Hemitrygon akajei (red stingray): 140715929
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Entry
140715929 CDS
T11019
Name
(RefSeq) uncharacterized protein isoform X1
KO
K16337
syndecan 3
Organism
haka
Hemitrygon akajei (red stingray)
Pathway
haka04514
Cell adhesion molecule (CAM) interaction
haka04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
140715929
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
140715929
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
haka00535
]
140715929
Proteoglycans [BR:
haka00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
140715929
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
SCY_4732_
Motif
Other DBs
NCBI-GeneID:
140715929
NCBI-ProteinID:
XP_072884584
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All DBs
Position
24:complement(19294976..19583524)
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AA seq
375 aa
AA seq
DB search
MLNKEYQYRERAEQASCKLQDHNWMYRTSRQTQDLATLTDLEGSGSDDEDEGFYSGSGGS
GYPDFESELRLTTGVTRAVTVTPSTSAFSSVQPFAFTFRSTTLTSGSGTRAPAPTSAAPA
TQQAATAAPAPATVPASATTPRATTASTGAATTSTVQAPTARSSTVAVVPLATTVITATT
KQSTTSLGDVARPISTPDPQTDRATLESFTAGTSKTILSTPYITEKTSSSEQVEEVTINN
EVEAPAAGSPSGDFEITEEVEVVNREANNEVLAAITQPTVRGTGKIDLPDIIDNAIDSGS
SSSAAQLPQKNILERKEVLVAVVVGGVVGALFAAFLVMLLIYRMKKKDEGSYTLEEPKQA
SIAYQKPDKQEEFYA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacaaagagtaccagtacagagaacgtgcagagcaggcgagctgtaaattgcaa
gatcataactggatgtatcgcacatcgagacagacccaggacctcgcaacgttaaccgat
ctggaaggatcagggtcggatgacgaagatgaaggattttactctggctccgggggttcg
ggataccccgacttcgaaagtgagctgaggctcaccacgggtgtgaccagggcggtgaca
gtcacgccctccacctctgccttcagctcggtccagcccttcgccttcaccttcaggagc
accaccttgacgagcggcagcggcacccgagcgccggcccccacctccgccgcccccgcc
acccagcaggccgccacagcggcgccggcccccgccacagtgcccgcctccgccacgacc
ccgcgggcgaccacggcgagcacgggcgcggccacgacctccaccgtccaggctccgact
gcccgcagcagcaccgtcgctgtcgtcccgctggccaccacggtgataacggccacaacc
aagcagagtacgaccagcctgggagacgttgccagacccatttccacgcctgacccgcag
acggatagagcaactttagaaagcttcacggcaggcacgagtaaaaccatcctgtccact
ccttacatcacagagaagacgagctccagtgagcaggtggaagaggtgaccattaacaat
gaagtggaggctccagcggcaggttctcctagtggagacttcgagatcaccgaggaagtg
gaagtggtgaaccgcgaggcaaataacgaagtgcttgcagctatcacacagccaacggtc
cggggcactgggaaaattgacctgcccgatatcatagacaatgcaatagactctggcagt
tcatcatcagctgcacaattaccccagaagaacatattggagaggaaagaagttttagta
gcggtcgtcgtcgggggagtggtcggagccctcttcgccgccttcctggtcatgctgctg
atctaccgaatgaagaaaaaggacgaaggcagctacacgttggaagagccaaagcaggcg
agcatagcttaccaaaaacccgacaagcaggaggagttttacgcataa
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