Hemitrygon akajei (red stingray): 140715729
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Entry
140715729 CDS
T11019
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140715729 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haka03019
]
140715729 (dis3)
Messenger RNA biogenesis [BR:
haka03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
140715729 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
140715729
NCBI-ProteinID:
XP_072884204
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All DBs
Position
2:131863823..131909484
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AA seq
956 aa
AA seq
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MLKTKTFVKKTRSGGVLKIVREHYLRDDILCGWRLCEECEAQASASLSDEPCSSSELCPQ
PHFLLPDTNVVLHQIDILEDPAIQNVIILQTVLQEIRHRSAPVYKRIKDVINNPEKHFYT
FTNEHHKDTYIEQEQGEGANDRNDRAIRVAVKWYNGHFKKSQNSNVHVQVILITNDKKNK
ERAVEDGLVAFTCEEYIKSLAGNPELIDRLACISDNSKEIESGKLLFAEHLPLSKIQQGL
KSNSYLQGTFRANRDNYLEATVCVHGEEGKSKEIFIQGLKNLNRAIHEDVVAVELLPQEM
WIAPSAVVIQDEGQVEEDGEDQQEHLLKKVTTKNVSKPTGKVVGIIKRNWRPYCGMISKS
EIKESTRHLFTPADRRIPRIRIETRQAAALEKHRIIVVIDGWPRSSRYPNGHFVKTLGNA
GDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWGITEQDLKERKDLRHLHICSVDPPGC
TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESANRGTTVYLCEKRIDMVPEL
LSSNLCSLRSNVERFAFSCIWEMTHSAEILNTKFTKSVINSKASLTYAEAQMRIDDANMN
DEVTKGLRRLNKLAKILKKKRIDNGALTLSSPEVRFHMDSETHDPIDLQTKELKETNSMV
EEFMLQANISVAQKIYEEFPECALLRKHPAPPPSNYDILVKAANSKNLEVKTDSAKALAE
SLDKAEVPGSPYLNTLLRILTTRCMMQAVYFCSGMDTDFHHFGLASSIYTHFTSPIRRYS
DIIVHRLLAVAVKADSTYPDLMDKHKQQALCNNLNYRHKMAQYSQRASVAFHSQLFFKNK
GIIDEVGYILFVKKNAIVVLIPKFGLEGTVFFEEKGKQAPKMYYNEEIPSLTVEETSFKL
FDKVTVTIMVDASNIQHQKIRMSLVDPVIPGISVPRTISQQNTANDEPEVKKARQS
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaaccaaaaccttcgttaagaagacgcggtctgggggagtactgaagatcgtg
cgcgagcattacctgcgcgatgatatcttgtgcggctggcggctgtgcgaggagtgcgag
gcccaggcctcggcctccctcagcgacgagccctgcagcagtagcgagttgtgcccgcag
ccccatttcctacttcccgacaccaacgtggtgcttcatcagattgatatccttgaagat
cctgcaatccagaatgtgataatcttgcagactgtgttgcaagagatcagacatcgaagt
gctccagtgtacaaaagaattaaggatgtgattaacaaccctgaaaaacatttttatact
tttacaaatgaacatcacaaagatacctacatagaacaagaacaaggtgaaggcgcaaat
gacagaaatgatcgagcaatacgagtagcagtgaagtggtataatgggcattttaaaaag
tcacagaacagcaatgtgcatgtacaggtcatcttgataacaaatgataaaaagaacaag
gagcgtgctgttgaagatggcttggttgcattcacttgtgaagaatatatcaaaagtttg
gctggaaatccagagctaattgataggctggcttgtatttctgataatagtaaagaaata
gagagtggtaagctgctttttgcagaacatttacctctgtccaaaatacaacaaggtttg
aagtctaattcttaccttcaagggacctttcgagccaacagagacaactacctggaagct
acagtctgtgtccatggtgaagaaggaaaaagcaaagagatttttattcaggggttgaag
aatcttaatcgtgctatccatgaagatgtagtagctgtagaattgttaccccaagagatg
tggattgcaccatcagcagttgtaattcaggatgaaggacaagttgaagaggatggagaa
gatcagcaagaacatcttctgaagaaagttacaactaagaatgtttcaaagccaacgggt
aaagttgttggaataattaaaaggaactggagaccatactgtggcatgatttcaaaatca
gaaattaaagagtcaacaagacatttgttcacaccggcagaccgcaggattcctaggatt
cgaatagaaacacgacaggctgctgcacttgagaagcacagaataattgttgtaattgat
ggttggccaagaagttctcgctatcccaatggccactttgtcaaaactctaggaaatgct
ggtgataaagaaacagaaactgaagttcttctcttggagcatgatgtcccacatcagcct
ttctcacaggctgttcttagctttctgcctaagatgccttggggaatcacagaacaggac
ctgaaagagcggaaagacctaaggcatctccatatctgcagtgtggatcctcctggatgt
acagatatcgatgatgctctgcattgtagagaattggagaatggaaatctggaggttggc
gtacacattgcagatgtaagccacttcattcgcccaggaaatgcactggatcaagagtca
gcaaatcggggaacgacagtttacctttgcgagaagaggattgacatggttccagaactg
ctcagctcaaatctttgctctttaagatccaacgtggagaggtttgcattttcttgtatt
tgggaaatgacacacagtgctgaaatcctaaatactaagtttacaaaaagtgttattaat
tctaaggcatcacttacatatgcagaagcgcagatgagaattgatgatgcaaacatgaat
gatgaggtcacgaaaggacttcgccgcttaaataaactggcaaagattctgaaaaagaag
aggattgacaatggtgctctcacattatcttctccagaagtccgatttcacatggacagt
gagactcatgatcctatcgacctgcaaaccaaagaattaaaagaaaccaattcaatggta
gaggagttcatgctgcaggccaacatctcagttgcacagaaaatttatgaagaattccca
gaatgtgcactcctcagaaagcatccagcaccacctccatccaattatgacatccttgtt
aaagcagcaaattctaaaaatttagaggtaaagactgattcagcaaaggccttggcagag
tctttagataaagcagaggttcctggatccccatatttgaacacactcctgcgaattctg
accacacgttgcatgatgcaggctgtctacttctgttcaggaatggatactgactttcac
cattttggtctggcttcatctatctatactcacttcacgtcacctatcagaagatactct
gatataatagtacatcgtctcttagctgtggctgttaaagctgactccacctacccagat
ctcatggataagcacaaacagcaagctttatgtaataatcttaattatcgtcacaaaatg
gcacaatattcccagcgggcttctgtggcattccatagtcagttattctttaaaaacaaa
ggaatcattgatgaagttggctacattctgtttgtgaagaagaatgccattgtggtgcta
attccaaagtttggattggagggtacagttttctttgaagaaaaaggcaagcaagcccca
aagatgtactacaatgaagagatcccatctttaacagtagaagagacatcatttaaactg
tttgacaaggtaactgtgacaatcatggtggatgcatcaaacatacagcaccagaagatt
agaatgagtctggttgatccagtgattcctggaatcagtgttccaagaactatttcacag
caaaacactgctaacgatgaacctgaagtgaagaaagccaggcaaagttaa
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