Hemitrygon akajei (red stingray): 140715497
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Entry
140715497 CDS
T11019
Symbol
trub1
Name
(RefSeq) pseudouridylate synthase TRUB1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haka03016
]
140715497 (trub1)
Enzymes [BR:
haka01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
140715497 (trub1)
Transfer RNA biogenesis [BR:
haka03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
140715497 (trub1)
Prokaryotic type
140715497 (trub1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
140715497
NCBI-ProteinID:
XP_072883932
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All DBs
Position
23:60442500..60491816
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AA seq
280 aa
AA seq
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MAGSAAQIGLVEKLQGLNGLFAIHKKKGPTSADVLNLLKSKLLEEAGIKQHPKKRKKQVL
KMGHGGTLDSAASGVLVVGIGKGTKMLSGMLSGSKKYTTVGEFGKATDTFDAIGMVTEEQ
SYDHITKDDLERTLKKFTGSIMQTPPLYSALKQNGQRLSCLVKKGEAVESKPARCVMVYD
LSVQDYSPPHFTLDIECGGGFYVRSLVNDLGKELSSCAFVKELIRTKQGPFTLDEHALQE
EKWTINEVVKAIENCTQLVTNEGGYKKLKSEISEQEKEID
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcggggagcgcagcgcagatcggactggtcgagaagctgcagggtctcaacggactc
tttgcaattcacaaaaagaaaggccctacttcagcagacgtgctgaatctcctgaagtct
aagcttttggaagaagctggcattaaacaacatccaaagaaaagaaagaaacaagttctg
aaaatgggtcatggaggaacccttgatagcgcagcatcaggagtacttgtggttggaatt
ggaaaagggaccaaaatgctcagtggaatgttgtcaggctctaagaaatacacaactgtt
ggagaatttggaaaggcaacagacacatttgatgccataggaatggtgacagaagaacaa
tcatatgatcacataacgaaagatgatctggaaaggactctgaagaaatttacaggaagc
attatgcagactccaccattatattctgctttgaaacagaatgggcaaaggctttcttgt
ttggtgaagaaaggagaagctgtagaatctaaacctgctagatgtgtaatggtgtatgat
ctttctgtacaggattacagtcctcctcactttactcttgatattgaatgtggaggtggc
ttttacgttcgtagtttggtgaatgaccttggcaaagagctttcttcctgtgcctttgtt
aaagagttgatcagaaccaaacagggaccttttacattggatgaacatgcacttcaagag
gagaagtggacaatcaatgaagtagtgaaagccattgagaactgcacacagttggtcaca
aatgaaggaggttacaagaaattaaagagtgaaatctctgaacaggaaaaagaaattgat
tga
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