Hemitrygon akajei (red stingray): 140716532
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Entry
140716532 CDS
T11019
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haka03000
]
140716532 (npas1)
Transcription factors [BR:
haka03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
140716532 (npas1)
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
140716532
NCBI-ProteinID:
XP_072885438
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Position
25:complement(38095710..38720792)
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AA seq
810 aa
AA seq
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MLKMATQYNNELKCVSVEWDFLQGLLVKNQPVPCLQALRKEKSRNAARFRRGKENFEFYE
LAKMLPLPGAITSQLDKASIIRLTISYLRMRDFANLGDPPWNLRIEGPPPNISVKAIGTQ
QRRSPTSLAIELFEQHVGGHILQSLDGFIFALNQEGKFLYISETVSIYLGLSQVELTGSS
IFDYIHPGDHVEVAEQLGLKVPSSRGHSSQAPAEDGASSTSSSSLAETPEPDSASPSLLS
EDAALERTFFVRMKSTLTKRGVHIKSSGYKVIHVTGRLRPRISLPHARAVPTKFMGMVAL
AHTLPPSTINEVRIECHMFVSRVSLDLQIIYCENRISDYMDLSTADVVGKNCYHFIHAED
VEGIRHSHLDLLNKGQVVTKYYRWMQKNGGYMWVQSSATISINVKNGNEKNIIWVNHVLS
KPELRDTPMDISQLPLSSIKASKQLVLSDSESDSREHIGSHDPKATGKASNLEAGVRARS
EAWKRSDSPSEEEMTSAKDDSDSSLSDSEGPSGGRRSLVLPRVKRMKVEGQAEAGPGREL
RGSGPSDGGTGASSEEEESGGLAARHLYPKRRKRPRDGSGPRAKAPGVADRDSTLKVKTE
ATPAIGYEGRRPAWDYPSEREAAYHQRAAKAPPATSDHFGADPPLSPPGAADNPGGRKTP
FGPSPRASDARSPAPPSADDKAEVLALTQAPPPPPSSLYAASTIRYAPADVALAVPGNLL
PAAAHALNFVELNGPAFGAEQKAQVEMIYHHVQRLNMAANPFGSPAAAAGLTQVPAGSVF
TTAEALFSTLPFPMNAGTIHPPQALERKED
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagatggcaacccaatacaacaatgaactgaaatgtgttagcgtagagtgggac
ttccttcaaggactgctcgtaaagaaccagcctgtcccttgcctgcaggccctacggaag
gagaagtctcgcaatgctgcccgattccgacgaggcaaggagaacttcgagttctacgag
ctggcgaagatgctcccgttaccgggtgccatcacgagccagctcgacaaggcttccatc
atccggctgaccatcagctacctccgcatgagggacttcgccaacctgggggaccctcca
tggaacctccggattgaggggcccccgccgaacatctctgtaaaagcaataggaactcag
caacgaagaagccccacttccctggctatcgaactgtttgaacagcacgtgggtggacac
atcctacagtccctggatggttttatttttgcactaaaccaagaaggaaaatttttatac
atctctgaaaccgtctccatctacctgggactgtcacaggtggaactaacaggcagcagc
atcttcgactacattcaccctggcgatcacgttgaggtggcggagcagctgggtctgaaa
gtgccgagcagccgcggtcatagctcccaggcccccgccgaggacggggcaagttcgacg
tcttcctcctcactggccgagacccccgagccagactccgccagccccagcctcctgtcc
gaggacgcagcactcgaacgaacgttcttcgtccgcatgaagtcgacgctgaccaagcga
ggggtccacatcaagtcttcaggatacaaggtcattcacgtcacaggtcgcctgaggccg
cggatatctctgccccacgcccgcgctgtccccaccaagttcatggggatggtggccctg
gcccacacgctccctccttccaccatcaacgaggtgcgcattgagtgccacatgtttgtc
tccagggtcagcctcgaccttcagatcatctactgtgagaacaggatctcggactacatg
gacttgtccacagcggacgtggtggggaagaactgctatcacttcattcacgccgaggat
gtggaagggatccgacatagccacctggacttgttgaacaagggtcaggtggtcacgaag
tattaccgttggatgcagaagaacggagggtacatgtgggtgcagtcgagcgccaccatc
tcgatcaacgtgaagaatgggaacgagaagaacatcatctgggtgaaccatgtgctgagc
aaaccggagcttcgagacactcccatggacatctcacagctcccgctctcgtccatcaaa
gcttccaagcagctggtgttgtcagattcggagtccgactctcgggagcacatagggagc
cacgacccgaaagccacggggaaggcgagcaacttggaggcgggagtcagggcgcgctcg
gaggcctggaagcgatccgacagcccgtccgaggaggagatgacctcggccaaggacgac
agcgactccagcctgtcggacagcgaggggccgagcggcggcaggaggagcctggtcctg
ccgcgagtcaagcggatgaaggtggagggccaggccgaggcagggccgggccgagagctg
cggggctcgggacccagtgacggaggcacgggggccagctcggaggaggaggagagcggc
ggcttggccgcccggcacctgtacccgaagcggaggaagaggccgagggatggctcgggg
cctcgggccaaggcgccgggggtggccgatcgcgactctaccctcaaggtcaagactgag
gccacaccggccatcggctacgagggccgccgcccggcctgggactacccatccgagcgg
gaggcggcctaccaccagcgggcggccaaggccccgcccgccacctccgaccatttcggc
gcagatccccccctcagcccgcccggcgctgccgacaaccccggcggcaggaagacaccc
ttcggcccgtctccccgggcctccgacgcccggtcgccggccccgccgtccgccgacgac
aaggccgaggttctggccctgacccaggccccgccgccgccgccctccagcctgtacgca
gccagcaccatccgctacgcgccggccgacgtggcgctggccgtgcctggcaacctgctg
cccgccgccgcccacgccctcaacttcgtggagctgaacggcccggccttcggcgccgag
cagaaggcgcaggtggagatgatctaccaccacgtccagcgcctcaacatggcggccaac
cccttcgggtcgccggccgccgctgccggcctcacccaggtaccggctggcagcgtcttc
accacggccgaggccctcttctccaccctgcccttccccatgaacgccggcaccatccac
cccccgcaggccctggagcgcaaggaagactga
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