Hemitrygon akajei (red stingray): 140715426
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Entry
140715426 CDS
T11019
Symbol
dhx32b
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haka03041
]
140715426 (dhx32b)
Enzymes [BR:
haka01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
140715426 (dhx32b)
Spliceosome [BR:
haka03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
140715426 (dhx32b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
140715426
NCBI-ProteinID:
XP_072883698
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All DBs
Position
23:50087079..50117279
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AA seq
753 aa
AA seq
DB search
MAALELCTAKQDSTRQSCPQEFGSDNGDEMLPCDMDLEMNPFDGLPYSSRYYKLLQERKK
LPVWEAKDVFMSSLIGNNFIILSGEACIGKSSQIPQWCAEYCFSSRYQHGVVVCTQTHKQ
TAVDLALRVADEMDVNIGHEVGYVIPYENCCMNETILRYSTDDMLLQEMMSNPLLEHYAV
IIVDETHRRTISTDVLLGLLKDLVRQRPELKVVIITFPHMSSKLHTYYGDGPLIQVETEE
PIGCPFEIVYSCMPQENYFFSALRLLFKIHSTMEKGDVAIFLSCKKEIDEAYKIIERETA
KQHLMLGELVPISLDPERTMSFDRPGDTLEQNGKRYKRKVILTTSVGKSLLYMENVKYVI
DVGMERRSVYNPRIRAESLVMRPISKIQAKMRTQIIDTTGLGKCFRLYSEEFLKKEMPDF
SPACVLESNLTRMVLFLKRMDIADMGQCDFIERPAPEALMQALEDLDYLAALDDDGNLSE
IGIIMSEFPLDPQMAKALVASCEYDCVHEMLTIAAMVTAPCCFSEPPPSLEEVAQSCRRK
FFHPEGDHFTLINVYTAFKQSKLISSAEYSEDEKWCHDNFLNCSALRIADAIRADLLDIM
QRIELPISEPAFGTHKNSLNVKRALMSGYFMQTARDVDGLGNYVMLTHKHVTQLHPFSSY
CSTRLKPEWVLFHEFTISENNCIRIISEVSPEMFVQLVPQYYFSNLPHSESKEILQEITD
HLKLSTDGEVHHVTTKENDKPQENSTEDRCTIQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctcgaactgtgcactgctaagcaggacagcaccaggcaaagctgcccgcag
gaatttggatccgacaatggggatgaaatgttaccctgtgacatggacctggagatgaac
ccctttgatgggctgccttattcatctcgatattacaaactcctgcaggaaaggaaaaag
ctaccggtgtgggaagctaaggacgtcttcatgtcgagtttgataggcaataactttatc
atcctatctggagaagcgtgcatcggcaaaagcagtcagattccgcagtggtgtgccgag
tattgtttttcctccaggtatcagcatggggttgttgtgtgcacacagacacacaagcag
acagctgttgaccttgctcttcgtgtggcagatgagatggatgtcaacatagggcacgaa
gtgggctacgtaatcccgtatgaaaactgctgcatgaatgaaactatcctgaggtatagc
acagatgatatgctcctgcaggagatgatgtcgaaccctcttctggaacactatgcagtt
atcattgtggatgaaacgcacagacgaaccatttccacagatgtgctgctgggtcttctg
aaagacctcgtgagacagagaccagaactaaaggttgttataataaccttccctcacatg
tccagtaagctgcacacctattatggtgacggccctctaatacaagtggagactgaggag
cccattggatgccctttcgaaattgtttacagctgcatgccacaagaaaactatttcttc
tcagcacttagactgttgtttaaaatacacagcacaatggagaagggtgatgttgctatt
tttctatcctgtaaaaaggaaattgatgaagcctacaagattattgaacgagaaactgct
aaacagcatctgatgctgggagaactagtgccgatttctcttgacccagagcggacaatg
tcttttgacagaccaggtgacacgttggagcagaatggcaaacgatacaaaaggaaagtg
atattgaccacaagtgtggggaagtctttactttacatggaaaacgtgaagtatgttatt
gatgtgggcatggagagaagaagtgtttacaatccaagaatcagagctgaatctttagtg
atgcgacccatcagcaaaattcaggcaaagatgcgtacacaaatcattgacactactgga
ctgggcaaatgtttccgcttatattctgaggagtttctaaagaaagagatgcctgacttc
tcaccagcttgtgtgctagaatcaaaccttactcgcatggttttattcctaaagagaatg
gatatagcagacatgggccaatgcgacttcattgagaggccagctcctgaagccttaatg
caggcattggaagaccttgattaccttgcagccctggatgatgatggaaatttgtcagaa
attggaatcatcatgtctgaatttccactagatccccaaatggccaaagctcttgttgca
tcctgtgaatatgactgtgtacatgaaatgttaacaatagctgccatggtgacagctcct
tgttgtttctcggaaccgcctcccagtttagaggaagttgcacagtcttgtcgaaggaaa
ttcttccatcctgagggtgatcactttacacttataaatgtttacaccgcatttaaacaa
agcaagctgatctcatcagctgaatactctgaagatgaaaaatggtgccatgacaatttt
ttaaattgctctgctctgaggatagcagatgccatccgggctgatctgctggacattatg
cagcgcattgaacttcccatttcagaaccagcttttggcacacataagaattcactgaat
gtgaaaagagctttaatgtctggctatttcatgcagactgctcgagatgttgatggatta
ggaaactacgtcatgctaacacacaaacatgtaacacagttgcaccccttttcaagctat
tgttctacaagattaaaaccagaatgggttttgttccatgaatttacaatatcggagaac
aactgcatcagaattatctcagaggtgtcacctgaaatgtttgtacagctagttcctcag
tactatttcagtaacctacctcacagtgagagtaaggaaattctgcaggaaattactgat
cacttaaaactgtcaacagatggagaagtacatcatgtaacaaccaaagagaatgataag
ccacaggaaaactcaactgaagacagatgcaccattcaataa
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