Hemitrygon akajei (red stingray): 140716932
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Entry
140716932 CDS
T11019
Symbol
dscaml1
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
haka04515
]
140716932 (dscaml1)
Cell adhesion molecules [BR:
haka04515
]
Immunoglobulin superfamily
Other
140716932 (dscaml1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_6
Interfer-bind
Receptor_2B4
fn3_2
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
140716932
NCBI-ProteinID:
XP_072886169
LinkDB
All DBs
Position
26:43443292..44116799
Genome browser
AA seq
2082 aa
AA seq
DB search
MSRVGCRWGTAVTFTSQSPTTKARDLSSLPTALRHTQREIGAVYGMWLISLILLYSLTRA
HSEDPRTSLYFVNDSLQQVIFSSSVGTVLPCPAAGSPGTILRWYLATKDDIYDVPNIRHV
HLNGTLQLYPFPPSGFNSFIHDNDYFCTAENKAGKIRSPNIRVKAVFREPYTVRVEDQRS
MRGSVAVFKCLIPPSVQEYVSVVSWERDTVSIIPGSRFHITSYGALYISDVQKEDALSTY
RCITRHKYSGETRQSNGARLSVSDPMESAPTVLDSFQSREVKTRKTMELPCIASGYPNPT
IRWLKDNRPLPVDSRWTKRITGLTINTLRVEDSGTYICEVTNTFGSAEVTGIIKVIDPLR
VTVTPKKLKTGIGSTVILSCSVMGSPEYVIRWYRDTELVVPDSYISIRGINNETLLITSA
QKSHSGAYQCFASRKSQTAQDFSIIVLEDGTPRIISSFSEKVVNPGEQFSLMCAAKGAPP
PTLSWTLDDELIIRDSGHRTNQYTMTDGTTVSHMNVTSPQIKDGGVYRCTARNLVGSAEY
QARINVRGSPSIRSMKNITAIAGRDTFINCRVIGYPYYSIKWYKDSILLPDNHRQAVFEN
GTLKLVDVQKGMDEGEYVCSVLVQQQHSISQRVHVAVKVPPLIQPFEFPPASIGQLLYIP
CVVSSGDMPIRITWRKDGQLILSGSGVTIETKEFMSSLQISSVSLKHNGNYTCIASNEAA
TVMRERRLIVRVPPRFVVQPNNQDGIYGKSGVLNCSVDGYPPPKVMWKHAKGSGNPQQYH
PVPLTGRIQILANGSLLIRHVLEEDIGYYLCQASNGVGTDISKSMFLTVKIPAMITSHPN
TTIAIKGQNKELNCTARGERPIIIRWEKEDTVIDPDRMFRYSVATKDNGEEVVSTLKIIP
ADRGDSGFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSL
ILGFDIEYKNKSDSWDLKQSTRNINPTINQANIVDLHPASVYSIRIYSFNKIGRSESSKE
LTVSTEEAAPDGPPMDVILEPVTSQSIRVTWKAPRKELQNGVIRGYQIGYRENGPGSNGQ
YSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPDN
VKAVSISSDVVTIVWSPPPRSTLNGVLKGFRVIYWSVHQDGDWGEMQNITTMDSQVELRG
LEKFTNYSVQVLAFTQAGDGVRSLVIYAQTKEDIPGPPAGIKAVPSSATSVVVSWLPPTK
PNGIIRKYTIFCSSPGSGQPAPSEYEASPETLYYQIPNLKSKQQYLLWVAAVTSAGRGNV
SNKVTGEPAAKAPARIIAFGGTVTTPWMKDVFLPCRAVGDPGPTIKWTKDSEDSAIPVQV
DGHRMIFNNGTLFLRSVRAEDSGYYTCTATNTWGFDTIIVNLLVQVPPDQPRLTVSRTSA
SSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFINPSERSFKLDNLKCGTWYKVKLA
AKNSVGAGRISEIIEAKTHGREPAFNKDTHLFTHINSSHARLNLQGWNNGGCPIRAIIMD
YRPKGTWPWLTLRTNLSNEIFLQDLREATWYELKMRACNSAGCGNESTQFATLDYDGSTI
PPIKSMQGEGDDVKKLFTIACPVILATVAVALLFIIRKKRKEKRLKRLRDAKSLAEMLIS
KNNRSFDTPVKGQPQGPRLHIDIPRVQLLIEDKEGIKQLGEDKATIPVTDSEFNQSVNPQ
SFCTGVSLHHPALVQNTGPLIDMSDIRPGTNPVARKSVKSAHSTRNRYSSQWTLTKCQAS
TPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYE
HAKLEEQLQHAKFEITECFISDSSSDQMTTGTTDNADSMTSMSTPSEAGICRFTASPPQP
QDIDRGKNVAVPIAHRAGDYCNLPLYVKSDAFFRKSDARDPCPVVPPREASIRNVARAYQ
SQGRHLTLDPNSKPPIHPHATTTLPQRTLTVPASTAPTTTTSSNTSATSAAPTGASAPAE
PRLAAHTKISSSRDSLLEMSTAGLGRSQKQGAGAYSKSYTLV
NT seq
6249 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgggtaggctgtcgttggggaaccgccgttaccttcacctcgcagtctccgaca
accaaagcgagggatctgagctctctcccaaccgcactgagacacacacagagggaaata
ggtgctgtttatggcatgtggcttataagtctaatcctgctgtactctctaacccgagca
cacagtgaggatccaaggacgagcctgtacttcgtgaatgactcgttgcagcaggtgatc
ttctccagctcggtgggcacggtgctgccctgcccggctgccggctctccgggcaccatc
ctccgctggtaccttgccacaaaagatgacatctacgatgtgcccaatatccgccacgtc
cacctcaacggcactctgcagctctatcccttcccgccatcagggtttaatagctttatc
cacgacaatgactacttctgcacggctgaaaacaaagccggcaagataaggagcccaaat
atccgtgtcaaagcagttttcagggaaccctacaccgtacgggtggaggatcaaaggtca
atgcgtggaagcgtggctgtcttcaagtgcctcattcctccttcggtgcaggagtatgtt
agcgttgtgtcgtgggaaagagatacagtctcaatcatcccagggagtagattccacatc
acttcgtatggagccttgtacatatctgatgtacaaaaggaggacgcgctgtccacgtac
aggtgtatcaccagacataaatacagcggagaaacgcggcagagcaatggagcccgcctc
tctgtttccgatcctatggaatcagcgcctacagtcttggacagttttcagtccagagaa
gttaaaaccaggaaaactatggagcttccttgcattgcttcaggttacccaaacccaaca
atccgttggctgaaagacaacaggcccttgccagtagatagcagatggaccaaacgcatc
acaggcctgacgatcaacaccttgcgtgtggaggacagtgggacttatatctgtgaggtg
acaaatacattcggctcggcagaggtcactgggatcattaaagtgatagatccactgaga
gtaactgtgactccaaaaaagctgaaaactgggatcggcagcacagtcatcctctcgtgc
agtgtgatgggctcccctgagtatgtcatcaggtggtaccgggacactgagcttgttgtt
cctgacagttacatttccattcgaggaatcaacaatgaaaccctccttatcacatctgcg
cagaagagtcactcaggggcctaccagtgctttgcctccaggaaatcccagactgcacag
gacttttccataattgtcttggaagatggtacgcctcggattatctcgtccttcagcgag
aaggtggtcaatccgggagagcagttttctctgatgtgtgcggcaaagggtgcccctcct
cccaccctgtcctggacgttagacgatgagttgatcatcagagacagtgggcaccggacc
aaccagtacaccatgacagatggcaccaccgtcagccatatgaacgtcacgagcccacag
atcaaagacggaggggtttatcgctgtaccgcgaggaacctggtcggcagcgccgagtac
caagcgcgaataaacgtaagaggctctccgagtatacgctccatgaaaaacatcacggcc
attgctgggagagataccttcattaactgccgggttattggatatccctactactccatc
aagtggtacaaagactcgatattgcttcctgacaatcacaggcaggccgtatttgagaat
ggtactttgaagctggttgatgtgcagaaagggatggatgaaggggagtacgtgtgcagt
gtgctggtgcagcagcagcattccatcagccagagggtccacgtcgctgttaaagtaccc
ccactgatccagccgtttgagttcccaccagcatcgattggccagctgctctacatcccc
tgcgtggtgtcctcaggtgacatgcccattcgcatcacctggaggaaggatggtcagctc
atactctctggctccggggtcaccatcgaaaccaaagaattcatgagctccctgcagatc
tccagtgtctctctgaaacacaatggcaactacacatgcatcgccagtaacgaggcagca
actgtcatgcgtgagcggcggctcattgtccgagttccccctcgttttgtggtacagccc
aataaccaagatgggatctatgggaaatctggagttcttaactgttcggtggatggatac
cctcctccgaaggtcatgtggaagcatgcaaaaggaagtggaaaccctcagcagtatcac
cctgtcccattgacaggccgaattcagatcctggctaacggttccttgttgattcgtcat
gttttagaagaagatattgggtactacctttgccaagcaagcaatggagttggcaccgac
atcagcaagtcaatgtttcttacagtaaagatcccagctatgattacttcccaccccaac
accaccatcgccatcaagggtcagaacaaggagcttaactgcacagcccgtggagaacgg
cccatcatcattcgctgggagaaggaggacacagtgattgatccagacagaatgttccga
tactcagtggccaccaaggacaatggggaagaggttgtctccaccctgaagatcatacct
gccgatcgaggggattctggcttcttctcttgccatgcaatcaattcctacggagaggat
cgaggactcattcaactcacggttcaagagccacctgatcctcctgagctggagatcaga
gaagtgaaagcccgcagcatgaatctccgctggacacagcgatttgatgggaacagtctt
atccttggctttgacattgaatataagaacaagtcagactcatgggacttaaagcagagt
actcggaatatcaacccaaccataaaccaggccaacattgtggatctgcacccagcatcc
gtctacagtataaggatctactcattcaacaagatcggcagaagtgaatcaagcaaagaa
ttaactgtcagcacagaggaagcagctccggatggcccacccatggatgtcatattagag
cctgtcacatctcagagcatcagagtgacctggaaggcacccaggaaggaactccagaat
ggggtgatccggggctaccagattggctaccgggaaaacggccctggcagcaacgggcag
tacagtatcgtggagatgaaggcaacaggagacagcgaggtatacacactggacaacctg
aagaagtttgcccagtatggcgttgtcgtgcaggcatttaaccgagctggcaccggaccg
agttcttctgaaatcaatgctacaacgcttgaggatgttcccagccaacctccagacaac
gtgaaagctgtgtccatctcatcggatgtcgtcactattgtttggtcaccacctccacgt
agtactttgaatggagtattgaagggtttccgtgtcatttactggtccgtgcaccaagat
ggagactggggagagatgcagaacatcaccacgatggactcacaagtggagctgagaggc
ttggagaagttcaccaattacagtgtccaggtgctggccttcactcaggcaggggatggc
gtgcgcagcctggtgatctacgcacagacaaaagaagacattccaggacctcctgctgga
attaaagctgtcccctcctcggccaccagtgtggtggtgtcctggctccctcctaccaag
ccaaatggaatcatccgcaaatacaccatcttttgttcgagccctggatctgggcagcca
gctcccagtgaatatgaggcttcgccggagaccctgtactaccagatcccaaacctaaag
agcaaacagcaatatttgctctgggtggcagcagttacatcggctggtcgaggcaatgtc
agcaataaggtcaccggggagcctgcagcaaaggcgccagcaaggattattgcatttgga
ggaacggtgactactccttggatgaaagatgtgtttctaccttgccgagctgtaggtgat
ccaggacctaccatcaagtggacaaaagacagtgaggactctgctattccggtgcaagtt
gatggccacagaatgatcttcaacaatggcactttgtttcttcgctctgtcagggcagag
gattctgggtattatacctgcacggctacaaatacctggggctttgacacaatcatcgtc
aacctcttggtgcaagtaccacctgaccagcctcgcttgacggtgtctcgaacttccgcc
tcctccattacattggcttggatacctggtgacaatgggggcagttcaatcagaggcttc
gtgctgcagtactcagttgataacagcgaggaatggaaggatgtcttcatcaaccccagc
gagcgctccttcaaactggacaacctcaaatgtggcacatggtacaaggtaaaactggca
gccaagaacagcgtcggagctgggcgtattagtgagattattgaagccaagacccatgga
agggaacctgctttcaacaaagatacccatctctttacccacattaattctagccatgct
aggcttaacctccaggggtggaacaatggtggctgccccataagggccatcatcatggac
taccgtcccaaaggcacctggccttggcttaccttgagaaccaacctatccaatgagatc
ttcctgcaggacctgcgagaggctacttggtatgagttgaagatgcgagcctgtaacagt
gctggttgtggtaatgaaagcacacagttcgccaccctggattatgatggaagcacaatc
ccaccaatcaaatcgatgcaaggagaaggggatgatgtgaagaagttgtttaccattgct
tgccctgtgatcctggcaacagttgccgtggctctcctgttcattatccggaagaaacgc
aaggaaaagcgcctgaagagactgcgagatgcgaagagcttggcagaaatgctgattagt
aagaataaccgaagcttcgatactccggtgaaagggcagcctcagggaccccggcttcac
atcgacatcccaagagtccagttgctgatagaggacaaggagggaattaaacaactgggg
gaagacaaggccacgatcccagtgacagactccgagtttaatcaatcggtcaacccccag
agtttctgcacgggtgtatctctccatcacccggccttggttcagaacacggggccactg
atcgacatgtcagacatccggcctggcaccaatcctgttgcgaggaagagtgtgaaatca
gcacacagtacaaggaacaggtattccagccagtggactcttacaaagtgtcaggcctca
accccagctcgaaccttaacctctgactggagaactgtgggatcacagcatggaataacg
gtgacagagagtgacagctacagtgccagcctctcccaggacacagacaaaggcagaaac
agcatggtctctacagagagtgcttcctccacctacgaggagttagctcgagcctacgag
catgccaagctggaggagcagttgcagcacgccaagttcgagatcactgagtgcttcatc
tcggacagctcctctgaccagatgaccacaggcacaaccgacaacgccgacagcatgacc
tccatgagcaccccctcggaagctggaatctgcaggttcaccgcgtcacccccacagccc
caggacattgaccgagggaagaatgttgctgtgcccattgctcaccgagctggtgattat
tgcaatctacccctatacgtaaagtcagatgcattcttccgcaagtccgatgcccgcgac
ccttgccctgtggtgccaccgagagaagcctccatccggaacgtggccagagcgtaccag
tcacaaggccggcacctgaccctcgaccccaacagcaagccgcccatccacccgcacgcc
acgaccaccttacctcagaggactctcaccgtgccagcctccacagcccccaccaccaca
acttccagcaacacgagcgccaccagcgctgcccccaccggagcgagcgcccctgctgaa
cctcgactggccgcacacaccaaaataagcagctccagagactcgctactagagatgagt
actgctggactaggccggtcacagaagcagggggcaggagcctattctaagtcctacacc
ctggtgtag
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integrated database retrieval system
