Hemitrygon akajei (red stingray): 140715926
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Entry
140715926 CDS
T11019
Symbol
matn1
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
haka04990
]
140715926 (matn1)
Domain-containing proteins not elsewhere classified [BR:
haka04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
140715926 (matn1)
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Ortholog
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GFIT
Motif
Pfam:
VWA
VWA_2
FXa_inhibition
Matrilin_ccoil
EGF_CA
cEGF
EGF
EGF_3
Copine
EGF_LRP2
hEGF
Motif
Other DBs
NCBI-GeneID:
140715926
NCBI-ProteinID:
XP_072884575
LinkDB
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Position
24:complement(18497403..18525576)
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AA seq
539 aa
AA seq
DB search
MLIPGAGPVLCHTSLISCNCSLNKMKGLLNGLLLSALILVQVNSELTLKAKPPAGLCRTK
PTDLVFIIDSSRSVRPKEFEQVKVFVSKVIESLDIGPNATRVGLVNYASTVKNEFSLKTH
RTKASLLRAVSQIEPLSSGTMTGLAILFSTNVAFSEANGARVKLTDASKVAIIVTDGRPQ
DQVRDAANHAKQKGIEIFAIGVGKAEMKSLREIASEPLEDHLDYVESYSAIEKLSKKFKE
ALCVADLCASGDHDCEHICISTPGSYKCACKEGLMLNPDGRTCGTCSSGAVDLGFIIDGS
KSVRPENFELVKKFINQIIDSLDVGDQQARVSLVQYSSSVRTEFPLNKFKTKQSIKAAVK
KMEYMERGTMTGLALQHLSEKVFVPSQGARENIPKVGIVFTDGRSQDYINDHAQKIKAKG
VKMFAIGVGNALEEELRMIASDPVKDHYYYTADFKTMNQIADKLQVKICVEPEDPCACES
LVNFQTKVEKIIKTLTSKHILLISRAVYLCINILCRPPLVSVDHGAISFIIIIIMYCVV
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgttaatacctggagccggccccgttctctgccacacaagcctgatctcctgtaactgc
tcgctcaacaagatgaagggacttctcaacgggctgctcctttctgccttgatcctagtt
caagttaactcggagcttacacttaaagcaaaacctccggcaggtctttgccgaactaaa
ccaaccgatctggtcttcatcattgacagctcgcggagcgtccgcccaaaagaatttgaa
caggtgaaagtatttgtatccaaggtgattgaatcccttgacattggcccaaatgccacc
cgggttggactggtcaactatgccagtacagtcaagaacgaattcagcctcaaaacacat
cgcaccaaagccagcctcctgcgagctgtttcccagatcgagccactttcttcgggcact
atgaccggcttggccatcctattttctaccaatgtcgctttcagtgaggctaacggggca
cgagtgaagctaactgatgccagcaaggttgccatcatcgtgaccgatggccgcccccag
gaccaagtgcgagatgctgccaaccacgccaaacagaaaggcatcgagatctttgcgatc
ggtgtgggcaaggcagagatgaaatccctgcgtgagattgccagtgaacccctggaagac
catttggactacgtggaaagctacagtgccatcgaaaaactttccaagaagtttaaggaa
gctctttgtgttgcggatctgtgtgcaagtggggatcatgactgtgagcacatctgcatc
agtactcctggctcttacaagtgtgcctgcaaagaagggttaatgttaaacccagatgga
cggacgtgtggaacttgcagttcaggagccgtcgatttgggcttcattatcgatggatca
aagagtgtgaggcccgaaaacttcgagctggtcaaaaaattcatcaatcagatcatcgac
tccctcgatgttggcgatcagcaggcccgggtttctcttgttcagtactcgagctcagtc
aggacagaattccccctcaacaagttcaaaacgaagcaaagcatcaaggcagcggtcaag
aagatggagtacatggagagaggaacaatgacaggcctggctctgcagcatctgtctgaa
aaggttttcgtcccgtcacagggagcacgagagaacatcccaaaagtcggcattgtcttt
actgacgggcgctcacaggattatattaatgatcatgcccaaaagatcaaagctaaaggg
gttaagatgtttgcaattggagtggggaatgccctggaagaagaattaaggatgattgct
tcagatccagtcaaagatcattactattataccgcagatttcaaaacaatgaatcaaatt
gcagacaaattacaggttaaaatatgtgttgaacctgaagacccatgtgcctgcgagtca
ctcgtgaatttccagacaaaggtggagaaaataattaaaacactgacgtccaaacatatc
cttttaatctctcgtgcagtttatctgtgtatcaatatattatgtaggcctccgttagtc
tcggtagaccatggagcaatcagtttcatcatcatcatcattatgtactgtgttgtatga
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