Hemitrygon akajei (red stingray): 140714134
Help
Entry
140714134 CDS
T11019
Symbol
sin3aa
Name
(RefSeq) SIN3 transcription regulator family member Aa isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
140714134 (sin3aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
haka03036
]
140714134 (sin3aa)
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
140714134 (sin3aa)
REST complex
140714134 (sin3aa)
Heterochromatin formation proteins
Other heterochromatin formation proteins
140714134 (sin3aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
140714134
NCBI-ProteinID:
XP_072881041
LinkDB
All DBs
Position
21:19549201..19678720
Genome browser
AA seq
1283 aa
AA seq
DB search
MKRRLDEQETAYASQQRRIASSAETFSHQHRVLAPAPPVYEAVSENMQPTAGIQYSVTPG
YQVSAMPQSSGSHSHTPAVHSGHHHTAPVPPHGQQVVSQSHAHPPGAPATPVQGQQQFQR
LKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQITPQHAAQPQSQQQHQQQPQQHTAPAPAQP
APQPPPAKITKPLQSQTHTPTSQPNAVMAPYASPRSPPVQPHTPVTSAHTTTPPMQNNQP
VEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQ
VARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKADSVRNDHGSTVKKPQLNNNKQRSN
QNGCQIRRHSGSAATPPVKKKPKMLGLKDQSLAEVNKHGAGTETLFFEKVTEFDFKSVRK
ALRSAEAYENFLRCLVIFNQEVISRAELVQLVFPFLGKFPELFVWFKNFLGYKESSHIEA
FPKERATEGIAMEIDYASCKRLGSSYRALPKSFQQPKCTGRTPLCKEVLNDTWVSFPSWS
EDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLETVQKKLSRMSADDQAKFR
LDNTLGGTSEVIHRKAIQRIYADKAADILDGLKKNPGVAVPIVLKRLKAKEEEWREAQRG
FNKIWREQNEKYYLKSLDHQGINFKQNDTKTLRSKSLLNEIESIYDERQEQASEDHAHVP
SGSHLTFVYEDKQIMEDAASLIIHHVKRQAGIQKEDKYKIKQIIYHFIPDLLFAQRVELS
DVEDEKEDEEDEEMDIDESTGATKKHNGIAGSPPKPKLMFNNTGAQKLRGMDDVYNLFFV
NNNWYIFIRLHQILCSRLLKIYNQAEKQIEEECRERDREMLTGKRDKNDSPAIQLRLKEP
MDIDVEDYYPAFLDMVRNLLDGNMDSSQYEDTLREMFTIHAFIAFTMDKLIQSIVRQLQH
IVSDEICIQVTDLYLMESGNCATGGPLATTSSRTAIESNYQRKAEQLMSDENCFKLTFIH
SRDQVSLTIDLLDTEEENSDDPVEAERWSDFLDRYMNSDSTSPELREHLAQKPVFLPRNL
RRIRKCQRGREQQEKEGKECSNKKSIENAENYDKAQCNFKLNSYKMVYVFKSEDYMYRRT
ALLRARQSHERVSTRLHQRFQAWVDKWSKEHVTREMAAETSKWLMGEGLEGMVPCTTTCE
KETLHFMKINKYRVKYSALFKGP
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtcgactggatgagcaagaaacagcttatgcgtctcagcaacgtcggattgca
agcagcgctgaaacgttttcacaccagcatcgagtactagcccccgcaccccctgtctac
gaggcagtatcagagaacatgcagccgacagctggcattcagtactcggtcacaccagga
taccaggtttcagcaatgcctcaaagctctggcagtcacagccatactccagctgtacat
agtggccaccatcatactgcaccagttccccctcatggacagcaggtggtatctcagagc
catgctcatcctccaggagcaccagccacaccagtccaaggacagcagcagttccagagg
ctaaaggtggaagatgctttgtcatatcttgaccaggtgaaattgcaatttggaaaccag
cctcaggtttacaatgactttctagatattatgaaggagttcaagtctcagagcattgat
acccctggggtgattagccgggtatctcagctcttcaaagggcaccctgacctcattatg
ggcttcaacaccttcctgcctccaggctacaaaattgaggtgcagactaatgacatggtg
aatgtgacgacacctggacaagtccatcagatcactccgcagcatgctgcccagccacag
tctcagcaacagcaccagcagcaaccccagcagcacactgcccctgcaccggcacagcca
gcaccacagccaccaccggccaaaatcaccaagcctctacagtcacagacacatacacca
accagccaaccaaatgcagtaatggctccgtatgcttctcctcggtcacctccagtgcaa
cctcacaccccagtcacgagtgctcacaccaccacaccacccatgcagaacaatcagcct
gtggagttcaatcatgccatcaactatgtcaacaagatcaaaaaccgcttccaggggcag
cctgacatctataaggcctttctggaaatcctacacacataccagaaggaacaacggaat
gcaaaagaagctgggggaaattacacgccagcattgactgagcaggaggtatatgcccaa
gtagcaaggctctttaaaaaccaggaagaccttctgtcagaatttggccagttcctacct
gatgccaacagctcagttctgctgagtaagacaacagcagagaaagcagactcggttagg
aatgatcatggcagcacagtgaagaagcctcagttgaacaataataagcaaagaagcaac
cagaatgggtgtcagattcggcgccactcaggctctgcagccactccacctgtgaaaaaa
aaaccaaagatgttgggattgaaagaccagtccctggctgaggtcaataaacatggagct
ggaacagaaactttattctttgaaaaggtgactgagtttgacttcaaatcagttcgtaag
gcgctacggagtgcagaggcttatgagaatttcctacgctgtcttgtcatttttaatcag
gaggtgatttctcgtgcagagttggtccagcttgtgtttcctttcctgggaaagtttcct
gagctctttgtgtggtttaagaatttcctgggttataaggagtcttcccacattgaggca
tttccaaaggagagagctacagaaggtattgcaatggaaattgattatgcttcttgtaaa
cgacttggttcaagttatcgtgccctgcctaaaagcttccagcaacccaagtgtaccggc
agaactcctctttgcaaagaagtattaaatgatacatgggtgtctttcccctcctggtct
gaagactccacctttgtcagctcaaagaaaacacaatacgaagaacacatctataggtgt
gaagatgaaaggtttgagcttgatgttgtcttggaaacaaacctagcaacgatccgtgtc
ctagaaactgttcagaagaagctgtcacgaatgtcagcagatgaccaagctaaattccgt
ttggataacaccctcggaggcacttcagaagtgattcaccgtaaggctattcagaggata
tatgcagacaaggctgcagacattcttgatggactgaaaaagaaccctggtgtagctgtt
cctatagtgctaaaaaggttaaaagcaaaagaggaagaatggcgagaagcacaaagaggt
ttcaataaaatttggagagagcaaaatgagaagtactacttgaagtcccttgatcatcag
ggaatcaacttcaaacagaatgacaccaaaaccctgcgctccaaaagtttgctcaatgag
atagagagcatatatgatgagcgacaagaacaggcatctgaagaccatgcacatgtacca
tccggctctcacttaacctttgtttatgaggacaagcagatcatggaggatgcagcctcc
ctcattatccatcatgtcaagcggcaggctgggatacagaaggaagataagtacaaaatc
aaacaaataatttatcatttcatcccagaccttttgttcgctcagcgagttgagctgtca
gatgtagaagatgagaaagaagatgaagaagatgaagagatggacattgacgagagtacg
ggggcaaccaaaaagcacaatggcatcgctggtagcccacccaagccaaaattaatgttc
aacaatactggagcacaaaaattgcgtggcatggacgatgtgtacaacctattctttgtg
aacaataactggtacatcttcatcaggcttcaccagatcctttgctctcgactcttgaag
atctacaaccaagcagagaagcagattgaggaagaatgcagagaaagggaccgtgaaatg
ttgacaggaaagcgagacaaaaatgacagtcctgccattcagcttcgactaaaggaacca
atggatattgatgtggaagactattacccagctttccttgatatggtacggaatcttcta
gatggcaacatggattcctcccagtatgaggacacccttcgggaaatgtttactattcat
gcgttcattgcttttacaatggacaaactcatccagagtatagtcaggcagctgcagcat
attgtgagtgacgaaatctgtatacaggtgactgacctatatctaatggagagtggtaac
tgtgccactggggggcccttggcaaccacttcctcccgaactgctatagaaagcaattac
cagcgcaaggctgaacagctcatgtcagatgagaactgtttcaagcttactttcatacac
agccgagatcaagtgtctttgaccattgacctgctagacactgaagaggaaaactcagat
gatcctgtggaagcagagcgctggtcagactttttggatcgttatatgaattcagattct
acctctcctgaactacgggaacatctagcacagaaacctgtgttcctgccaaggaatcta
cgtcgaattcgcaagtgccaacggggtcgggagcaacaagaaaaagaagggaaggaatgc
agcaataagaaatctatagagaatgctgagaattatgataaagcacagtgcaattttaaa
ctcaattcatacaagatggtgtatgtcttcaaatcagaagactacatgtacagaaggact
gcactgcttagagctcgtcagtctcatgagcgagtcagcacacggctacatcagcggttt
caagcctgggtggataaatggagcaaggagcacgtgactcgtgaaatggctgccgaaacc
agcaagtggttaatgggcgagggattggaaggcatggtgccttgcacaaccacctgtgaa
aaagaaacactgcacttcatgaaaatcaacaaatacagggtgaaatacagtgcattattc
aaggggccgtga
DBGET
integrated database retrieval system
