Hemitrygon akajei (red stingray): 140717111
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Entry
140717111 CDS
T11019
Symbol
mkrn4
Name
(RefSeq) makorin, ring finger protein, 4 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
haka04121
]
140717111 (mkrn4)
Enzymes [BR:
haka01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140717111 (mkrn4)
Ubiquitin system [BR:
haka04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140717111 (mkrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
Torus
zf-CCCH_DUS3L
zf_CCCH_4
zf-CCCH_2
zf-CCCH_PARP12
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-CCCH
RING_XB3-XBAT31
zf-CCCH_3
zf-RING_11
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
140717111
NCBI-ProteinID:
XP_072886445
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All DBs
Position
27:9034006..9073287
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AA seq
463 aa
AA seq
DB search
MAEGWSESGARRRRALCRNFIHGACKWGHSCYYSHDLSVQKSSQICRHFLNGSCFYGDYC
RYQHIQPTVGWSSGSRCGSEPALQLRRTGESSRTSHYVESRYHTRGYNPRNRRGSAPTIH
QTAVGSSQPYRTAHSTTEMASWSRRGSEPSVSSSLRLINNECFGMHLEEEAEEDKENETP
SKSELDEGQLSWLFQECDYSSASQAAGSAQCTCQKPNSGVNHLTQNDLKDSLASQSTVKK
KMTTNQAFEMSKDIICGICMDKVYEKTPAKDRCFAILPDCNHAFCVTCIKKWRHSKGFTN
NIIKACPECRVVSSYYIPNRYWVVDEEKQELITKFKAEKRKIRCKFFLQSNGKCPFKSEC
IYLHEFPEGYRPARRQPRKRSNHPPFGLGWNDDDDDDDDDFERALHLFGPPTYVVATNMY
HDLWLFTFPLQDIVAAIRNTLTKGKAEINCTQMHTTKYINLLL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggggtggtcggaaagtggcgcacggcggaggcgggccctttgcaggaatttc
atccatggagcttgcaaatggggacatagctgctattactcacatgacctgtctgtgcag
aaatcatcccagatctgtaggcattttttaaatggatcttgcttctatggagactactgc
agatatcaacacatacaaccaactgtaggatggtcatctgggagcagatgtggctctgag
cctgcccttcagctgaggaggactggagaatcttctcggacttcccattatgtggaatct
agataccacactagaggatacaaccccagaaacaggcgtggttctgctcctactattcat
caaactgcagttggatcttctcaaccttaccgtactgcccactcaactactgaaatggcc
tcttggagtcgacgtggttctgaaccttctgtctcaagttctctgcgcctgataaataat
gagtgctttggcatgcacttggaggaagaagctgaagaagataaggaaaatgaaactcct
tcaaaatcagaacttgatgaaggacaattatcgtggctgtttcaagagtgtgactattca
tcagcatcacaggcagcaggttctgctcagtgtacttgccagaaaccaaacagtggagtc
aaccatttaactcagaatgacctgaaggactctttggcttctcaatctactgtgaagaaa
aaaatgaccacaaaccaggcctttgaaatgagcaaagatattatttgtggaatatgcatg
gataaagtctatgaaaaaacaccagctaaagacaggtgctttgcaattcttcctgactgc
aatcacgctttctgtgtgacctgtatcaagaagtggcgacacagcaagggatttaccaat
aatataattaaagcatgtcctgaatgtagagttgtgtccagttactacataccaaacaga
tattgggtagttgatgaagagaaacaggagcttattacaaagttcaaagctgaaaagagg
aaaataagatgcaagttttttctgcaaagtaatggcaaatgtccttttaaatctgaatgc
atatacttgcacgaatttccagagggataccggccagctcggcgtcagccaagaaagcgg
agcaatcatcctccttttggacttggatggaacgatgatgacgacgacgatgatgatgac
tttgagcgtgcccttcatctttttggacctcctacctatgtcgttgctaccaatatgtac
catgacctctggctgttcaccttcccacttcaggatatcgtggccgccatcagaaacacc
ctaacaaaaggcaaggcagaaattaattgtactcaaatgcacacaacaaaatacatcaat
ttattattatga
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