Hemitrygon akajei (red stingray): 140716356
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Entry
140716356 CDS
T11019
Name
(RefSeq) uncharacterized protein
KO
K06237
collagen type IV alpha
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04382
Cornified envelope formation
haka04510
Focal adhesion
haka04512
ECM-receptor interaction
haka04518
Integrin signaling
haka04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140716356
04518 Integrin signaling
140716356
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140716356
09142 Cell motility
04820 Cytoskeleton in muscle cells
140716356
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
140716356
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
haka04147
]
140716356
00536 Glycosaminoglycan binding proteins [BR:
haka00536
]
140716356
Exosome [BR:
haka04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
140716356
Glycosaminoglycan binding proteins [BR:
haka00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
140716356
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
140716356
NCBI-ProteinID:
XP_072885110
LinkDB
All DBs
Position
2:complement(144108474..144174776)
Genome browser
AA seq
1476 aa
AA seq
DB search
MDGEGVRGEGGGNHQAGSVALTHVISLWQGDSGVKGSDGQPGQGEQTGSPATQIQKGEKG
EKGDRGEKGLRGFPGSPGHSMIGMKGAKGEMGEPGKRGKPGKDGEPGLPGHNGQVGYPGQ
PGTPGQPGIKGDRGAQGLDGPPGIIVDKYGIAIYGTPGEPGSPGPQGEKGERGPVGPPGL
IGIQGPPGLPLQGEKGQPGYPGEWGLKGDKGEPGFSKPGLPGTVGPRGLPGPPGQPGPRV
SKEDCISIPGPKGPVGPPGYRGEMGMKGARGDTCYHCNATVLIGPPGPQGPPGLPGDQGF
PGSKGERGPPGRIGFQGQPGPAGVPGSTGIPGAKGDPGDILALPGLKGDRGERGFPGNPG
FPGADGIPGKDGDPGLPGFKGEPATIGFKGEPGLPGPPGPQGLPGDQGQPGTPGIGPPGH
PGGKGIPGFPGQPGLPGTKGQKGESGKSIGLPGPPGFPGSRGEKGQPGSRGDPGFPGIPG
LQGAIGPKGDPGLPGIGFPGPTGPKGVDGLPGEQGSPGLTGRPGVDGQPGPPGLPGEKGI
PGVGLPGPPGFPGNPGLDGVPGLKGDAGFPGIPGRPGQPGPPGFSGIKGNTGLRGSQGPP
GPPGPLGIGAPGIPGKPGPQGPPGSNGYTGPPGPKGDPGFPGLDIPGPQGEQGLRGPKGL
PGLPGKPGEIGRPGRDGPPGLQGPKGEMGMMGAPGSPGFPGDPGIVGLPGAKGDPGLPGF
PGAPGISGAKGTKGENGVQGRPGELNKGEMEKMKGQKGDIGEPGRDGSPGFKGYQGIPGD
PGQAGKDGDPGLPGQPGPAGDPGFPGKPGSTGVPGEKGHIGEMGLPGASGPPGQPGSPGQ
RGLPGFAGRAGQKGVKGDSGPPGYGLPGEQGQKGDPGLPGFPGEPGPIGNPGFPGLTGAL
GPTGPKGSPGVPGIPGNPGPSGTKGDVGHMGEPGFAGSPGLPGPTGTPGPPGSPGDKGLR
GHDGIPGVIGEKGNPGLPGRDMPGQPGHPGPKGVKGDIGLPGFPGLPGVPGRKGEKGYPG
SQGLPGNQGLPGPPNVALEGPKGEKGAPGTPGQPGDPGLQGLPGTTGLTGSKGDKGELGP
PGFQGFPGPKGETGFQGPPGIAGHPGATGQKGDPGRHGVPGFEGSKGSSGPPGLPGIQGD
RGSPGQQGNPGPPGPQGPLQIVKGLPGLPGPAGWKGEKGSPGLLGSKGDTGFPGPPGEPG
DVGPPGFEGRPGQKGESGRNGPTGPKGNPGPRGPEGTPGPRGHPGPPSIAHGFLVTRHSQ
TTHIPTCPHGTSKIYDGFSLLYVQGNERAHGQDLGTAGSCLRRFSTMPFLFCNINNVCNF
ASRNDYSYWLTTPEPMPMSMAPVTGQTIKSFISRCSVCEASAMVIAVHSQTIQIPLCPNG
WYSLWIGYSFMMHTSSGAEGSGQALSSPGSCLESFRTAPFIECHGRGTCNYYANSYSFWL
ATVETTEMFRKPESETLKAGELRTRISRCQVCMKKT
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgagggggtgaggggtgagggaggtggtaatcaccaggcaggctcagtggcc
ctaacacatgtaatttctctttggcagggtgactctggggttaaaggctctgatggacag
cctggccagggagagcaaactgggagcccggcaacacaaatccagaaaggagagaagggt
gaaaaaggagatcgtggggaaaagggactcagaggttttcctgggagcccaggacactcg
atgatcgggatgaagggtgccaaaggagagatgggtgagccgggcaaacggggcaaaccc
ggcaaggacggagagccaggcctcccaggacataacggacaggtgggctatcctggtcaa
ccaggcacccctggccaacctgggatcaagggtgatagaggcgcccaaggactcgatggc
ccccccggaattattgttgacaaatatgggattgctatttatggcacgccaggagagcca
ggaagcccaggtcctcaaggggagaagggagaacgaggtcctgtagggcccccaggactg
ataggaatacaaggacctccaggtttaccactgcagggagagaaaggtcagcccggatac
ccgggcgagtggggcctgaagggcgataaaggggagccggggttctcgaagccgggcttg
ccgggaactgtgggtcccagggggctccccggcccacctggtcaacctggcccccgagtg
tctaaggaagactgtatcagtatacctgggccaaagggacctgttggacctcccggttac
cgaggggagatggggatgaaaggggccaggggagatacctgctaccactgcaatgccact
gtgttaattggaccaccaggaccccaaggccctcctgggctaccaggtgatcaagggttt
ccagggagcaagggagagcgaggaccaccaggaaggataggattccaaggccagcccggt
cctgccggcgttccagggtcgacgggaatccccggagccaagggtgaccctggtgacatc
ctcgctctgcccggtctgaagggagaccggggggagaggggtttcccgggaaatccgggc
tttcctggtgcagatggaattcccgggaaggacggagaccccggcctgcctggattcaaa
ggagagccagcaacaatcggcttcaaaggagagccgggactgccggggcctccaggacct
caaggactaccaggagaccagggacaaccgggcaccccaggcatcgggcctccgggacac
ccggggggaaagggcatcccgggcttcccagggcagccaggcctgcctgggaccaaaggt
cagaaaggcgaatcgggaaaatccataggtttgccaggaccaccaggatttccgggctca
cgaggagaaaagggccagccagggagcagaggtgatccagggtttccgggtatcccaggt
ctgcagggagccattggacccaaaggggatccaggtctgccagggataggatttccgggc
cccaccgggcctaaaggtgtggatggacttcctggagaacaaggttctcccggcctcact
ggcaggcccggagtggacggtcagcctggcccacctggactcccgggagagaagggcatt
ccaggagtggggcttccgggccctccggggttcccaggcaacccagggttggacggagtt
ccaggacttaaaggggatgcaggtttccctgggatcccgggcagaccggggcagccggga
cctccaggtttctccggcattaaaggtaacacgggtctgcgaggctcccagggtcccccc
ggacctcctggacctctggggatcggagcaccaggcatacctggcaagccaggacctcag
ggaccaccaggctcgaacggatacacgggaccccctggacccaaaggagaccctggtttc
ccaggcttagacatcccaggtccacagggagagcaggggctgaggggaccaaagggtctc
cctggcctgcctggaaagccaggtgagattggacgaccaggaagagatggacctcctggg
cttcaaggtccaaaaggagagatgggaatgatgggtgcccctgggagcccaggttttccc
ggagatccagggattgtgggactgcccggcgccaaaggtgacccagggttaccaggattc
cccggcgctccgggcatcagcggagcgaaggggacaaagggggagaatggcgtgcagggg
cggcccggcgagctgaacaaaggcgagatggagaagatgaagggacagaagggagacatt
ggggaaccagggagggacggctctccgggatttaaggggtaccaaggtattcctggtgat
cccggacaggcagggaaagatggggacccaggattaccgggacagccagggccagcgggt
gatcctggattcccaggaaaaccaggaagcacgggcgtcccgggagagaaaggacacatc
ggggagatgggcttaccaggtgcctccggacctcccggccagccaggctccccaggacaa
cgaggactccctggatttgctgggagggctggtcagaaaggtgtaaagggagactccggc
ccaccggggtacggcctcccgggtgagcagggtcagaagggagatccaggtttgccgggt
tttccgggtgaacccggaccaataggcaatcccggttttccggggttgacaggtgcactg
gggccaacaggtccaaaggggagtccaggagtgccaggaatcccaggtaatccaggacca
tccggcaccaaaggtgacgttggacacatgggtgaaccaggctttgccggaagcccagga
ctaccaggtcccacggggactccaggaccccctgggtctcctggagacaaaggcttacga
ggccatgatggaatacccggtgtcataggggagaaaggcaatccaggtctaccgggaaga
gacatgcctggacaacccggacatcctggcccaaagggtgtgaaaggtgacattggcttg
ccgggcttccctgggttaccgggagttccgggcaggaaaggagagaagggatatccgggc
agccaaggtctcccaggtaaccagggactccctggcccgccgaacgtggctctggagggg
ccgaagggagaaaaaggggccccagggactccaggccaaccaggggaccctggattacaa
gggctcccgggaacgacaggactgactgggtcgaaaggagacaaaggagagttggggcct
cctggattccaaggttttccggggccgaagggagagacggggttccaaggaccacccggg
atcgctgggcaccctggagccacgggacaaaagggagacccagggcgtcacggagttcca
ggctttgaagggtcgaaaggctcatcaggccctcccggattacccggcatacagggcgac
agaggatcaccaggacagcaaggcaatccgggacccccaggacctcagggaccgttacag
attgtgaagggacttcctgggttgcccggaccagcaggatggaaaggagaaaagggatct
cctgggcttttaggaagcaaaggtgacacaggtttcccaggcccaccgggagaacctggt
gatgtaggacctccgggctttgaaggaagacctgggcagaaaggagagagtggacgaaac
ggaccaacaggtccaaaaggaaatccgggacccaggggtccggagggaacaccaggccct
cggggacatccgggcccaccgtctatcgcccacggcttccttgtgacacgccacagtcag
acgacgcatattcccacatgccctcatggaacgtcgaaaatctatgatgggttctccctg
ctctatgtgcagggcaacgagagggcccatggacaggacctgggcacggcgggcagctgc
ctgcgaaggttcagcaccatgcctttcctcttctgcaacatcaacaacgtctgcaacttc
gcttcgagaaacgactactcctactggctgaccacgccggagccaatgccgatgagcatg
gctcctgtcactggtcagaccataaagtcattcatcagcagatgttcggtctgtgaagcc
tcagccatggtgattgctgttcacagccaaacgattcaaatcccgctctgccccaacggc
tggtattccctatggattggatattccttcatgatgcacaccagctccggcgccgagggc
tccggacaggccctgtcatcgcccggttcgtgcctggaatcgttccgcaccgctcccttc
atcgagtgccacggccggggaacctgcaattactacgcaaactcctacagcttctggctg
gcgactgtggagacgacagaaatgttcaggaaaccggaatcagagacgctaaaagcggga
gaactgcggacgcgaatcagccgctgtcaagtctgcatgaagaaaacgtaa
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integrated database retrieval system