Hemitrygon akajei (red stingray): 140715781
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Entry
140715781 CDS
T11019
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03082
ATP-dependent chromatin remodeling
haka03083
Polycomb repressive complex
haka04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140715781
03083 Polycomb repressive complex
140715781
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
140715781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
haka03036
]
140715781
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
140715781
Histone modification proteins
HAT complexes
HATB complex
140715781
HDAC complexes
Sin3A-HDAC complex
140715781
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
140715781
PRC2.2
140715781
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
140715781
Heterochromatin formation proteins
Other heterochromatin formation proteins
140715781
Chromatin remodeling factors
NuRD complex
140715781
NuRF complex
140715781
NuRF complex (fruit fly)
140715781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
eIF2A
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
140715781
NCBI-ProteinID:
XP_072884263
LinkDB
All DBs
Position
24:550570..607909
Genome browser
AA seq
472 aa
AA seq
DB search
MADKEASDAHYDVTPVTSHTHCSSLLTAASPVQSTHLDTTPAICHEWKRGKKTAFDDAVE
ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGKDYSVHRLVLGTHTS
DEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM
PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL
LSASDDHTICLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM
IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF
ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH
TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAPDPEGQGS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagaagcatcagatgcccattatgatgttacacctgtgacgtcacacacc
cactgttcttcattactgacggccgcctcaccagtgcagtccactcatctcgacacgacg
ccagccatttgtcatgaatggaaacgaggaaaaaaaacagcctttgatgatgctgtggaa
gaacgtgttattaatgaagaatacaagatctggaagaaaaatactcccttcttgtatgac
ctggttatgactcatgctctggaatggccaagtctgactgcccaatggctacctgatgtt
tccaggcctgaagggaaggattacagtgttcacaggttggtccttggaacccatacgtct
gatgagcaaaaccatttagtcattgccagtgttcagcttccaaatgatgatgcacagttt
gatgcttctcattatgatagtgagaagggagaatttggtggatttggttctgttagtgga
aaaatagaaattgaaattaaaatcaaccatgaaggggaagtgaatcgtgcacgctacatg
cctcagaatccttgtattatcgctacaaagactccctccagtgatgtgctggtctttgat
tatacgaaacatccttccaaaccagatccttctggtgaatgcaatccagatcttcggttg
cgaggacatcagaaggaaggttatgggctttcttggaatccaaatcttagtggccattta
cttagtgcttcagatgatcataccatctgtttatgggacatcagtgctgtgcctaaagaa
ggaaaaatagttgatgcgaaaaccatcttcacgggtcatacggcagtagtggaagatgta
tcatggcatttgctacatgaatctctgtttggttctgtggcagatgatcagaaactcatg
atctgggacaccagatctaacaacacatccaagccgagtcattcagttgatgcacacact
gccgaagtgaactgtctctccttcaacccttacagtgaattcatcctggcaactggttct
gctgataagacagttgcactatgggatttaagaaatctgaaattgaaactgcattccttt
gaatcacacaaggacgagattttccaggttcaatggtctccacacaatgaaacgattctg
gcatcaagtgggacagatcgtaggctgaatgtatgggatctgagtaaaattggagaggaa
caatccccagaagatgctgaagatggtcctccagagttgctgtttattcatggcggacac
acagctaaaatttcagacttctcttggaatccaaatgaaccttgggtaatttgttctgta
tctgaagacaacatcatgcaggtgtggcaaatggctgaaaatatttacaatgatgaagat
ccggaaggagcccctgatcctgaaggccaaggctcgtag
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integrated database retrieval system
