Hemitrygon akajei (red stingray): 140716037
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Entry
140716037 CDS
T11019
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140716037 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haka03041
]
140716037 (prpf31)
Spliceosome [BR:
haka03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
140716037 (prpf31)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
140716037
NCBI-ProteinID:
XP_072884806
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Position
24:complement(43663243..43694716)
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AA seq
504 aa
AA seq
DB search
MSLADELLADLEEAAAEDAEETYVDEEEDGVAVEVLEEEMPEADADSIKSIAKLRDSKLF
ADIISKVGEYIGKQRKTEVTGPVESDPEYKLIVDANNLTVEIDNEINIIHKFVRDKYSKR
FPELESLVPSALDYIRTVKELGNNLDRCKNNENLQQILTNATIMVVSVTASTTQGQLLTD
GELSTVLEACRMGLELNQYKHQIYEYVESRMSLIAPNLSVIVGASTAARIMGMAGGLTNL
SKMPACNIMLLGSQRRSLSGFSSTSVLPHTGHIYHSDIVQSLPQDLRRKAARLVAGKCTL
AARVDSFHESSEAKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRK
MKERLGLTEIRKQANRMCFGEIEEDAYQEDLGFSLGTLGKSGSGRVRAAQVNEATKARIS
KSLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQKYFS
NLAEFLKVKREKDEVPQNGAAAAR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggcagacgagctgctggcagacttggaggaagcggcggctgaggatgcagag
gagacatatgtcgacgaggaggaggatggcgtggccgttgaagtgctggaggaggagatg
ccagaggcagatgctgactccatcaagagcattgctaaactgcgggacagcaagctgttt
gcagacatcatttccaaagtgggcgaatacattggcaagcagcgtaaaacggaagtgaca
ggccccgtggaatcagatccagagtataagctaattgtggatgctaataatctgaccgtg
gagatcgataatgagataaatataatccacaagtttgtccgggataaatattccaaacgc
ttccctgagctggagtcccttgttcccagtgcactggactacatccggacagtcaaggaa
ttggggaataatctggaccggtgcaagaacaacgagaacttgcagcagatcctgaccaac
gccaccatcatggtggtcagtgtgacagcctccaccacgcagggacagctgttgacagac
ggagaactctccactgtgctggaggcctgccgcatgggtctggagttgaaccagtacaaa
caccagatctacgagtacgtggagtctcgcatgtccctcatcgcccccaacctctctgtc
atcgtgggggcctccaccgctgccaggataatggggatggcaggtggcctcactaacctg
tccaagatgccagcctgtaacatcatgttactgggctcccagcgtcggagtctttctggt
ttctccagcacctccgtcctgccccacaccggacacatctaccatagtgacatcgtccaa
tccctacctcaggacctgcggaggaaggctgcccgactggtcgcaggaaagtgtaccctg
gctgcacgggtggacagtttccatgagagctctgaggcgaaggtgggctatgacctgaag
gaggagattgagaggaaatttgataagtggcaagaaccccctccagtgaagcaagtcaaa
ccacttcccgcccctcttgatggtcaacggaagaagaggggagggcgcaggtatcgtaag
atgaaggagcgcttgggtctgactgaaatccgaaagcaggcaaaccgcatgtgttttggc
gagatcgaggaggatgcctaccaagaggatctgggatttagcctgggaacactggggaaa
tctggaagtggccgggtgcgggccgcacaggtcaatgaggcaaccaaagcgcggatctcc
aagtcactacagcggacacttcagaagcaaagtgtggtatacggagggaagtccaccatt
cgcgaccgctcctcggggactgcatccagcgttgccttcacgccattacagggcctggag
atcgtgaacccacaggcagctgagaagaaagtggccgaggccaatcagaaatatttctcc
aatctcgccgagttcctcaaggtgaagagggagaaggatgaggttccgcagaatggggct
gctgctgcccggtga
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