Hemitrygon akajei (red stingray): 140715809
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Entry
140715809 CDS
T11019
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
140715809
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
haka01009
]
140715809
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
haka04515
]
140715809
Protein phosphatases and associated proteins [BR:
haka01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140715809
Cell adhesion molecules [BR:
haka04515
]
Cadherins
Protocadherins
140715809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
MAP17
DUF6377
TMEM154
EphA2_TM
RCR
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
140715809
NCBI-ProteinID:
XP_072884305
LinkDB
All DBs
Position
2:136066080..136861267
Genome browser
AA seq
1477 aa
AA seq
DB search
MDMRDFYLFLALAACLTVDSALAQELVYTIQEEMPENILLGSIPRDLNISRFNAATGASA
NLIYRLVSKAGEVPLLRVSSGTGEIFTTANRVDREKLCAGTYTDTDCFFEVEVVILPNDH
FRLVKIKVVVRDVNDNAPMFPSPVINISIPENTLVNSRFPVPSATDPDTGSNGVQRYQLL
NGQGAYGLDVVESPEGEKWPQLIVQRSLDREQKDTYVMKIKVEDGGSPQRSSTAILQVTV
TDVNDNRPVFKESQLEVRLPENAPLGTSVIQLHATDADVGSNAQIRYLFSPQVSPSVRRH
FALNATAGLITVQRALDREETSLHKMTVLATDGSSTPARATVTVNVTDVNDNPPTIDIRY
IISPINGTVYLSEKDPINTKIALITVSDKDMDVNGKVVCYIEKEVPFHLKAVYDNQYLLE
TSALLDYESTRDYSFRIVASDSGKPSLNQSALVRVRLEDENDNPPVFSQPVIELSVAENN
HRGLYLTTISATDEDSGKNAEIVYQLGPNASSFDLDRKTGVLTASRVFDREEQERYIFTV
TARDSGNPPLQSQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDADAG
ENAEVMASVVGDNDNFILDPVSGVIRSNVSFDRELQSSYTFEVKAIDRGRPVRTSIAKVT
INVIDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDVDTGMNAELKYSIVSGNS
KGLFRIDPVTGNITLEEKPTVADQGLHRLVVNISDLGYPKPLHTLVLVYLYVNDTVSNAS
YINELIRRTMETPLDKNIGDSTQPWQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRQSR
FKATQRNKQGAEWMSPNQESKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDPAHEPINGA
ITIPAELEEQTIGRFDWSTTPPSTFKPSSPDLARHYKSGSPQPSFHLKPDTPVSAKKHHV
IQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQSQRRVTFHLPD
GSQESCSDSGLGDHEPVNGGPLISHPLPLVQPQDEFYEQASPDKRTEADGNSDPNSMYMP
SSTNIMYRVSTGGKLTKMAFRVTKQQKPMFSMLATCMLVKRFTKLQRLFLATKSKMPGNE
GHRRSCNLTAAKVNKVSKLGRAVKGFRKRISDLRLGARRNGACYIKRGAVQHSEVSKEKA
LTWEEEKVTPIVHLVEHRPGASCDSSDSDECCTSERVRPEQHQITVTMEEKASARTQGLG
MVKQGIETEQVPQGSYEERREDTAGGQWRAATYMKVPPSEYQGAHQSEAIRAAASSVPPH
SHNTHEGDLCPICRRLDTLVSTVQRGFNHLHRDVNTLQNVSQYRGARLSQNVMSLVGAMH
TLVRLHHFSALPRRDVAIQTSIVLTERSQGTNVGAASNNPLTTSTETMVVSTDNVQPSSN
TTEPRDTVVEVSLDPDGDSTESMSIEESSLNSSDNDW
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggacatgcgggatttttacctgttcctggcgctggccgcttgcctgactgtggattcc
gctctggctcaggagctggtctacaccattcaggaggagatgcccgagaatatcttgctg
ggcagcatcccgcgcgatctgaacatttcccggtttaatgcggccacgggggcgagcgcc
aacctcatctacaggctggtctccaaggctggggaggttcccttgctccgggtgtccagc
ggcaccggcgagatcttcaccacagccaaccgggtggaccgcgagaagctgtgcgctggc
acttacaccgacaccgactgcttcttcgaggtggaggtcgtcatcctgcccaacgaccac
ttcaggctggtcaagatcaaggtggtggtgcgggacgtcaacgacaatgcgcccatgttc
ccgtctcccgtgatcaacatctccatcccggagaacacgctggtcaacagccgcttcccg
gtgccttccgccactgacccggacacgggcagcaacggggtgcaacgttaccaactcctc
aacggccagggggcttatggcttggacgtggtggagagtcctgagggcgagaagtggcca
cagctgattgtccagcgcagtctggaccgggagcagaaggacacctatgtgatgaaaatc
aaggtggaggatggggggagccctcagaggtccagcactgccatcctgcaggtgacagtc
actgatgtcaatgacaaccggccggtgttcaaggaaagtcagctggaggtccgtctgccg
gagaacgcacccttgggcacctcagtcatccagctccatgccactgacgccgacgtgggc
tccaatgcccagatccgctacctcttcagcccacaggtctcgccgtccgtccggagacac
tttgccctcaacgccactgctggcctcatcacggtgcagagggctctggaccgtgaggag
acgtccctgcacaaaatgacggtgctggccaccgatggcagttccacccctgccagggcc
actgtcactgtaaatgtcactgatgttaatgacaacccacccaccatcgacatccgctac
atcattagccccatcaacgggacagtctacctgtctgagaaggatccgatcaacaccaag
atcgccctgatcactgtgtcggacaaggacatggatgtgaatgggaaggtggtctgctac
atcgagaaggaagtacccttccacctcaaagctgtgtacgacaaccagtaccttctggag
acctctgccttgttggactatgaaagcacaagagactacagtttcaggatagtggcctcg
gactcgggcaagcccagtctgaatcaaagtgcgctggtccgagtgaggctggaagatgag
aatgacaaccccccggtctttagccagcctgtcatcgaactctctgtggctgaaaacaac
caccgtggcctctacctcaccaccatcagcgccaccgacgaggacagcggaaagaatgct
gagatcgtctaccagctgggtcccaacgcctcttcctttgacctggaccgcaagactggg
gtgctgactgcctccagggtttttgaccgggaggagcaggagcgttatattttcaccgtg
acggccagggacagcggcaacccccctctccagagccaggcggctgtgattgtcacagtg
ctggatgaaaacgacaacaaccccaagttcacccataaccacttccagttctttgtgtcc
gagaacttgccaaagtacagcaccgtgggggtcatcacagtgacggatgcagatgctggg
gagaatgcggaagtgatggcttctgttgttggtgacaacgacaacttcattttggaccca
gtgagcggcgttataagatccaatgtgtcctttgacagagaactgcagagctcgtacaca
tttgaagtcaaggcgatagacaggggcagacctgtccgtacctccattgccaaagtcacc
atcaatgtcatagatgtcaatgacaacagcccggttgtaatctatccaccatcaaacact
tcattcaaactggtgcctctttcagccatccctggatcagtggtggcagaggtgtttgcg
gtggatgttgacacggggatgaatgcagaactcaagtacagcatcgtcagtggaaatagc
aagggcttgttcagaatcgatccggtgacgggcaacattactctggaagagaagccgact
gtggcagatcaaggtttgcaccgcctggtagtgaacatcagtgacttggggtatcctaaa
cccttgcacaccctggtccttgtctacttgtatgtgaatgacacagtaagtaacgccagt
tacatcaatgagctcataagaagaacgatggagactcctttggataagaacatcggggac
agtacccagccctggcagaatgaggactatctcaccatcatgattgccatcgtcgcgggg
gccatggtggtgattgtggtcatttttgtcacagtgctggtgcgttgccggcagtcgagg
ttcaaagccacacagaggaataagcagggggcagagtggatgtccccaaaccaagagagc
aagcagaacaagaagaagaagaggaagaaaaggaagtcccctaagagctctctgctcaac
tttgttacgatcgaagaatccaaacctgatgaccctgcccacgagcccatcaacggggct
attaccattccagctgagctggaggagcagactataggacgatttgactggagcaccaca
ccaccatcgacctttaagccaagtagcccagacctagcacggcattacaagtcgggatcg
ccgcagccctcttttcatctaaagccagacactccagtttccgcaaaaaagcaccatgtg
attcaggagcttcctttggacaacaccttcgtcgggggctgcgataccttgtccaagcga
tcctctaccagctcagaccacttcagtgcatcagagtgtagttcccaaggtggcttcaag
acaaagggtcctttgcacaccagacagtctcagagacgcgttacatttcacctccccgat
ggctcccaggaaagctgcagtgatagtggtctgggagaccacgagccggtaaatggtggc
ccgctgatctcacaccctctccctctggttcagccgcaggacgagttctacgagcaggct
tccccagacaagaggaccgaagccgatggcaattccgaccccaactccatgtacatgcct
tcatcaactaatatcatgtacagagtttctacaggcggaaagctgacgaaaatggcgttc
agagtaaccaagcagcagaagcctatgttctccatgttggctacatgcatgcttgtgaaa
aggtttacaaaattgcaaagattattcctggccacgaaatccaaaatgcccggtaatgaa
gggcatcgccgcagctgcaaccttacagctgccaaagtcaacaaggtttccaagctaggc
cgagcagtcaaagggtttcgaaagcgtatcagtgacttgcggcttggcgctcggagaaat
ggcgcatgttacataaagagaggggcagtccagcactcagaggtgtccaaagagaaagcc
ctaacatgggaggaagagaaagtgaccccgatagtccaccttgtggaacatagacctggt
gcatcctgtgactccagtgactctgatgagtgttgcacgtcggaacgtgtcagaccagag
caacatcaaatcacggtgacaatggaggagaaggcgtctgcccggactcaaggactcgga
atggtgaagcaaggtatagagactgaacaggttccacaaggctcatacgaggaacgtaga
gaagacaccgcaggtggacaatggagagcagccacttacatgaaagtgcccccttcggaa
taccaaggggcacatcagtcagaggctataagagctgctgcatcctctgtcccaccacat
tcccataacacacacgagggagacctgtgccccatatgccgcaggctagacaccctggtg
agcaccgtgcagcgtggattcaaccacctgcacagggacgtcaacacactgcagaatgtc
tcgcagtaccgtggggcccgtttgtcccaaaatgtgatgtctctggtgggtgcgatgcac
acgctagtgaggctgcaccatttctctgccttgccccgtcgagatgtggccattcagacc
tccattgtcttaacagagaggagtcaggggacgaatgttggggcagcatccaataacccc
ctgactacctccactgaaacaatggtggtgtcgactgataatgtccagccatccagtaac
acgacagaacccagagacacagtggttgaagtgtcactcgatcctgatggcgactctact
gagagtatgtccattgaagagtcctcactaaactcttccgacaatgactggtaa
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integrated database retrieval system