Hemitrygon akajei (red stingray): 140715800
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Entry
140715800 CDS
T11019
Symbol
taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140715800 (taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
haka01002
]
140715800 (taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haka03021
]
140715800 (taf2)
03036 Chromosome and associated proteins [BR:
haka03036
]
140715800 (taf2)
Peptidases and inhibitors [BR:
haka01002
]
Metallo peptidases
Family M1
140715800 (taf2)
Transcription machinery [BR:
haka03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140715800 (taf2)
Coactivators
SAGA/TFTC/STAGA complex
140715800 (taf2)
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
140715800 (taf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
Peptidase_M1_N
Peptidase_M1
SR-25
Motif
Other DBs
NCBI-GeneID:
140715800
NCBI-ProteinID:
XP_072884330
LinkDB
All DBs
Position
1:complement(6725544..6836365)
Genome browser
AA seq
1204 aa
AA seq
DB search
MRSVSHFYWWIDKFPAVDGDHLQVQVVCITNINFQRKSVIGYVELTIFPLLANLSRIKLN
SKQCRIYRVRINDLEAAFIYNDPTLEVCHHESKQRNLNYFSNAYAAAVSAVDPDTGNGEL
CIKVPSELWKHVDEMKVLKVYIEFSLDQPKGGLHFVVPNVEGSMAERGAHVFSFGYENCT
RFWFPCVDSFSELCTWKLEFTVDAAMVAVSNGDLVESVYTHDMRKKTFHYMLTIPTAAPN
ISLAVGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSFLHEIFEFYEEILTCRYPYAYYKT
VFVDEAYVEVASYASMSILSTNLLNSAMIIDQTPLTRRCLAQALAQQFFGCFISRMSWSD
EWVLKGISGYIYGLWMKKTFGVNEYRHWIKEELDKIVDYELKTGGVLLHPTFTGVKEKET
PAPHLHFSIRHPHTLSWNYYKMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQ
KFQSHMWSQMLLSTTGFLKSISNVSGKDIQPLIKQWVDQSGVVKFFGSFAFNRKRNILEL
ELKQDYTSLGTQKYVGPLKITVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPL
LNGEEVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVVAQEESI
LALEKFPTPASRLALTDILEHEQCFYKVRMHACFRLAKIANAMVNTWTGPPAMKSLFTRM
FCCKSCSNIVKTNNFMNFQSYFLQKTMPVAMALLRDIHNQCPKEVLAFILDLIKYNDNRK
NKFSDNYYRAELIGALSNSVTPAISINNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSY
RNTITVSCLKAIRVLQKNGHIPSDPSLFKSYAEYGHFVDVRIAALEAVVDYTQVDRSTDE
LQWLLDLVQNDAVPYIRHKVLSMLNKNPPFTKNTDSSLCSEALVDQLWKLMNSGTSHDWR
LRCDAVDMYYTLFGLSRPSCLPLPELGLVLNLKEKKTVLNPIIIPETGGSGQETLGSASM
HGLIPGFQINEEDHLAKDPASTIPGAQSVKRKAETPLGSPLEPGQVLEKDEDNSKVKLKI
KFSNSQEDEEIDMDSVHDSQAFIYHQLNILERPSTPGKETPAVETGMVSMPTTPVPSLGK
ESSSSRHGDHHHHHHHEHKKKKKKHKHKHKHKHKHDGKDKEKDLFTFSNSPASGRSLNSP
SISD
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgtttcacatttttattggtggattgacaaattccctgccgtggatggagat
cacttgcaagttcaggtggtctgcataaccaatataaactttcagaggaagtctgttata
gggtatgtggagttgaccattttcccattacttgcaaacctcagtagaattaaactgaat
agcaagcaatgtcggatttacagagtacgaataaatgacttggaagccgctttcatttac
aatgatcccaccctggaggtctgccaccatgaatcaaagcagcgaaatctcaattatttt
tccaatgcctatgcagcagcagtcagcgctgttgatcctgacactggaaatggagagcta
tgtatcaaggttccatctgaactgtggaaacatgttgatgagatgaaagttttgaaggta
tatatagaattttccttggaccagccaaaaggagggcttcattttgttgtgcccaacgtc
gaaggcagcatggctgagcgaggtgcacatgtcttttcctttgggtatgaaaactgtaca
aggttttggtttccttgtgtggattctttctccgaactatgcacatggaagttggagttc
acggttgatgcggccatggtagcagtttccaatggagatttagtggagtctgtttacacc
catgatatgaggaaaaaaacttttcattacatgttaaccatcccaacagcagccccaaac
atttcattggctgttggcccctttgaaatactggttgatccttacatgcacgaagtaaca
catttctgcctgccccaattgttgccacttctgaaacataccacatcctttcttcatgag
atttttgagttctatgaagagatcctgacctgcagatacccctatgcctattataagact
gtatttgttgatgaagcatatgtcgaagtagcttcatatgcttctatgagtattttaagc
acaaacctcctgaacagtgccatgattatagatcagacgcctcttaccagacgatgttta
gcacaagctctggctcagcagttctttggctgttttatttccagaatgtcttggtctgat
gaatgggtgttgaaaggaatatctggatacatttatggcttatggatgaaaaaaacattt
ggtgttaatgagtacagacactggattaaagaggagctggacaaaattgtggactacgaa
ttgaaaactggtggtgttttgttgcatccaacatttactggagtgaaagagaaagaaacc
ccagcaccgcacttgcatttttcaattcggcatccacatactttgtcctggaattactac
aagatgtttcagtgcaaagctcaccttgtgatgcgactcattgaaaacaggattagcatg
gaattcatgcttcaggtcttcaacaaactgttgagtttggccagcactgcttcttcacag
aagttccaatcacatatgtggagccagatgctgctttcaacgactggatttttaaaatca
atttcaaatgtgtctggaaaagatatccaacctctaataaagcaatgggttgaccagagt
ggtgtagtgaagtttttcggcagctttgcattcaatcggaaacggaacatcttggaactg
gaactgaagcaggattacacttctttgggaactcagaaatatgtgggaccgcttaaaatt
accgtacaagagcttgatgggtcgtttaaccacactctacaaattgaggaaaacagctta
aagcatgatattccttgccattccaagagcagacggaataagaaaaagaagattccgttg
ttgaatggtgaggaagtagacatggatctttctgcaatggatgccgattccccgctgttg
tggataaggatagaccctgacatgtctgttttgaggaaagtggaatttgagcaggctgat
ttcatgtggcagtaccagcttcgctatgagagagacgtcgttgcacaagaagaatcaatt
ctcgctttagagaagttccccactccagcctctcgactggcattgacagatatcctagaa
catgaacaatgcttttacaaagtccgaatgcatgcctgcttccggcttgcaaagattgca
aatgccatggtgaacacttggacaggtcctccagcaatgaagtcgctcttcactcgaatg
ttttgctgtaaaagctgttcaaatattgttaagaccaacaatttcatgaacttccagagc
tactttttacagaagacaatgcctgttgcaatggcgttactaagagatatccataaccag
tgtcctaaggaagtgctggcctttattttggacttaataaaatataatgacaacaggaag
aacaagttttcggacaactactaccgtgctgaactaattggtgcactttccaattcagta
acacctgcaattagcattaataatgaggttcggacattagataatctcaatcctgatgta
agattgattttggaggagataaccagatttctaaacatggagaagttgctaccaagttac
aggaatacaataactgtcagctgcctgaaagctattcgagtgcttcagaagaatggccac
attcccagcgatccgtcactctttaagtcgtatgcagaatatggacactttgtcgatgtt
cgcattgcagctctggaagcagttgtagattatacacaagtggacagaagcactgatgag
ttacagtggctattagatctggtccagaatgatgcagtgccctacataagacataaagtt
ttgagtatgctcaataaaaatccacctttcaccaagaacacagactcttccttgtgctct
gaggcattggtggaccaactctggaaactaatgaactcaggaacctcccacgactggaga
cttcgctgtgatgctgtggacatgtactatacattgtttggcctcagccgaccctcatgc
cttcctctaccggaattgggccttgttctcaacttgaaggaaaagaagactgtgctgaat
cctattattattcctgagacaggaggaagtggccaagaaactttgggcagtgcaagcatg
catggattaatacctggcttccagattaatgaggaagaccatcttgctaaggaccctgca
tccactatacctggagcgcagagtgtgaagagaaaagccgagactccacttggctctcca
ctggaacctggccaagttctggaaaaagatgaagacaacagcaaagttaaactaaaaatc
aaattttctaattctcaagaagatgaagagattgacatggactctgttcatgatagtcag
gcctttatatatcatcaactgaacatacttgaacgaccatctacaccagggaaagaaaca
ccagctgtggaaactggcatggtttccatgccaactaccccagttccttcacttggcaaa
gagtcaagctcatcgaggcatggggaccaccaccaccatcaccatcatgagcacaagaaa
aagaagaagaagcataaacacaaacataagcataaacacaaacatgatgggaaagataaa
gaaaaagacctgtttactttctcaaacagcccagctagtggacggtctcttaattctcct
tcaatttctgactga
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integrated database retrieval system
