Hemitrygon akajei (red stingray): 140715179
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Entry
140715179 CDS
T11019
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
haka03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
140715179 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
140715179 (exosc1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
140715179
NCBI-ProteinID:
XP_072883100
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All DBs
Position
23:14665175..14693647
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AA seq
200 aa
AA seq
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MLREAAMAPVKLCIPGERLCSIEDSTPGEGTYSRHGYIFASLAGYVMKKNDNGMVPIISV
VRDSEPQLLPEVGVVVTCKVTSINPRFAKVHILYVRSTPLKGAFKGTIRREDIRATEKDK
IEVYKCFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCP
KSHGKEFRKVARVQPEFLHT
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcgaagctgcgatggcgccggtgaagctttgtatcccaggagagagactgtgc
agtatagaggacagcacacctggggaaggcacgtattccagacacggatacatttttgcg
tctttagcaggatatgtgatgaagaaaaatgataatggaatggtgcccattatatcagtg
gttcgggactcagagccccagctcctaccagaagttggtgttgttgtaacgtgtaaggta
accagtattaacccacgatttgctaaagttcacattttatatgtacgatctactccgttg
aaaggggcttttaaaggaaccatcaggcgagaagacatacgagcaacagaaaaggacaag
atcgaggtctacaaatgtttcaggcctggcgatatcgttttagcaaaagtgatctcccta
ggtgacgctcaatccaactacctgctgacgacagcagaaaatgagctcggagtggtcgtc
gcacacagtgaagcaggtgcacagatggtccccatcagctggtgtgagatgcagtgcccc
aaatcacacgggaaagagttccgtaaagtggctcgagtgcagccagaattcctgcacacc
tga
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