Hemitrygon akajei (red stingray): 140716540
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Entry
140716540 CDS
T11019
Symbol
snrpd2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140716540 (snrpd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haka03041
]
140716540 (snrpd2)
03032 DNA replication proteins [BR:
haka03032
]
140716540 (snrpd2)
Spliceosome [BR:
haka03041
]
Complex A
U1 snRNP components
Sm proteins
140716540 (snrpd2)
U2 snRNP components
140716540 (snrpd2)
Complex B
U1 snRNP components
140716540 (snrpd2)
U4/U6.U5 tri-snRNP components
140716540 (snrpd2)
Complex C
U2 snRNP components
140716540 (snrpd2)
DNA replication proteins [BR:
haka03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
140716540 (snrpd2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
GIT1_C
Motif
Other DBs
NCBI-GeneID:
140716540
NCBI-ProteinID:
XP_072885455
LinkDB
All DBs
Position
25:complement(39879359..39899485)
Genome browser
AA seq
118 aa
AA seq
DB search
MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLITGK
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttaaacaagccaaagagcgagatgactcccgaggagttgcagaagagagag
gaagaggagtttaatacggggcccctctctgttctgacacagtcggtcaaaaataacaca
caggtccttattaactgccggaacaacaagaagctgctgggcagagtcaaggcctttgac
aggcattgcaacatggtgttagaaaacgtgaaggagatgtggaccgaggtacccaagagc
ggaaaaggcaagaagaagtcaaaacccgtcaacaaggaccgatacatctctaagatgttc
cttcgaggggactctgtgattgtcgtacttagaaacccactgatcacaggcaaatga
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