Hemitrygon akajei (red stingray): 140715387
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Entry
140715387 CDS
T11019
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haka03021
]
140715387 (btaf1)
Transcription machinery [BR:
haka03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
140715387 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
Vac14_Fab1_bd
TOR1L1_N
TPR_Trm732_C
HEAT_2
HEAT_EZ
UTP20
ARM_ECM29
Arm
Motif
Other DBs
NCBI-GeneID:
140715387
NCBI-ProteinID:
XP_072883594
LinkDB
All DBs
Position
23:complement(40336764..40413690)
Genome browser
AA seq
1864 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELHNLLSRVLTYLRSPNWDTRI
AAGQAVEAIVKNVNEWNPTPKLKQEPVSEIPTDETSLDRLSFDRFDISRLLKHGASLLGS
AGAEFEIQHEKTGDIDHKERIAHQRKLLQKKLGLDMGAALGMNTEELFNDEDLIYNPSPT
PTVLKQPVGRTSGCLSSRNHALVQAADLIEAEFQPGMSSRQKNKAKRMAKLFAKQRSRDT
TEGNANNEKCNDNVDVEPEEKRRKLANVVIEQAATESKVLIDNVLDNSSSFDESNEWPLE
SFCEELCNDLFNPSWEVRHGAGTGLREILKAHGKSGGKIGDSTLEEIEQQHQEWLEDLAI
RLLCVFALDRFGDFVSDEVVAPVRETCAQTLGVVLKYMNERGVHGTVVVLLKLLAQEQWE
VRHGGLLGIKYALAIRQDLIDTLLPKVLPTIIDGLQDLDDDVRAVAAAALVPVVENLVQL
QASEVPFIVNTLWDALLDLDDLTASTNSIMTLLASLLTYRQIQQYSIQQSLTVLVPRVWP
FLRHTISSVRKAALETLFTLLSTQDQSCVMWLTPILQDMLRHIYQSCILESNQEILELIQ
KVWLELLNKAPLQYVVAAACPWMGAWLCLMMQPSHLPIDSNMLLEVKAKSKEKYCTKHRQ
GQAPAKEVKQEYVAGLDTINEDQATRDYVVTRTRLKAARLLGALCCSMCEPSVNSINQEV
KPAESLAQLLLFHLNSKSALQRIAVALVISEWANLKKDCVVVSNAVQPRLMAILSEHLYY
DEIAIPFTRMQNECKQLIASLVEANCDVSSSVNNSVFTIDQASELITTTFNEVTSSHHLK
PSVIQQLDGKRQQVQMTVAETNQEWQTLHLRVHIFSACAVINLQQLPEKLNPIIKPLMEG
VKKEENILVQNYAASCIAKLLQQCTARCPCPNPKIVKNLCNSVCVDCTVTPSATSPVPTS
NSVDNTKGPNSEKDGMHHAVNKTKGIITLYRHQQAAFALTSRRGPTPKALKGSSADIPQG
SVGISLNEHDETQKSNLIQRRGAEYALTTIGKHFGAEMATTLPYLWDSMVGLLKTHVDVH
NFNGNVVLEKGDIAAQELVNSLQVLEITAAAMGSDIHAQLLQHLPHLCTCLRHPYTAVRH
MAARCVGVMSKIATMETMSIFLEKVLPWLGAIDDNTKQEGAIEALACIMEQLDVDIIPYI
VLLVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSEELINQKARERHFL
EQLLDGTKLENYKIPVSIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICI
LAGDHYLRAQEYTKTQAEDNSPLPSLVVCPPTLTGHWIDEVGKFCSKEILYPLHYTGPPT
ERARLQHLVKNHNLVVASYDVVRNDIDFFKNIKWNYCILDEGHIIKNGKTKLSKAVKQLT
ASYRLILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSKEQEA
GVLAMEALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCNLSTLQIQLYEDFAKSRAKCDV
EDTISSSTVAEENEKPKLKATGHVFQALQYLRKLCNHPALVLTSQHPEFQHIKEQLAAQN
SSLHDIQHAPKLSALKQLLLDCGLGNSAASENGTESVVAQHRVLIFCQLKSMLDIVEHDL
LKPQMPSITYLRLDGSVPAGQRHSIVARFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFV
EHDWNPMRDLQAMDRAHRIGQKRVVNIYRLITRGTLEEKIMGLQKFKMSIANTIISQENA
SLQSMGTDQLLDLFTLDKDGQENKGSGSTEKSSVKAILENLGELWDQQQYDTEYNLDNFM
HSLK
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttcgaggcttgatcgtctctttattttacttgatactggcactacaccagta
actagaaaagcagcagctcaacaattgggtgaagttgttaaactccatcctcatgaactg
cataacctgttatccagagttttaacatatttacgcagtcctaattgggacactcgcatt
gcagctggccaagcagtagaagctattgtgaagaatgtaaatgaatggaaccctactcca
aagctaaaacaagagccagtttcagaaattccaacagatgaaacgtctttggatcgtttg
agttttgatagatttgacatatcacgacttttgaaacatggagcatccctgcttggctct
gctggcgcagaatttgaaatccaacatgaaaaaacaggagatattgatcataaagaaaga
atagctcaccagagaaagttgttgcaaaagaaattgggccttgacatgggagcagctcta
ggaatgaacactgaagagctgtttaatgatgaagatctcatttataatccctctccaact
ccaacagtactgaagcagcctgtaggtagaacctcaggttgtttgagctcaaggaatcat
gcacttgttcaggctgctgatctaatagaagctgaatttcaacccggaatgagcagtagg
cagaaaaataaagcaaagaggatggctaagctgtttgctaagcaacgatccagagatacc
acagaaggaaatgcaaacaatgaaaaatgcaatgataatgttgacgtggagccagaagaa
aaacgtagaaaacttgcaaatgttgttattgaacaagcagcaactgaatctaaagtgttg
attgacaatgttcttgacaattcttcctcatttgatgagtcaaatgaatggccgttagaa
agcttttgtgaagaactttgcaacgatcttttcaacccttcatgggaggttcgtcatggt
gcaggaactgggctgagagagattttgaaggcacatgggaaaagtggaggtaaaattgga
gacagcactttagaagagattgaacagcagcaccaggaatggcttgaggacttggctatc
cgtcttctttgtgtgtttgccctggatagatttggagattttgtatctgatgaagttgtg
gcacctgttcgggaaacctgtgctcaaacacttggagttgtgttgaagtacatgaatgag
aggggtgtgcatggaacagtggttgtcttattaaaattgttggcacaagaacagtgggaa
gtcagacacggtggacttctgggaatcaagtatgctttggcaatccggcaagacttgatt
gatacattgctgccaaaagtacttcccactataattgatggcctgcaggacctggatgat
gatgttcgtgctgtagcagcagctgcacttgtaccagttgtggaaaatcttgtacaactc
caggcatctgaggtgccatttattgtcaatactttatgggatgctcttctagacttggat
gatcttacagcttctactaatagcattatgactctacttgcttcactattgacatatcgt
caaattcaacagtatagtatccagcaatcactcacagttttggtgcctcgtgtttggcca
tttttacgccatactatttcttctgttcggaaagcagctttggaaactttattcactctt
ctgtctacgcaagaccaatcctgtgtaatgtggttaacgccaattctacaggatatgttg
agacatatatatcaatcgtgtatcttggaaagtaatcaagaaattttggaacttattcag
aaggtgtggttggaattgttgaataaagcccctcttcaatatgtggttgctgctgcttgc
ccttggatgggagcttggttatgtttaatgatgcagccttctcatttgcctatcgattca
aatatgcttctagaggttaaagccaaatcaaaggaaaaatattgtactaagcaccgacaa
gggcaagctccagcaaaagaagtgaagcaagaatatgttgctggtttagacaccattaat
gaggatcaagctaccagagattatgtagtaacgcgaacacgcctaaaggcagccaggttg
ctaggagcactctgctgttccatgtgtgagccaagtgtcaattccatcaatcaagaagtg
aaacctgctgagtctcttgctcaacttttattgttccatttgaactccaagtctgcactg
cagagaattgctgttgcattagtcatttctgaatgggcaaacctcaaaaaggactgtgtg
gttgtatctaatgctgtacagccacgattgatggctatattgtctgaacatctttattac
gatgagatagctattccatttacgcgaatgcagaatgaatgtaagcaactgattgcatca
ttagttgaagccaactgtgatgtcagtagcagtgtgaacaacagtgtctttaccatagat
caagcaagtgaactgatcactacaacattcaatgaagtgacatcgtcccatcatttgaag
cccagtgttatccaacaattggatggcaagcgccagcaggtacagatgactgtggcagaa
acaaatcaagaatggcaaactcttcatctgagggttcatatattttctgcttgtgcagtt
attaacttgcagcaacttccagaaaaactgaatcctatcattaaaccattaatggaagga
gtgaaaaaggaggaaaatatacttgttcagaattatgcagcttcttgcattgctaaattg
ctccaacaatgtacagcaagatgtccttgtcccaatcccaaaattgtgaaaaacctttgc
aactctgtttgcgtggattgtacagtaactccttcagcaacctctccagtacccacatct
aacagtgtggataacactaaaggaccaaattctgaaaaagatggaatgcatcatgcagta
aataagaccaagggaatcatcacactctacaggcatcaacaagctgcttttgctctaact
agtagacgagggccaacgcccaaagctctcaaaggctcatctgcagacattcctcaaggg
agtgtggggattagtttgaatgaacatgatgagacccagaagtcaaacctaattcagaga
agaggagctgaatatgcacttaccacaattggaaagcactttggtgcagaaatggctaca
actctgccttatctctgggactctatggttggactcctaaaaactcatgtagatgttcat
aatttcaatggaaatgtggtacttgaaaagggagatattgctgcccaagaattagttaac
tcattacaggtgctggaaatcacagcagcagcaatgggctctgacatccatgcccagtta
ttgcaacatcttccacacctttgcacttgtttgcgacacccatacactgcagtgagacat
atggctgcgagatgtgtaggtgtaatgagcaaaatagctacaatggaaacaatgagcatt
ttcctggagaaagttcttccttggttaggagccattgatgataatacaaagcaagaggga
gcaattgaagctctagcttgtattatggagcaacttgatgtagatatcatcccatatatt
gtcctgttggtagtccctgtactgggcaggatgagtgaccaaacagatagtgtgcgattt
atggctacacagtgctttgcaacattgattagattaatgccactagaggctggtattcca
gatccaccaaatatgtcagaagaattgattaaccaaaaggccagagaacgccattttttg
gaacagttattagatgggacaaagttggaaaattacaaaattcctgtttctatcaaagca
gaactcaggaaatatcagcaggatggtgtaaactggttggcatttctgaacaaatataag
cttcatggaattttgtgtgacgatatgggtctgggaaagacgttgcaatcaatttgcatt
cttgcaggggatcattacctcagagcacaggagtatacaaaaactcaggcagaagataac
tcacctctaccatcattggtagtatgtcctccaaccctaacgggacattggatagatgaa
gtgggaaagttctgttctaaagaaatactatatccgttgcactatactggacctcccact
gagcgggcaaggttacagcaccttgtgaaaaatcacaaccttgttgtagcatcatatgat
gttgttcgaaatgacattgattttttcaaaaatattaagtggaactattgtattcttgat
gaagggcacatcatcaagaatggtaagacaaaactttcaaaggcagttaagcaactaact
gcaagctacagattaatactttctggaacaccaatacagaacaatgtcttggaactctgg
tcattgtttgacttcctgatgccaggatttttgggtactgagcggcaatttgcagctcgt
tatggaaagccaatattagctagcagagatgctaggagttcttcaaaggagcaggaggca
ggtgttcttgcaatggaagcattgcatcgacaagtacttcctttcctactacgcagaatg
aaggaagatgtccttcaagatcttccacctaagataatacaagattattactgtaatctc
agtactttacagatacaactgtatgaagattttgctaaatctcgtgctaagtgtgacgtt
gaagacactatatcatcaagtacagtcgcagaagaaaatgagaaacctaaactcaaagcc
actgggcatgtatttcaggcgttacaatatttgaggaaactttgcaatcatcctgcacta
gtactgacttcacagcatccagaattccagcatattaaggagcaacttgctgctcaaaat
tcatctctgcatgatatccagcatgctccaaagctctctgccttaaagcagctgcttctt
gactgtggacttggcaacagtgcagcctcagaaaatggcactgaatcagttgtagctcaa
cacagagttctcattttctgtcaactgaagagcatgttggacattgtggaacatgacttg
ctcaaacctcagatgccaagtatcacctatttaaggttagatggtagcgttcctgcaggc
caacgacattccattgtggcaaggtttaataatgacccctcaatagatgttttgctgtta
accacccatgtcggcggccttggtcttaatcttactggagcagatacagtggtgtttgtt
gaacacgactggaaccctatgcgagatttgcaagcaatggatcgagctcatcgtattgga
cagaaacgtgttgttaatatttaccgattaataacaagaggaacattagaggaaaaaatt
atgggattgcagaagtttaaaatgagcattgcaaataccattattagtcaagagaatgca
agtttgcagagcatgggaacagatcagcttctggatttattcactcttgataaggatggc
caagaaaataagggatctggttccacagagaagtcatctgtgaaggcaatcttggaaaac
cttggagaactttgggatcaacaacaatatgacacagaatataatttagataatttcatg
cattctctgaagtaa
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integrated database retrieval system
