Hemitrygon akajei (red stingray): 140714376
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Entry
140714376 CDS
T11019
Symbol
cdhr1a
Name
(RefSeq) cadherin-related family member 1a isoform X1
KO
K16501
cadherin-related family member 1
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
haka04515
]
140714376 (cdhr1a)
Cell adhesion molecules [BR:
haka04515
]
Cadherins
Cadherin related
140714376 (cdhr1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Cadherin_2
Insulin_TMD
DUF2627
Motif
Other DBs
NCBI-GeneID:
140714376
NCBI-ProteinID:
XP_072881689
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Position
21:62047961..62106041
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AA seq
869 aa
AA seq
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MKHAEIYYNCIFFTVTCISLVQSDYAPYFYGNAPNSTNGNMAMLSIPEDTPIGSHLYTLN
GTDMEGNAVTYGMTFDPGSKNYFAVDPKTGSVTLVEELDREKEDEIEALISISDGVNEVV
EKVRILITDANDESPEFMKIPYIVNVPENTPPGASIFKVYAVDRDNGSGGSVTYFLQNMR
RSKFSIDRYSGILRIKPSASLDFEKSRAHFVTVIAKDGGGIHKGKHQIGSSTATVTINVV
DVQDTPPVFAGVPYYGYVYEDTEPGSEIFSVVAYDGDHGNPNPIHYSIAHGDDGSFEINS
TNGVITLLKTTEQLQKDVYKLLIQASEVDPDVDTPVFMTAMVTIQVVDLNNHRPTFYGEH
GPQSQFEITMQEHPPAGEILRGLKITVNDSDQGANAQFSLTLVGDGGVFRVIPQTILSEA
QVTIIVENSTAIDYEIFQMFTFELLAVESDTPEQLNSTATIIIHIVDTNDNTPKFTSEFY
VARIPENSPGGSPVICVSAHDPDSEMWGEVKYSIHGAGADLFLIHPSTGVIYTQPWAVLD
AEERSKYNFPIKAEDVEGKHSLAEVFVMVLDVNDHYPEFNENILDKVMIIGSPVKVEAKD
EDAEEPNNVVDYSIMQADPANVFDIGQATGEIVLKSYIRSLEVIHNITKNKDCQWSLIVQ
AKDRGSPSFSTTAVVRIDITEETSGKGHLADFLMQSKDNPMKALGAIAGIVCFFVVLTVI
ISTVMFWRNKKSNRVGPVRRIIKRRPGWKLQTRRSRWFQGKRSRKKRANLTTCASNQHLQ
NTSTNNNRPALPLALPSAPLLPPPPTTHSARLNKPKWDLPTVSGSISHKTNYNPQQSNNN
TMNINGALVSELKQRLERKMKEDASKLYL
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatgcggagatttactacaattgcattttcttcactgtgacgtgcatctctctg
gttcaatcagattatgctccctatttctatggcaatgcaccaaacagcaccaatgggaac
atggcaatgttgagcattcctgaagacacgccgatagggtcccacctatacactttaaat
ggcacagatatggagggaaatgctgttacatatggcatgacatttgatccaggatcaaaa
aactattttgcagtggatccaaaaactggaagtgtcacattggtggaagagctggacaga
gagaaggaagatgaaattgaggccctgatcagtatttctgatggtgtgaatgaagttgtg
gaaaaggttcgaatacttataacagacgctaacgacgagagcccagagttcatgaagata
ccttatattgttaatgtccctgagaacacgccgccaggtgccagtatcttcaaagtatat
gcagtggacagagacaatggatctgggggcagtgtcacctactttctgcagaacatgcgc
agaagcaaattctccattgaccgatacagcgggattctccggattaagccaagcgcatct
ttagattttgagaagtctcgggctcactttgtcactgttatcgcaaaggatggtggaggg
atacacaaaggaaagcatcagatcggctcatcaactgccactgtaacaattaatgttgtg
gatgttcaggacactcctcctgtgtttgctggtgttccctattatggatacgtgtatgaa
gacacagaacccggttcagaaatatttagtgtggtggcttacgatggagaccatggaaac
ccaaatccaatccattactcaattgcacatggagatgatggttcctttgaaataaatagt
acaaatggggtcattacacttctgaaaactacagaacaacttcagaaggatgtttacaag
ttattaattcaggcctcagaagttgacccagatgttgatacaccggtgtttatgacagcc
atggtgacaatccaagtggtcgatctcaacaatcatcggcccaccttctatggtgaacat
ggaccccagtcacaatttgagatcacgatgcaggaacatccacctgcgggagagatactg
cgtggtctgaaaatcacagtgaatgattctgatcagggggcaaatgcacaatttagcctc
acgttggttggcgatgggggagtattccgagttattccacagaccatcctcagtgaagcc
caggtcaccataatagtggagaactcaactgccattgactacgagatattccaaatgttc
acttttgagctccttgctgttgaatctgatactccagaacaacttaattcaacagccacc
atcatcattcatatagttgatacaaatgacaatactcccaagttcacttcggaattctat
gtcgctcggattccagaaaactcacctggaggctctcctgttatctgtgtatcagcacat
gaccctgactcagaaatgtggggagaagtcaagtactcgatacatggagcaggagcagac
ctattcctgattcacccaagcacgggagttatctacactcagccctgggcagtactggat
gctgaagaacgatcgaagtacaacttccccatcaaagcagaggacgtggaagggaaacac
agcttggcggaggtctttgtgatggttctcgacgtaaacgaccactatccagaatttaat
gagaacattttggacaaggttatgattattggatcacctgtaaaagttgaggccaaagat
gaggatgcggaggaaccaaataatgttgtagattactcgataatgcaagctgacccggcc
aacgttttcgacatcggtcaggccacgggagagatagtgttgaagtcctacatcagatct
ctggaggtcattcacaacatcaccaaaaacaaggactgccagtggtccttgattgtgcaa
gctaaagacagaggctctccctccttcagcacaacagcggttgtaagaattgatattaca
gaggagacttctggcaaggggcatttggcagactttttaatgcaatctaaagataatcct
atgaaagccctaggagcaatagctggaattgtttgcttttttgtggttctgactgtcata
atttccacggtcatgttttggcggaacaagaagtccaacagagtgggtcccgtgagacgc
atcataaagcgacggccaggctggaaactgcagacccgcagatcaaggtggttccagggt
aagaggtcaaggaaaaaaagggctaatttaacgacttgtgcatccaaccagcacttgcaa
aacacgagtacgaacaataaccgcccggcacttccactggctttgccaagtgcacccttg
cttccccctccaccgactactcactcagccagactcaataaacccaaatgggacctacca
actgtctcaggatccatcagtcacaaaacaaactacaaccctcagcaatcaaataacaac
accatgaacatcaatggagccctggtgtcagagcttaaacagcgcctggagagaaaaatg
aaagaagatgcttctaagctgtacttgtaa
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