Hemitrygon akajei (red stingray): 140715116
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Entry
140715116 CDS
T11019
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04110
Cell cycle
haka04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
140715116 (smc3)
04114 Oocyte meiosis
140715116 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
haka03036
]
140715116 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
haka00535
]
140715116 (smc3)
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
140715116 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
140715116 (smc3)
Proteoglycans [BR:
haka00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
140715116 (smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
140715116
NCBI-ProteinID:
XP_072882954
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All DBs
Position
23:complement(2533028..2655350)
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AA seq
1210 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESINLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQEARDKMEDIERVARELRAKISSMKEEKEQLTHERQEQIK
QRTKLELRAKDLQDEMAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFSAVKEKEEN
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELRSLDQAINDKKRQIAAITKDL
EDTEANKEKNLEQYSKLDQDLAEMKSRVEELDKKYYEVKNRKDELQSERNYLWREENAEQ
QALAAKREELEKKQQLLRGATGKAILNGIDSINKVLEHFGRKGINTHIINGYHGIVMNNF
ECDPAFYTCVEVTAGNRLFYHIVESDEVSTKILMEFNKQNFPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYIQRFDKAYKHVFGKTLICRSMEVSTQLARAFNMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDARKAEEELTELEAKLNENLRRNIEKINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQDNRQLLNERIKLEGIMTRLETYLSENLRKRL
DQVEQELNDLRETEGNTALTATTTELETINKRVRDTTARAEELEALIDKTEAETKDRLKS
MDRWKSMEKDHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNQELKKYSHVNKKALDQFVNFSEQKEKLMKRQEELDRGHKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFTKLVPGGKASLVMKKGDAEGSQSQDEGEGSASQSSV
PSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQ
ALDAQHRKAVSDMISELSSHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVITAEQAK
DFVEDDTTHG
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgtacattaaacaggtaattatccagggttttcgcagctacagggatcaaacaattgtt
gatccctttagctccaagcacaacgttatagttggtcgaaatggatctggaaaaagtaac
ttcttctatgctattcagtttgtacttagtgatgagttcagccaccttcgtccagagcag
aggcttgctctgctgcatgaaggaactggacctcgtgttatttctgcatttgttgaaata
atatttgacaattcggacaacaggttacctattgacaaagaggaggtttctcttcgtcgt
gtcattggagcaaagaaggatcagtactttctggacaagaaaatggtgacgaaaaacgat
gtgatgaatcttctggagagtgctgggttttccagaagcaatccttactatattgtcaaa
caaggaaagattaatcaaatggcaacagcaccagactctcaacgactgaaacttttgagg
gaagttgctggtacaagagtatatgatgaacgtaaagaggagagcatcaatcttatgaaa
gaaactgagggtaaaagagaaaagattaatgaattgttgaagtacatcgaggagcgtctg
catacactagaagatgaaaaggaggagttggcacaatatcaaaaatgggataagatgaga
agagcactggaatatactatttacaatcaggaactgaatgagactcgtgccaaacttgat
gagctttctgcaaaacgagagaccagtggtgagaagtcaaggcagctgcgtgatgcacag
caagaagctagagataaaatggaggatattgagagggtggcacgtgaactgagagcaaag
atttcatcaatgaaggaagagaaagagcaactaactcacgaacgacaggaacagattaaa
cagaggactaagctcgagctgagggcaaaggatttgcaggatgaaatggctgggaacagc
gagcaaaggaagcgtcttttgaaggaaaggcaaaaattgctagaaaaaattgaagagaag
caaaaagagcttgcagaaacagaaccaaaattcagtgctgttaaagaaaaagaagaaaat
ggtatagcaaggttggcacaagctacccaggaaagaacagacttgtatgccaaacagggt
cgaggaagtcagtttacatcaaaagaggaaagagataaatggatcaagaaagagctgagg
tcacttgatcaagctatcaatgataaaaaacgacaaattgctgcaattaccaaagaccta
gaggatacagaagccaataaagagaaaaatttagaacagtacagtaaacttgatcaagat
ctggctgaaatgaaatcgcgagtggaggagctcgacaagaagtactacgaagtaaaaaac
agaaaggatgagctacaaagtgagaggaactacctatggcgggaagaaaatgctgaacag
caagcattggcagcaaaacgagaagagttggaaaagaaacagcagctacttcgaggtgca
acaggaaaagcaattttgaatggaattgatagcataaacaaagtattagaacactttggt
cgtaaaggcatcaacacacacatcattaacggctatcatgggattgtaatgaataatttt
gaatgtgatccagctttttatacctgtgtggaagttactgcaggaaaccgtttgttttat
cacattgtggagtctgatgaagttagtacaaagattttgatggaatttaataaacaaaat
ttccctggtgaagttacttttcttcccttaaacaagctggatgttcgagatacagcgtat
cctgaaacaaatgatgcgatcccaatgatcagtaaattgaggtacattcaaagatttgat
aaagcatacaaacacgtatttggtaaaacgttaatatgtcgcagtatggaagtttccact
cagttggccagagcattcaacatggattgcattactctggaaggggaccaggttagtcac
cgtggtgctcttactggtggttattacgatacccgaaaatcaaggctggaacttcaaaag
gatgcacggaaagcagaggaggaattaactgaactggaagcaaaactgaatgaaaatctc
cgtaggaatattgaaaagattaataatgagatcgatcagttgatgaatcaaatgcagcag
attgaaacacaacagagaaagtttaaggcatcacgagacagcattctttcagagatgaag
atgttgaaagagaagaggcaacaatctgaaaaaacattcatgcctaagcaacgaagtttg
cagagtctagaagcaagtttacatgctatggaatcgacgcgagagtccttgaaagctgaa
cttggcacagatctgctttcacagcttagcctggaagaccaaaagcgagttgatgcactc
aatgatgaaatccgacagctccaacaggataatcggcaattattaaatgaacggattaag
ttagaaggtataatgaccagattagagacgtatctcagtgaaaatttgaggaagcgcttg
gaccaggttgagcaggagttaaatgacctgcgagaaactgagggcaacactgctctaaca
gccacaactactgaactggagaccattaacaagcgtgtgagggacaccactgcaagggca
gaagaactggaagctttgatagacaaaacagaagctgaaaccaaggatcgtcttaaaagc
atggaccgctggaagagcatggagaaagatcacatggatgctattaaccatgacaccaag
gagctggagaagatgacaaaccggcagggcatgttgcttaagaaaaaagaagaatgcatg
aagaaaatcagagaattgggctcattgccacaggaagcttttgaaaagtatcaaacattg
agtctcaagcagctattccggaaattggaacagtgtaatcaggagctgaagaagtacagt
catgtcaacaaaaaggccttggaccaatttgtgaatttctcggaacagaaggagaaactc
atgaagcgacaagaagagcttgaccgtggccacaagtccattatggagcttatgaatgta
cttgagttgagaaaatatgaagccatacagcttactttcaagcaggtatccaagaatttc
agtgaggtgtttacaaagttggtcccaggtggtaaagcatccttggttatgaagaaaggt
gatgcagaaggaagccagtcacaggatgagggtgaaggcagtgcatcgcagagcagcgtg
ccatctgttgatcaattcacaggagttggaattagggtgtcatttacgggaaaacaagga
gaaatgcgagaaatgcagcagctttctgggggtcagaaatcattagtagcacttgcttta
atctttgccattcagaaatgtgacccagcacctttttacctctttgatgaaattgaccag
gccctggatgctcaacacagaaaagctgtttcagatatgatatccgagctttcttcacat
gcccagttcattacaactacattcaggccggaattgcttgaatctgcagacaagttctat
ggagtgaaattcaggaataaggtcagtcatattgatgtgatcacagctgaacaagctaaa
gattttgtggaagacgataccacgcatggataa
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