Hemitrygon akajei (red stingray): 140716517
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Entry
140716517 CDS
T11019
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04820
Cytoskeleton in muscle cells
Brite
Cytoskeleton proteins [BR:
haka04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
140716517
Intermediate filaments
Intermediate filament-binding proteins
140716517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
140716517
NCBI-ProteinID:
XP_072885417
LinkDB
All DBs
Position
25:complement(35874000..36079205)
Genome browser
AA seq
2447 aa
AA seq
DB search
MSSTTTDLDNMEVQRQYNMNSCRETSESHREEEHSSSKLFESSRIKALADERDAVQKKTF
TKWVNSHLARVLCQITDLYVDLRDGCALTKLLEVLSGEQLPKPTRGRMRIHSLENVDKAL
QFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIETEDNRETRSAKDALL
LWCQMKTAGYPGVNIQNFTSSWRDGLAFNALIHKHRQDLIDFSKLQKSNSTFNLQQAFSV
AEQRLGVAKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALAVEGKRIGKVLDNTLEI
EQIIARYGALATELLEWIERTIGLISNQRFANSLAGVQQQFQVFTSYCTVEKPFKFDEKG
KLEVLLFTIQSKLRANNQRPYVPPEGKLISDVNRAWERLEKAEHEREGALRNELIRQEKL
EQLAHRFDHKAVMRETWLNENQRLISQDNFGYDLPAVEASMKKHEAIEADVSSYKERVQV
ITELARELESEGYYDIKRISAQKDNILRLWGFLQETLTARRSRLELNLSLQKIFQEMVHM
IDWMEEMQVLLCSKDLGKHLLEVEDLLQKHSLLEADISVQEERLKALNTAALGFTKDEGY
QPCDPQVICNRVHHVNSCVEELHRLASLRRAQLEGSRCLWAFLQEMEEAESWIHEKQQVI
SSPHLGKDLSSVTRLLGKHKVLMGELAGRCGLLTQTITKGEQILAEKHFGTGNIQERILE
VRVQWKKLDELAVLRLQHLQEALDFFQLKADTDDLEVWLQDAYRIVSSDDFGHDEYSTQS
LAKKHRGLEDDIEQHRPAVEALRQQAAGLAPEYSELEEVKVRVAEVEGLYIEVKEVAGLR
RQWLQDALAVYRMFSEVNACERWIDEKEQWLNRMEIPERLEDLELVQQRFESLDQEMNSM
LARVVEVNEIVRQLVENGHPSATEVRSCQDHLNSRWGQILRLVKSKKDTTNSLLCIQSYL
LECNEIKSQIREKRKVIESTQYLGNDFGGVIALQRKLSTMEGALAVIEPKLIGLQLEAEG
LATAHPAQALEILVQFEEISEEWEQLKRALQGCEDSLSVAGKLQQFIQDLDGFLSWLAQT
QAAALSEEMPNTLGEAEALLRQHEATKEEMGHREDDYRRILAVQELLVLDEAELPLLSIR
QWLQKLELGWEKLQQVWQQRQEMLLQAHIYHLFLRDVRQVEAFLNSQESKLAQLELPTTV
AAAEAAIKKHRDFLVTLEINLQKINTVVEAGGHLAKGGNIYVDKIRDQMESVITRSQNNY
KLAHEWLVRLSDQWELLRFLQSCHELAEWINEKMLTVRNTSHDDAQKLHKKWLKHQAFMS
ELVLNREWLAKIEKEGQELIKEKPELASVVRKKLEEIHECWTLLESTTQEKARHLFDVNR
AEQLVQSYSDLDRRLSQLEGQLLVVDGGRDIATVNTQLQKLQVLENQMEGWYKEVGELQA
QAATLQQEGSGKEEVIEKQNVVETRIVRLIEPLKQRRRILLASKEVHQITRDMEDEMLWV
EERLPLAKSKDHGINLQTVQLLLKKLQTLQREIQGHQPRIGDVIERAGHIASIQSPEADA
VRLSLDRLQELWNALQEETQQRQQRLLATQQAQQYYFDASEVESWLSEQELHMMTDEKGK
DEQSSLQLLKKHLTLEQTVDDYAENICELSKTCRALLDEGHPESEQISKQQSQIDRLYVS
LKDLAEERKGKLEQRYWLFQLNREVDELEQWIAEREVVAGSPELGQDYEHVTLLLEKFTE
FAHETGMIGQERVNTVNQMVDELIDYGHSEAATIAEWKDGVGEAWADLLELIETRAQMLS
ASQELHKFFSDCKEVAGHIEEKHKLLPDVAVGDSSSTFTLQRMLSSFEHDVQALVVQVRQ
LQEHAAQLRTVYAGENAEAIQVQEQRVMQAWKELLGTCEQRKLQLTTTGDKIRFFGLVRE
LVGWMDSIICQIGTGEKPRDVSSVEVLMNYHQSLRGEIEARHKKLMSCVELGKNLLITKH
HASVEIQEKMDKVLRKQDEMMEKWEKHWEWLQQMLEVHQFAQEAVVAESWLSTQERLVTS
EQLGNSVDEVEQLIKRHEAFRKSAAAWEERFSSLRRLTTLERMENKVPFAVQPQQPATPM
LSRRVLPESRGSPIKQSVAVAGIRPVKQQARYEIVDELEEEHPDRGEYKPAKRAARQEKQ
EPAATRHPQRERLQPQPEQAEVRQERRIERQESLSEPREVEQDAAGDRKTTLADIVEQLQ
EKEAQERDSSLSIGLPNGIEKLPERIPRPDRPRARDRPKPRRRPRPKDPNQPGSETRRSR
SAPSPQNSAAAPVLVTHTAEQEGFLARKHEFEAPNKKSSSRSWANVYCVISKGDLGFYKD
AKSQKAGTTYNGEALVTLSEASCEIANNYKKKKFVFKIRITDGNEYLFQAKDEEEMNSWI
KAFSTAITEHAEIAQQSGQIPPTTSSTDEGNTKRESDRRFSLFGKKK
NT seq
7344 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccacaaccacagacctggacaacatggaggtccaacgacagtacaacatgaac
agttgcagggaaacctccgagagccaccgggaagaggagcacagctcctccaagcttttc
gaatcctcgaggataaaagccctggctgacgagcgtgacgccgtccagaagaaaaccttc
accaagtgggtgaactcccacctggcacgagtgctgtgccaaatcacggacctttacgtc
gacctccgcgatggctgtgcgctgaccaaattgctggaggttctgtcaggggagcagctg
cccaagccgacccggggccggatgcggattcactccctggagaacgtggacaaggccctc
cagttcctgaaggagcaacgggtccacctggagaacgtcggctcccatgacatcgtggat
gggaaccaccgcctcacactcggcctcatctggaccatcatcctccggtttcagatacag
gtgatcaaaattgaaacggaagacaatcgtgagacacggtcggccaaagatgctctgctg
ctgtggtgtcagatgaagacggcaggatatcctggcgtgaacatccagaacttcaccagc
agctggagagacggactagcgtttaatgcgcttatccacaagcacaggcaagatcttatt
gacttcagcaagctgcagaagtccaactcgaccttcaacctccagcaggcattcagtgtg
gctgagcagagactgggagttgccaagctgctcgaccctgaagatgtgaacactgaaaac
ccagatgagaagtccatcattacctacgtggtgtcctattaccattacttctccaagatg
aaggcgctagccgtagagggcaagagaattggcaaggtgctggacaacacattggagatt
gagcagatcatcgcgaggtacggggcactggcaaccgagctgctggagtggatcgagcga
accatcggcctcatcagcaaccaacgctttgcaaactctttggccggagtccagcagcag
ttccaagtgttcaccagctactgcaccgtggagaaaccattcaagtttgatgagaagggg
aagctcgaagtcctgctgttcaccatccagagcaaacttcgggcaaacaaccagaggccg
tacgtcccacctgagggcaagctgatctctgatgtcaacagggcctgggagaggttggag
aaggcggagcacgagcgagagggggcgttacggaacgagctcatccggcaggagaagttg
gagcagttggcgcatcggttcgatcacaaggccgtgatgcgcgagacctggttaaacgag
aaccagcgccttatctcacaggataacttcggctatgatctccctgccgtggaggcgtcc
atgaagaagcacgaagccatcgaggcggacgtgtcctcctacaaggagcgggtgcaggtg
atcacggagctggctcgggagctggagtccgagggctactacgacatcaagcgcatctcc
gctcagaaggacaacatcttgcgtttgtggggctttctccaggagacgctgacggcccgc
cgatcccgcctcgagctcaacctgtccctgcagaagatcttccaggagatggtccacatg
attgactggatggaggagatgcaggttctgttatgttcgaaagacctggggaagcacttg
ctggaagtggaagatctgctgcagaagcacagcctcctggaggcggatatctcggtgcag
gaggagcggctgaaggccttgaatacggcggccctggggttcacaaaggatgagggttac
cagccctgcgacccgcaggtgatctgcaaccgcgtccaccacgtgaacagctgcgtggag
gagctgcaccggctggcgtccctgcgccgcgcccagctggagggctcgcggtgcctgtgg
gccttcctgcaggagatggaggaggcggagagctggatccacgagaagcagcaggtcatc
tcctcgccgcacctgggcaaggacctcagcagcgtcacccggctgctgggcaagcacaag
gtcctgatgggggagctggccggccggtgcggcctcctcacccagaccatcaccaagggg
gagcagatcctggcagagaagcacttcggcacggggaacatccaggagaggatcctggag
gtccgggttcagtggaagaagctcgacgagttggcggttctccgactccagcacctccag
gaggccctggacttcttccagctgaaggcagacacggacgacctggaggtctggctgcag
gacgcgtaccgcatcgtgtccagcgacgacttcggccacgacgagtactccacgcagtcg
ctggcgaagaagcaccggggcttggaggacgacatcgagcagcaccggccggcggtggaa
gccctccggcagcaggcggccggcctggcgcccgagtactcggagctggaggaggtgaag
gtccgcgtggccgaggtggagggcctgtacatcgaggtgaaggaggtggcgggactgcgg
cggcagtggctgcaggacgcgctggccgtgtaccgcatgttcagcgaggtcaacgcctgc
gagcgctggatcgacgagaaggagcagtggctgaatcggatggagatccccgagaggctg
gaggatctggagctggtgcagcagagattcgagagtctggaccaggagatgaacagcatg
ttggcccgagttgtggaggtaaacgaaatcgtgcggcagctggtggagaacgggcatccg
agtgccactgaggtcaggagttgccaggatcatctcaacagcaggtggggccagatcttg
cggctggtcaaaagcaaaaaggacaccacgaactctctgctgtgcatccagagctactta
ctggagtgcaacgagatcaagagccagatccgagagaagaggaaggtcattgagtccacc
cagtacctgggcaatgactttggcggggtgattgctctgcagagaaagctctccaccatg
gagggggccctggccgtgatcgagcccaagctgatcggcctgcagctggaggcggagggc
ctggccacggctcatccggcccaggccctggagatccttgtccagtttgaggagatcagc
gaggagtgggagcagctgaagcgggcgctgcagggctgcgaggattccctgagcgttgcc
ggcaaactgcagcagttcatccaggacctggacggcttcctctcctggctggcccagacg
caggccgccgccctctccgaggagatgcccaacacgctgggggaggccgaggccctcctg
cggcagcacgaggccaccaaggaggagatgggccatcgggaggacgactaccggaggatt
ctggccgtccaggagctgctggtgctggacgaggccgagctgccgctcctctccatccgg
cagtggctgcagaagctggagctgggctgggagaagctgcagcaggtgtggcagcagcgg
caggagatgctgcttcaggctcacatctaccacctcttcctgcgcgacgtccggcaggtc
gaggcctttctcaacagccaggagtccaaactggctcaactggaactaccgacaacggtg
gcagcagcagaggcagcgatcaagaagcacagggacttcctggtgaccctggaaataaac
ttgcagaagatcaacacggtggtcgaggctggagggcacctggcgaaaggtggcaacatc
tacgtggacaagatcagagatcagatggaatccgtcatcaccaggagccaaaacaactac
aagcttgcccatgagtggttggtgcggctaagcgaccagtgggagcttctgcggttcctc
cagagctgtcacgagttggcagagtggattaatgagaagatgctgacagtccggaacacg
tcacacgatgatgctcagaaactgcacaaaaaatggctgaagcaccaggcgtttatgtca
gagctggtattgaaccgggaatggctggctaaaatcgagaaggaggggcaagagctgatc
aaagagaagcccgagttggcttcagtggtgaggaagaagctggaagagattcacgaatgc
tggacccttctggaaagcacgactcaggagaaggcgcggcacctgttcgacgtgaatagg
gcggagcagctggtgcagagttacagtgacttggacaggaggctgtcccaactcgaaggg
caactgctggtggtggacggtgggcgggacattgctacggtcaacactcagctccagaag
ctgcaggtgctggagaaccagatggagggctggtacaaggaggtgggagagttgcaagcc
caggctgcaacactgcaacaggaaggttctggaaaagaagaggtcattgagaagcaaaat
gtcgtggaaacaagaattgtgcgcctgattgagccactgaagcaaaggcggaggattctt
ttggcatccaaagaggtccaccagattacgcgggacatggaagatgagatgctctgggtt
gaggaacgtttgccattggccaagtccaaggaccacggcatcaatctacaaacagtacag
cttcttctgaagaaacttcagactctccagcgggagatccaagggcaccagcctcggatc
ggtgatgtgatagagcgggctggacacattgcttcgattcagagcccggaggccgatgct
gtgcgcctgagcctggaccggctgcaggagctgtggaacgcgttgcaggaagagacgcag
cagcggcagcagaggttgctcgcgacgcagcaagcccagcagtattacttcgatgccagc
gaggtggagtcctggctgagcgagcaggagctgcacatgatgacagatgagaaagggaag
gatgagcagagctctctccagctgttgaagaagcacctgaccctggagcagactgtcgac
gattacgcggagaatatttgcgagctctcgaagacatgtagagcgttactggatgaagga
cacccagagagcgagcagatcagcaagcagcaatcgcagatcgaccgtctgtacgtgagt
ctgaaggacctggctgaggagcggaagggcaagttggagcagcgctactggctcttccag
ctgaaccgcgaggtcgacgagctcgagcagtggatcgccgagcgagaggtggtcgccgga
tctccagagcttggccaagattatgagcatgtcactttactactggagaagttcacagag
tttgcccacgagactgggatgattgggcaggagcgggtgaacacggtgaatcagatggtg
gacgagctgatcgattacggccacagcgaagccgccaccatcgcggagtggaaggacggt
gtcggcgaggcctgggcggacctgctggagctgatagagacgcgggctcagatgctgtcg
gcctcccaggagctccacaagttcttcagcgactgcaaggaggttgctggccacattgag
gagaagcacaagctgcttccggacgtcgctgtcggcgattccagcagcacctttactcta
caacgaatgctgagttcctttgagcatgacgtacaagccctggttgtgcaggtgaggcag
ttacaggagcacgctgcccagctgcgcacggtgtatgccggcgagaatgccgaggccatc
caggtgcaggagcagagagtgatgcaggcttggaaggagctgctgggcacctgcgagcag
cggaagctgcagctcaccaccaccggcgacaagattcgcttcttcggcctggtccgcgag
ctggtgggctggatggacagcattatctgtcagatcggcacaggcgagaagccccgggac
gtttcttctgtggaggtgctgatgaactatcaccagagtctccggggggagattgaagcc
aggcacaagaaactcatgtcttgcgttgagctgggcaaaaacttgctcatcacaaagcat
cacgcttctgtcgagattcaggagaagatggacaaggtgctgaggaagcaggatgagatg
atggagaagtgggaaaaacactgggaatggttacaacagatgctggaagtccatcagttc
gcccaggaagcggtggtggccgagtcgtggctgagcacgcaagagcggctggtcaccagc
gagcagctgggcaacagcgtggacgaggtggaacagctgatcaaacggcacgaagccttc
cgcaagtcggcagcagcctgggaggagaggttcagctcgctgaggagactgaccacgctg
gaacgcatggagaataaggttccctttgctgtccagcctcagcagcctgccacgcctatg
ctgagccgcagagtgctgccagagtccagaggctccccaattaagcagtcggtggccgtc
gcgggaatccgacccgtcaagcagcaggcgaggtacgaaattgtcgacgaactcgaggag
gagcaccccgacagaggggagtacaagccggccaaaagagccgccaggcaggagaagcag
gagccggccgccacgaggcacccgcagcgcgagcggctgcagccgcagccggagcaggcc
gaggtgaggcaggagcgcaggatcgaacggcaggagtcgctgagtgagccgcgggaggtg
gagcaggacgctgctggggacaggaaaacaaccctcgctgatattgtcgagcagttacag
gagaaggaagcccaggagcgcgattcctcattgtccatcgggctgccaaatgggatcgag
aagctcccagagagaatcccacggccggacagaccacgggccagagacagacccaagccc
aggaggagaccgcggcccaaagatcccaaccagcccggttcggaaactcgccgatccagg
tccgccccgtctccccagaatagtgcagcggccccagtgctggtgacgcatacggcggag
caagaggggttccttgcacgcaagcatgaattcgaagctccaaacaaaaaatcatccagc
aggtcctgggctaacgtctactgcgtcataagtaaaggagatctggggttttataaagat
gccaagagtcaaaaagcaggaacaacctataacggggaagcacttgtcacacttagcgag
gccagttgtgaaatcgccaacaattacaaaaaaaagaaatttgtgtttaaaatacggata
accgacggcaatgaatacctgttccaggcaaaggatgaggaagagatgaacagttggatc
aaggctttttccaccgccatcacagaacatgcagaaattgcgcagcaaagcggccagatc
cctcctactacctcctccaccgatgaagggaatacgaaacgggaaagtgatcgaagattc
agcctctttgggaagaagaaatga
DBGET
integrated database retrieval system
