Hemitrygon akajei (red stingray): 140716261
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Entry
140716261 CDS
T11019
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8-like
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
140716261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
haka03036
]
140716261
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
140716261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Myb_DNA-bind_7
Chromo_MIT1
MUN
Motif
Other DBs
NCBI-GeneID:
140716261
NCBI-ProteinID:
XP_072884971
LinkDB
All DBs
Position
25:27118290..27177566
Genome browser
AA seq
2003 aa
AA seq
DB search
MGLIGSNGNDFGISASKDEDQRACTCAENPSEEDAAIVDKILSFRVAKKEVYQGQYMEVE
EFYVKYKNYSYLHCEWATLQQLEKDKRIHQKIKRFKAKMAQMRHIFHEDEDPFNPDYIEV
DRLLEESHSVDKDNGEPVVYYLVKWCSLPYEDSTWELKEDVDEAKIEEFERLQARKPKLT
HVERPPAKAWKKLDQFREYKNDNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQS
ITFLEEVYSAGIQGPFLVIAPLSTITNWEREFSTWTDMNAIVYHGSLASRQMIQQYEMYF
RDPKGHFIPGAYRFDALITTFEMILSDCPELREIAWRCVIIDEAHRLKNRNCKLLEGLKL
MELEHKVLLTGTPLQNTVEELFSLLNFLEPSQFPLESAFLQEFGDLKTEEQVQKLQALLK
PMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILERNFTFLAKGAGQANVPNLLN
TMMELRKCCNHPYLINGAEEKILGEFRETHDPTALDFHLQAMIQSAGKLVLIDKLLPKLK
AGGHKVLIFSQMVRCLDILEDYLIQKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL
LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYERE
MFDKASLKLGLDKAVLQSMSSRENNINGIQQFSKKEIEDLLRKGAYGAIMDEEDEGSKFC
EEDIDQILSRRTTTITIETEGKGSTFAKASFVATGNRTDISLDDPNFWQKWAKKADIDLD
MVNRRNNLVIDTPRVRKQTRPFNTTKDDDVDFSEMDSDSDERPKSRRSHERRHGYGRTEC
FRVEKNLLVYGWGRWKDILAHGRFKRRMSERDVEVICRTILVYCLLHYRGDEKIKGFIWD
LITPTENGQTKELQNHSGLSAPVPRGRKGKKIKSQSSSFDVQKADWIRKCNPDVLLQDDS
YKKHLKHHCNKVLLRVRMLYYLKQEVIGDQSDRVLDGADTNDIDVWIPEVDGMEVPAEWW
DMEADKSLLIGVFKHGYEKYNTMRADPALCFLEQVGRPDEKAIAAEQRGMDMFGDLGDGG
DFERDLEDPEYKPLILGREHRDDDGDGMVLDEDISVDGDDGEARKDVLMGAGLSSQCRYW
PMPSVLTARLRRLVTAYQRSYKQEQQKMEAAERGDRKRRRCEAAFKLKEIARREKQQKWT
GREESDFYRAVSTFGVEFEPHTRRYRWDRFRDIARLERKTDETLTRYLQMFMAMCRRVCG
LPLEEGEEYPEPSLLVRQLTEERATRALYRIDLLRRVREQVLCHPLLAERLQLCQPSAEL
PGWWESGRHDLELLQGAARHGLRRAHARLLCDPCLSFHACRLAHLQGHPPSPACCPVRGT
GGCSPPPGDWERETDSDLDRSSLADSCPSSSEESDGDGACAEARSLSKNYDEESTISLNT
SRDETQDGFPSDELEPSLGNLLHDKQLPVPSWPKDRVLINRINMVCHTVLNGCWPTPRRA
QCDPARCPQACPGTPSLVESPEETPVPTPGSLTIDEDTPSASFTKVKKHAREKEFTVKIN
NEDGLKLTFHKQRRRPRKPEDEEGEGSRGPEFTPSQSASDSGPETECPRTTLLTPSALLD
HSFPLREGGSPNPHTVRCQLDAVLSAGSSPLWRHSVNGQLAGAQSLGKKRRGRRRNVERG
ELLQPSPSQGLCTANGEVERTMEEPQTQPRRPEPDMETRIPVVSKLDGTVLAGDEAPRRR
ELDQWLKLNPDFAVDPSCLAFVEDRPKQKRHRCRNPHKLDVNTLTGEERVPVINRRNGKK
LGGGFAPPIKDLQKWLQDNSEYGVAQEWADVIKQSGFLAEDMYDRILSGPVVPEEGRKRG
RRPKHLTAALQVNSLLEGGGLRSLQQELPALQIPGLVGYPQAPAPTQSQTGLSEPPPGPS
LPLSPLLLPAVYGGSVYLGPGATELSLGALDGARGLGAVRVEGGAADDHLSQGYDSGEEG
GGYCHSLMGDPMMPTNSDLSGED
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atgggcctaattgggtcaaatgggaacgactttggcatcagtgccagcaaggatgaggac
caaagggcctgtacctgtgctgaaaaccctagtgaagaagatgctgctatcgtggataag
atcctctcgttcagggtggcgaagaaggaggtgtaccaaggacagtacatggaggtggag
gagttctacgtcaagtacaagaactattcgtacctgcactgcgagtgggccaccttgcaa
cagctggagaaggacaagcgcatccaccagaagatcaagcgcttcaaggccaagatggcc
cagatgaggcacatttttcacgaggatgaagaccccttcaaccctgactacatcgaggtc
gatcgactgctagaggagtcccacagtgtggacaaggacaatggcgagccagtggtctat
tacctggtgaaatggtgctccctgccttacgaggacagcacctgggagctgaaggaggac
gtggacgaggcgaagatcgaggagtttgagcggctccaggcccggaagcccaagctgacc
catgtggagcgcccgccggccaaggcctggaagaagctggaccagttccgggagtacaag
aacgacaaccagctgcgcgagtaccagctcgagggcgtcaactggctgctcttcaactgg
tacaacaggcagaactgcatcctggctgatgagatgggcttggggaagaccattcagtcc
atcaccttcctggaggaggtgtactctgctggtattcagggccccttcctcgtcatcgcg
ccgctctccaccatcaccaactgggagagggagttcagcacctggaccgacatgaacgcc
atcgtctaccacggcagcctggccagccggcagatgatccagcagtatgagatgtacttc
agggatcccaagggtcactttatcccgggagcctaccgcttcgacgcgctgatcaccacc
ttcgagatgatcctgtcggactgcccggagctgagggagattgcctggcgctgcgtcatc
atcgacgaggcccaccgcctcaagaaccgcaactgcaagctgctggagggcctgaagctg
atggaattggagcacaaggtcctcctgaccgggacacccctgcagaacacggtggaggag
ctgttcagcctgctgaacttcctggagccctcgcagttccccctggagtcggccttcctg
caggagtttggggatctgaagacggaggagcaggtgcagaagctgcaggccctgctgaag
cccatgatgctgcgtcgcctcaaggaggacgtggagaagaacctggcgcccaaggaggag
accatcatcgaggtggagctcaccaacatccagaagaagtactaccgtgccatcctggag
cgcaacttcacctttctggccaagggggcaggccaggccaacgtacccaacctgctcaac
accatgatggagctgcgcaagtgttgtaaccacccctacctcatcaacggagcagaggag
aagatcctgggtgaattccgggagacgcacgacccgacagcgctggacttccacctgcag
gccatgatccagtcggcgggcaaactagtgctgatcgacaagctgctgcccaagctgaag
gcgggcgggcacaaggtgctcatcttctcgcagatggtccgctgcctggatatcctcgag
gactacctcatccagaagaggtacctatacgaacggatcgacggacgggtgcgggggaac
ctgcggcaggcggccatcgaccgcttcagcaagccggactcggaccgctttgtgttcctg
ttgtgtacgcgggccgggggcctgggcatcaacctcactgctgccgacacctgtatcatc
ttcgactccgactggaaccctcagaacgacctgcaggcccaggctcggtgccatcggatc
ggccagagtaaggcagtgaaggtgtaccggctcatcacccgcaactcgtacgagagggag
atgttcgacaaggccagcctcaagctgggcctggacaaggccgtgctgcaatccatgagt
agccgagagaacaacatcaacgggatccagcagttctccaagaaggagatcgaggacctg
ctgcgcaagggtgcctacggcgccatcatggacgaggaggacgagggctccaagttctgc
gaggaggacatcgaccagatcctgtcgcgcaggaccaccaccatcaccattgagaccgag
ggcaagggctccacgtttgccaaggccagcttcgtggccactgggaaccggactgacatc
tccttggacgaccccaacttctggcagaagtgggccaagaaagccgacatcgacctggac
atggtgaaccgcaggaacaacctggtcatcgacaccccacgagtccgcaagcagacccgg
cccttcaacaccaccaaggacgatgatgtggacttctccgagatggatagtgacagcgat
gagcgccctaagtctcgcaggtcccacgagcgtcggcatggctacgggaggactgagtgc
ttcagggttgagaagaacctgctggtctatggctggggtcggtggaaggatatcctggcc
cacgggcggttcaagcggcggatgtcggagcgagacgtggaggtgatctgccgcaccatc
ctggtctactgcctgctccactaccgaggtgacgagaagatcaagggcttcatctgggac
ctcatcacgcccaccgagaacgggcagaccaaggagctgcagaaccactcagggttgtca
gccccagttccccggggccggaaggggaagaagatcaagagtcagagcagttcattcgat
gtgcagaaggctgactggatccgcaagtgtaaccccgatgtcctcctccaggacgacagc
tacaagaagcatctcaaacaccactgcaacaaggtgctcctcagggttcgaatgctttac
tacctgaagcaggaggtgattggagaccagtcggaccgggtgctggacggagctgacacc
aatgacatcgatgtgtggatcccggaggtggacgggatggaggttccggctgagtggtgg
gacatggaggctgacaaatcgctgctgatcggggtcttcaaacacggctacgagaagtac
aacacaatgcgtgctgaccctgccctctgcttcctggagcaggttgggcgaccggatgag
aaggccattgcggcagagcagaggggaatggacatgttcggtgacctcggtgacggcgga
gacttcgagagggacttagaagatccagagtacaagcccctcattctgggcagggaacat
cgcgacgatgatggtgatggaatggtgttggatgaagatatctcggtggatggggacgat
ggggaggcgcgcaaagacgtcttaatgggagctgggctgtccagccagtgccggtactgg
cccatgccttcggtgctgacggcccgcctgaggcggctggtcaccgcctaccagcgcagc
tacaagcaggagcagcagaagatggaggcagcagagaggggcgaccgcaagcggcggcgg
tgcgaggccgccttcaagctgaaggagatcgccaggcgtgagaaacagcagaagtggacg
ggccgggaggagtcggacttctaccgggcggtgtccaccttcggcgtggagtttgagccc
cacacacggcggtaccggtgggaccggttccgagacatcgcccggctagagaggaagacg
gatgagacgctcacccgctatctgcagatgttcatggccatgtgtcgccgggtgtgtggg
ctgcccctcgaggagggggaagagtacccggagccaagcctgctggtgagacagctgacg
gaggagcgagccacccgggctctgtaccgcatcgatctgctgcggcgggtgcgcgagcag
gtcctgtgccacccgctgctggcggagcgtctgcagctgtgccaaccctcggcggagctg
cccggctggtgggagagcggccgccacgacttggagttgctgcagggggccgccaggcac
ggcttgcgccgggcccacgcgcgcctcctctgcgacccctgcctctccttccacgcctgc
cgactggcccacctccagggacatcccccctcgcctgcctgctgtccagtcaggggcacc
ggaggctgtagcccccctcctggcgactgggagcgtgagacggactccgatctggatcgc
tcctccctcgccgactcctgtcccagctcctcagaggaaagcgacggggacggagcctgt
gctgaggctcggtcactctcgaagaactacgacgaggagagcacaatatccctcaacacc
tcccgggatgagacgcaggatggctttcccagtgatgagctggagcccagcctgggcaac
ctcttgcacgacaagcagctcccggtacccagctggcccaaggaccgagtgttgatcaac
cgcatcaacatggtgtgtcacacggtgctgaatggctgctggcccactccccggagggca
cagtgcgatcccgccagatgcccgcaggcctgccctggcaccccgtcgctggtggagagc
cctgaagagaccccggtgcccacgccgggaagcctgaccattgacgaggacaccccttcc
gcctccttcaccaaggtgaagaagcacgcccgtgagaaggagtttaccgtcaagatcaac
aatgaggacggactgaagttgacctttcacaagcagcgccgccgcccccgtaagccagag
gacgaggagggcgagggctcccgagggccagagttcacccccagccagtcagcctcagac
agcgggcccgagacagagtgcccccggaccaccctcctcaccccctccgccctgctggat
cacagcttccccctgcgggaagggggcagccccaacccccacacagtccgctgccagctg
gacgccgtgctcagcgccggatccagccccctctggaggcactcggtcaacgggcagcta
gccggcgcacagagcctgggcaagaaacggcgtggccggaggaggaacgtggagagggga
gagctgctgcagcccagcccaagccaggggctctgtactgcgaatggcgaggtggagcga
accatggaagagcctcagacgcagccacggcggccggagcccgacatggaaacccgtatc
cccgtggtcagtaagctggacggcacggtgctggcaggcgacgaagccccccggcgccga
gagctcgaccagtggctgaagctcaatcccgacttcgccgtcgatcccagctgcctagcg
tttgttgaggaccggccgaagcagaagcggcaccggtgtcggaatccccacaagctggac
gtcaacacgctgaccggagaggagagggtccccgtcatcaaccgccgcaacggcaagaag
ctgggagggggatttgctccaccgatcaaagacctccagaagtggctacaagacaactcc
gaatacggagtcgctcaggagtgggctgacgttatcaagcagtcgggattcctcgctgaa
gacatgtacgatcggatcctcagtggcccggtggtgcccgaggagggcaggaagaggggc
cggcgccccaaacacctcacagctgccctgcaggtgaactcgctgctggaggggggaggc
ctgcggagcctccaacaggagctgccagccttgcagatacccggcctggtgggctacccg
caggccccggcccccacccagagccagactggactctcagaacctccacctggaccctca
ttgcccctcagtcccctgctgctccctgccgtgtatggaggttctgtctacctgggacca
ggcgccactgagctgtcccttggggcgctggatggcgccaggggactgggggctgtgcgc
gttgagggtggagcagcggatgaccatctctctcagggttatgacagtggcgaagagggg
ggcggctactgtcactccctcatgggtgaccccatgatgcccaccaactccgacctgagt
ggggaggactga
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integrated database retrieval system
