Hemitrygon akajei (red stingray): 140716034
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Entry
140716034 CDS
T11019
Symbol
apex2
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haka03400
]
140716034 (apex2)
Enzymes [BR:
haka01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
140716034 (apex2)
DNA repair and recombination proteins [BR:
haka03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
140716034 (apex2)
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
140716034
NCBI-ProteinID:
XP_072884801
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All DBs
Position
24:42668616..42674551
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AA seq
514 aa
AA seq
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METAGPESGLRLVSWNMNGIRARGKQLRPTLLSLGAHIICLQETRVSRDLLEEDVAILEG
FNSYFSHSRTRTGYSGVATYCTDDVAPFAAEEGLSGVLSGSGAPLPLGLTDQFSDQELRQ
LDSEGRALITKHRLRLSEEGERTLAVINVYVPRADPDNQQRLQFKLRFCQLLQARAEALL
RDGEIVLVLGDLNISHRPIDHCQPGDLDEFAAQPGRRWLDGFVCQEEEEEEEGTGGRLFV
DTFRLFHPGRLEAYSCWQTSTGARETNYGTRIDYVLAGGPQARRWLGGCDLLTEVRGSDH
CPVRAWLRARCLPAARLPPLCTKHLPEFAGVQQTLSRFLVALPRPDHGPPSPLASGEEGA
EFRLGARANSHLNEGAKSGQGAEAGAKPRPAIGGRRGKKVNGRPCPSGNLLAYFKPAGGE
GAGSRSPSPLPPSSPPTGASEGVAPPPADFWKGLLRGRPPPPACPGHGEPCVLRTVRKAG
PNRGRGFYSCRRPPGPPHNPASRCGFFRWADSSG
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgcgggcccggagtccggcctccggctggtcagctggaacatgaacgggatc
cgggcccgcgggaagcaactgcggcccacgctgctgagtctgggcgcccacattatctgc
ctgcaggagacccgagtgagccgagacctgctggaggaggacgtggccatcctcgagggc
tttaactcctacttcagccacagccgtacacgcactggctactcaggtgtggccacctac
tgcacggatgacgtcgccccgtttgcggcagaggagggtctttcgggggtgctctccggg
agtggggcccctctccccctggggctgaccgaccagttctctgaccaggagctccgacag
ctggacagtgagggccgggccctcatcactaaacaccgcctacggctgtcggaggagggg
gagaggactctcgctgtgatcaacgtttacgtcccccgggccgaccccgacaaccagcag
cgcctccagttcaaactgcgtttctgccaactgctgcaggccagggccgaggccctgctt
cgggacggagagattgtgcttgtactcggagacctgaacatctctcatcggcccattgac
cactgccagcccggagacctggacgagttcgctgcccagcccgggcgaaggtggttggat
gggttcgtgtgccaggaggaggaggaggaggaggaagggacaggaggtaggctcttcgtc
gacaccttccggctcttccacccgggccggctggaggcctacagctgctggcagaccagc
acgggcgcccgggagaccaactacggcacacgcatcgactacgtcctggctggcggcccc
caggcccggcgctggttggggggctgcgacctgctgaccgaggtgcggggctcagaccac
tgccccgtgcgggcatggctcagggcccgctgcctgcccgcagcccgcctccccccgctc
tgcaccaagcacctgccagagtttgccggggtccagcagaccctctcccgtttcctggtc
gccctgccccgccctgaccatggtccaccctccccgctggcttctggggaggagggggca
gagtttcggctgggagccagggccaactctcacctaaacgaaggagccaagtctggccaa
ggggcagaagcgggggccaagcccaggccggcgataggtggcagaagggggaagaaggtc
aatggacgcccctgcccgtctgggaacctgctggcctacttcaagccggcgggcggtgag
ggtgccggctcccgttccccgagccccctgcccccctcctcccccccgactggggcctcg
gagggggtggcgccaccccccgctgacttctggaaggggctgctgagggggaggcccccg
cccccagcctgccccggccacggcgagccctgcgtcctgcgcacggtcaggaaggctggc
cccaaccgcgggaggggcttctactcctgccgccgcccccccggaccaccccacaacccc
gcctcccgctgtggattcttccgctgggccgactccagcgggtga
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