261
Adrenergic signaling in cardiomyocytes
haka04814
Motor proteins
haka04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
140714087 (tpm1)
04820 Cytoskeleton in muscle cells
140714087 (tpm1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
140714087 (tpm1)
04261 Adrenergic signaling in cardiomyocytes
140714087 (tpm1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
haka04812
]
140714087 (tpm1)
04147 Exosome [BR:
haka04147
]
140714087 (tpm1)
Cytoskeleton proteins [BR:
haka04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
140714087 (tpm1)
Exosome [BR:
haka04147
]
Exosomal proteins
Exosomal proteins of microglial cells
140714087 (tpm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
CCDC39
TMF_DNA_bd
PUMA_CC
DUF745
Sec2p
Rod_CreS
FKBP15
DUF3450
ATG16
Lebercilin
XhlA
Laminin_I
HAUS1
DUF1664
CC_Bre1
SlyX
DUF16
Motif
Other DBs
NCBI-GeneID:
140714087
NCBI-ProteinID:
XP_072880915
LinkDB
All DBs
Position
21:complement(12038467..12083333)
Genome browser
AA seq
284 aa
AA seq
DB search
MEAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKQTEDELDKY
SEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAELSESKSAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAE
FAERTVAKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaggccattaagaaaaagatgcagatgttgaagctggacaaggagaatgccttggac
cgcgccgagcaagcagaggcagacaagaaggcagccgaggacagaagcaagcagctggag
gatgagctggtgtcgctgcagaagaagctgaagcagactgaggacgagctcgacaagtac
tcggaagctctgaaagatgctcaggagaagctggagctggctgagaagaaagccaccgat
gctgaagccgatgtcgcctctctgaacagacgcatccagctggttgaggaggagctggac
agggcccaggaacgtctggctacagctttgcagaaactggaggaagctgagaaggctgca
gatgagagtgaaagagggatgaaggttattgagaacagagccctgaaagatgaggaaaag
atggaactgcaggagatccagcttaaggaggctaaacatattgcagaggaggctgaccgc
aaatatgaagaggttgcccgtaaactggtcattattgagagtgacttggagcggactgag
gagcgagctgagctctctgaatctaaatctgctgagcttgaagaagagttgaaaactgtg
accaacaaccttaagtcactggaggctcaggctgagaagtactcacaaaaggaagacaag
tatgaggaggaaataaaggtcctaagtgacaaactgaaagaggctgaaacccgtgctgaa
tttgcagagaggactgttgccaagttggaaaaatccatcgatgacttggaagatgagttg
tatgcccagaagctgaagtacaaggccatcagtgaggaattggaccatgctctcaacgat
atgacatcaatataa
DBGET
integrated database retrieval system
