Hemitrygon akajei (red stingray): 140716840
Help
Entry
140716840 CDS
T11019
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04270
Vascular smooth muscle contraction
haka04625
C-type lectin receptor signaling pathway
haka04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
140716840
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
140716840
09153 Circulatory system
04270 Vascular smooth muscle contraction
140716840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
haka04131
]
140716840
Membrane trafficking [BR:
haka04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
140716840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
PH_13
STI1-HOP_DP
Pept_S41_N_bact
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
140716840
NCBI-ProteinID:
XP_072885899
LinkDB
All DBs
Position
26:complement(34039891..34184591)
Genome browser
AA seq
1572 aa
AA seq
DB search
MGESDWPSQTVQAAIRRLSNLQGSILNKDLSPDKKHDKKNSEKSPLYEFDPTESSSKQKK
PRFNCDEHKRGSYGLVQRCVIIQRDENGFGLTVSGDNPVFVQSVKEDGAAVRAGVQQGDR
IIKVNGTLVTHSNHVEVVRLIKSGSYVALTVLGRPPGSPQIPLTSADGDAGGIFFPGQQG
QMSPNTTFSLHSSSSSCPERITSPMPVAEDNIVHNQKVEILRNMLGTELRQLEQLREKYT
RNPSPQVLRDQQEVEKHIQQLQEQLSKATGSLPDGSSSIRHSETLAIVERSTEDTGDWEH
DLPPQNENTGSDRSRISFGRAESMISSPSPPCDGLFHRDSLNSSPKIFPKDAGSFCESME
VDESQDWDSLSSGVSLPRVPVPIIGAEDDDFDTEAEQIDVQCSCFQTIDLVKSRPAHLVA
FLHHVVSQFEAAPLLCYLYADLYNHTNSKDHRRMFLEFCHLFLEKGSNLRVQVPEWISVE
LERRKGDMSEEVQRSCVQGMQDSVLPDVQTHLEDFRQKRNMGMTIGENELAKLDAERIRD
RVAAEQKERVCAEHLLQKIEEVLATLSPSEEEKSNSVADVFFIYMKHLGVKVKEMRNLDR
ERRLKVAFFPKKKPSIKKEKETVKDDEKKKRFQSILDPIRRTSKQDRSAIEKAKLLHQRQ
TTTYIRSASHSDHSERSKSIQFFNEGSDTSHQPMVIGSPGPAVANTVHDGISECDTDSAF
TTPTSLKMLTDNSLTGDSSTSSPKSTFELPSILDQVMEEDRESEKSLETATPPCTPKPGR
RADGHGYGVWTEASSQTHPLSQTEEDQMHLSDVEQDPANWQQLVSRDVLSGLKPHEIKRQ
EVINELFHTERAHIRMLKVLDVIFYQKMLRDGSLPPADVRNIFSNLEEILQLHVSLNEQM
RKVWKRNENFVVDQIGEDLLNWFSCSEEEKFKRAAATFCSNQPFALELIKSKQKKDSRFQ
AIIQEAQSNPQCRRLQLKDIIPAEMQRLTKYPLLLENIAKNTDPEQHEEKKKVKQAAECC
RQILNFVNQAVKEAENKQRLEDYQRRLDLSSLKQSDYPLIEEFRNLDLTKRIMIHEGPLT
WRVNKDKTIDLYTLLLEDILVLSQKQDERLVLKCHSKNLAANADTKHIFSPIIKLSAVLV
REVATDNKAFFVISTSADGAQIYELVAQTVSERKTWQYLITQTSGSIKAPIHHASEPPTE
SEQEDEENISTIQQGGSRKVQGRMSSSSDSTQGKEVDDPLAVNISASSKQKHSAIISAQE
TEEQPRYIQDYNSLRRPTAGRPPYRSTELHYSSRAHSSVSSFPYSRAEAALINLHSLKQI
LMVQLLGSDDDASDGTSVQHLADEDSLSLKQETDGPPDTMMCLQGEMPNKALQHQVEMAN
GTLEELETDTRVSERTKFTRQLTLEAGHSERVTTEGHGPDLVADDVGERFYDAPEDHSDE
RRSQGNSSSLNKEEEARSQACASGNFLTLDDFPQTEGSSTDEIDMSALPPDYSMVCQQNT
ETRESNSVTAPCTAEGSEAGIRQLLPSHVRNQILQFIHNIESDLKYLKEVELEYYSQHDL
ESTASHEPTGDS
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaagtgattggccatcccagactgtccaggcagcaattagaaggcttagcaac
ttgcaaggaagcatactgaacaaggacctgtcgcctgacaaaaagcatgacaaaaagaac
tcggaaaaatctcctctatacgagtttgacccaacagagagctcgtccaaacaaaagaag
cccagattcaattgtgatgagcataaacgtgggtcctatggtctagttcagcgctgtgtc
ataatccagagagatgaaaatgggtttggcctgacagtcagtggggataatcctgtgttt
gtccagtccgtcaaagaggatggagcagccgtacgtgccggtgtgcagcagggtgataga
atcattaaggttaatggaacgttggtcacacattcaaaccatgtggaggtggttcgatta
attaaatctgggtcgtatgtggctctcacagtcctaggccgcccccctggctctccccag
attccactgacttctgctgatggagatgctgggggtatctttttccctggacagcaaggt
cagatgtccccaaatacaactttctctctccactcttcaagcagcagctgccccgagagg
atcacaagtcccatgcctgtggcggaagacaatattgtgcataaccagaaggttgagatt
ctgaggaacatgttaggcactgagttacgacagctcgagcaacttagggagaagtacacg
aggaacccatcaccacaggtgcttcgagatcagcaggaggtggagaaacacattcagcaa
cttcaggaacaacttagcaaagcgacaggctccttaccggatggctcaagttcgattcga
cactcggaaacattagctattgttgaaagatcgactgaagacacaggcgactgggagcat
gatcttccaccgcagaatgagaatacaggatccgatagaagccgcatttcatttggccgt
gcagagtctatgataagcagcccgtctcccccatgtgatggtctatttcaccgagactct
ctgaacagcagccccaagatcttcccaaaagatgctggcagtttttgtgagagtatggaa
gtcgatgagagccaggactgggattcactgtcctcaggggtcagtctcccacgagttcca
gtaccaataattggcgctgaagacgatgattttgatacagaggctgagcaaattgacgtt
cagtgcagctgtttccaaaccattgaccttgtgaaatccaggccggcacatttggttgca
tttttacatcatgtcgtgtcacagtttgaggcagctccattgctctgttacctctatgct
gatctctacaatcacacaaattctaaggatcatcgacggatgtttctagagttttgccat
cttttcttggagaagggatcgaatctcagagttcaggttccagaatggatcagtgtagaa
ctagagcgtagaaaaggagatatgtctgaggaagtgcaacgtagctgtgtgcaggggatg
caggacagtgtcctgcctgatgtgcagacacatctggaagatttcaggcaaaagcggaat
atgggaatgacaatcggagagaatgaattggcaaagttggatgcagagcgaatccgggac
cgtgttgcagcggaacagaaggagcgggtgtgtgcagagcacttgttacagaagattgaa
gaggtccttgcgacattatccccttctgaggaagagaaaagtaattcggttgcagatgtg
tttttcatctatatgaagcaccttggagtgaaagtgaaggaaatgaggaacctggacaga
gaacgcagattaaaagtcgcattctttccaaagaagaagccaagtataaagaaagagaag
gaaacagtgaaagatgatgagaaaaagaaacgtttccagagcattctggacccgatccgt
cgcacgagcaaacaggatcgcagtgcgattgaaaaggctaagttactccaccagaggcaa
acgacaacatacatccgatcagcttctcactctgaccacagcgagagatcaaaatctatc
cagtttttcaacgagggaagtgacacaagccatcagcccatggtgataggctcaccaggc
ccggctgtggccaacactgtccatgatgggatctcagagtgcgacacagattctgctttt
acaacacctacttcattgaagatgttgacagacaattcattaacaggggattccagcact
tcttcaccaaagtcgacctttgagcttccatccatactggatcaggtgatggaggaggac
agggaatctgagaaaagcctcgagactgccacacccccatgtactccaaaaccaggtcga
cgagcggatgggcacgggtatggagtgtggaccgaggccagttctcagacacaccccctg
agtcagacagaggaagatcaaatgcacttgtcagatgtggagcaggacccggccaattgg
cagcagctggttagtcgggatgtcctgtctggcctgaagccacacgagatcaagaggcag
gaagttattaacgaacttttccatacggagcgggctcacattcgaatgctgaaggttcta
gatgtaatcttttaccagaagatgttgcgagatggtagcttacctccagctgatgtgaga
aacatattctccaacctcgaggaaatcctgcagcttcatgtttcattaaatgaacagatg
agaaaagtctggaaaagaaatgaaaactttgtggttgatcagatcggagaggacttgcta
aactggttcagctgctctgaagaggagaagtttaaacgagctgcagctactttctgcagc
aatcagccctttgctttggaactgatcaaatcaaagcagaagaaagattcaagatttcag
gcaatcattcaggaggcacagagtaacccgcagtgccggaggctgcaacttaaggacatc
atcccagctgagatgcaacgtctgaccaaatacccattactcctggagaacattgctaaa
aatacagatccagaacagcacgaagaaaagaagaaggtaaaacaggcagcggaatgctgc
cgtcagatcctgaactttgtgaatcaggctgtgaaggaggctgaaaataaacagcggttg
gaagattaccagcgacgcttggatctgtctagcctgaagcagtcagattatccgctgatt
gaggagttccggaatctggacctaacaaagcggatcatgattcatgaagggcctctgact
tggcgggtgaataaagataagacaattgatctctacacacttctactggaggacatattg
gttctatcccagaaacaagatgagcgtttggtgttgaagtgtcatagtaaaaatctcgct
gccaatgctgataccaaacacatcttcagccccatcatcaaactctctgctgtgcttgtg
cgggaagtcgcaacagataacaaagctttcttcgtcatctcaacgtcagctgatggtgca
cagatctatgagctggtggcccagacagtgtctgaacggaaaacgtggcagtatttaatc
acacagacttcaggatcgataaaggcaccaatccaccatgcctcagaaccacctactgag
agtgagcaagaggatgaggaaaatataagcacaatccagcaaggtggatcaaggaaagtc
caaggaaggatgtcgagcagcagtgattcaacacaaggtaaagaggttgatgacccactc
gctgtgaatatctcggcatccagcaagcagaaacatagtgcaatcatctctgcgcaggag
acagaggagcaacccaggtacatacaagactataacagcctccgaagaccgactgcaggg
cggcccccctacagaagcactgagctgcactactcaagccgggctcacagttcagtatca
tcattcccttattcaagagcagaggctgcactaataaaccttcattccttgaagcagata
ctgatggttcagctgctgggttcagatgacgatgccagcgatgggacttctgttcagcac
cttgcagatgaggacagtttatcactaaagcaggagacagatgggccacctgacacaatg
atgtgccttcaaggtgagatgcccaacaaagcactgcagcatcaggtggagatggccaat
gggacactggaagaattggagactgataccagagttagtgaaaggactaaatttacccgt
cagttgacactggaagcaggtcacagtgaacgtgtcacaactgaaggtcacggaccagac
ttggtagctgatgatgttggagagaggttctatgatgctccagaagatcattcagacgag
cgtcgatcacaagggaacagctcaagtctgaacaaagaagaggaggcaagatcacaagcc
tgcgcatcagggaatttcctaaccctagatgactttccacagactgaagggagctccact
gatgaaatagatatgtctgcacttccacctgattattctatggtttgccaacaaaacact
gagacaagggagagcaacagtgtaactgctccttgtactgctgaagggtcagaggcagga
atcagacagctgcttccttcacacgtgcgcaaccaaatcctccaattcatacataatatt
gagtctgatctgaagtatttaaaggaggtggagctggaatactacagtcagcatgacctg
gaatccacagcttcacatgagccaacaggagacagttaa
DBGET
integrated database retrieval system
