Hemitrygon akajei (red stingray): 140717118
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Entry
140717118 CDS
T11019
Symbol
ppfia4
Name
(RefSeq) liprin-alpha-4 isoform X1
KO
K26226
liprin-alpha
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
140717118 (ppfia4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
haka04131
]
140717118 (ppfia4)
Membrane trafficking [BR:
haka04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
140717118 (ppfia4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
T2SSF
Motif
Other DBs
NCBI-GeneID:
140717118
NCBI-ProteinID:
XP_072886464
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All DBs
Position
27:10288117..10970845
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AA seq
1253 aa
AA seq
DB search
MMCEVMPTISEDTLNQRGSQNGSEDANFEQLMVNMLDERDKLMETLRETQETLSVTQEKM
QEVAHERDLLQRQLNSALPQEFAALTKELNACREQLLEKEEEISELKAERNNTRLLLEHL
ECLVSRHERSLRMTVVKRQSQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVALER
VSTLEEQLSSANQEMTVLRQQTAHTHRKTAAGEGPEDLHISESTEAALKTTWKRLSNGSI
DPNDEVSQVVEMQDLLEKQNFEMSQMKDRLSSLSARVAELEEELDTARKDLIRSEEMNNK
YQRDIREAMAQKEDMEERITTLEKRYLAAQRESTSVHDLNDKLESELANKESLHRQSEEK
NRHFQELLELAEQKLQQTMRKAETLPEVEAELAQRVAALTKAEERHGNIEERLRQLESQL
EEKNQELGRARQREKMNEEHNKRLSDTVDRLLSESNERLQLHLKERMAALEEKNTLIQEV
ENTRKQLEEYHQDKERLANEIGKLRAEVEQLKLKTGAFAESVHPRTHLGSATDLRYTLSS
VVETQPEHYGTPAVLRRPQKGRFTPLRDEPTKIQTLSEQDWECTQQANVLTSATHAFESD
TEMSDIDDEDGETMFSSADLLSPSGHSDAQTLAMMLQEQLDAINKEIRMIQEEKESTEQR
AEEIECRVGSGSMDGLNLPRIRTGTSIPTSLTALSLTSSSPPVSGRSTPKLTPRSSSHDL
DRMGIMTLPSDLRKHRRKSPVSREDNREDKTTIRCETSPPSSPRTVRLEKLAHSLQSTSQ
EEGRGTLTAEELASNPSSNNSSQDSLHKGSKKKGIKSSIGRLFGKKEKARLGQLSKEMAS
VHGYGYFGGILDAEMAIQDSLTLGKLGTQAERDRRLKKKHELLEDARRKGMPFAQWDGPT
VVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEMV
SLTSPSAPPTSRTSSGNVWVTHEEMENLAASAKTENEEGSWAQTLAYGDMNHEWIGNEWL
PSLGLPQYRSYFMECLVDARMLDHLTKKDLRMHLKMVDSFHRTCLHYGIMCLKRLNYDRK
ELERRREESQHEIKDVLVWTNDQVIHWVQSIGLREYANNILESGVHGALIALDENFDYNS
LALLLQIPTQNTQARQVLEREFNNLLALGTERKLDDGDDKSFRRAPSWRKRFRPREVHGI
TMMPGSTETLPAGFRVTAMSSPAPSVQPKKIQPEVGTSGTQRLDTSTVRTYSC
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatcagcgaggataccctcaaccagaggggctcgcag
aacggctcggaggacgctaatttcgagcagctgatggtcaacatgctggacgagcgggac
aagttgatggagaccctgcgggaaacgcaggaaactttgtccgtcactcaggagaagatg
caagaggtggctcacgaaagggatctactgcagcgccagcttaattcggctctacctcag
gagtttgccgcacttactaaagaactgaatgcctgcagagaacaacttttggagaaagag
gaagagatctctgaattgaaagcagagaggaacaacaccagactcttacttgaacatctg
gagtgccttgtgtcgagacatgagcggtcactgcgaatgacagtggtcaagcgacaatca
cagtctccatcaggtgtctccagtgaagttgaagttttgaaggcattgaaatcattattt
gaacatcataaggctttggatgaaaaggttcgtgagcgactccgagttgccctggagagg
gtatcaacgctggaagagcaattgtcttcagccaaccaggagatgactgtactgagacaa
cagactgcacacacccacaggaaaacagctgccggtgagggtccagaagatttgcacatc
tcagagagcacagaagctgctctgaagacaacgtggaagaggctttcaaatggttccatt
gatcccaatgatgaggttagtcaggttgtggagatgcaggatttgctcgagaaacagaac
tttgaaatgtcacagatgaaagaccgcctgtcctcattatcagcacgtgtggcagaacta
gaggaagaactggatacagccaggaaggatctgatcagatctgaggagatgaacaataag
taccagagagacatcagggaggcaatggcacagaaggaggacatggaggagaggattaca
acacttgaaaaacgttatctagctgcacaaagagagtccacatcagttcatgatcttaat
gacaaacttgaaagtgaactcgctaataaagaatctttgcatcgccagagtgaagagaag
aatcggcattttcaggaactgctggagctggctgagcaaaagctacaacagacgatgagg
aaggctgagaccttgcctgaggtggaggctgaacttgctcaacgggtggcagcactgaca
aaggcagaagaaaggcatgggaacatagaagaacgtttaagacaactggagagccagcta
gaagaaaaaaatcaagaacttggacgggctcgacaacgagaaaagatgaatgaagagcat
aacaaacgtttgtcagacactgtggatcgactgttgtcagagtcaaatgaaagacttcag
cttcatctaaaggaacgaatggctgctcttgaagagaagaacacgttgatacaagaagtg
gaaaatacaagaaaacaactagaagaatatcatcaagacaaggagaggctggcaaatgaa
ataggaaagttaagggctgaagtggaacagctgaaattaaagacaggagcttttgcagaa
agtgttcatccacgaactcatttgggcagtgcaacagatttacgatacacacttagttct
gtagtggagacgcagcctgaacactatgggaccccagcagtgctaaggcgacctcagaag
gggcgtttcacccctctgcgggatgaacccactaagattcagactttaagtgaacaggac
tgggagtgcactcagcaagcaaacgttctgaccagtgccacacatgcttttgaaagtgat
acagaaatgtccgacattgacgacgaggacggcgagacgatgttcagttcagccgatctg
ctttcacccagcgggcactcggatgctcagactctggctatgatgttacaagaacaactt
gatgctatcaataaagaaatcaggatgatccaagaggagaaggagtccacggagcagcga
gctgaggaaattgagtgccgtgtggggagtggaagcatggatgggctcaatttacctcgc
attcgaacgggcacctccattccaacatccctcacagccctgtccctcaccagttcttct
ccacctgtgagtggacgctccacacccaagctaactcctcgcagttcatcccatgacctg
gaccggatgggcatcatgacgctgcctagtgacttaaggaagcaccgtcggaagtctcca
gtgtcaagggaggacaaccgtgaagataaaacaacaatcagatgtgaaacatcacctcct
tcatctccacggaccgtaaggttggaaaaacttgcccactcactgcagtcaacaagtcaa
gaagaaggtcgaggcacattgactgcagaggagctggctagcaatcccagtagcaacaac
agcagccaagactcgttgcataagggttcaaagaagaaaggcattaaatcctctataggc
cgtctgtttggcaaaaaggagaaggcacggctgggccagctcagcaaggaaatggcttca
gttcatggatatggatattttggtggcattctggatgcagaaatggctattcaggactcc
cttactctgggcaaacttggaacacaagcagagagagatcgaaggttaaagaaaaagcat
gaattgctggaggatgctcgacggaaaggaatgccatttgcacagtgggatggaccaaca
gttgtgtcatggctagagctgtgggtaggaatgccagcctggtacgttgcagcctgccga
gccaatgtgaagagtggcgctatcatgtcggctttgtctgacacagaaatccagcgggag
attggaatcagcaatccacttcatcgactgaagctccgcctggcaatacaggagatggtg
tcattaacgagtccatcggcaccaccaacatcaagaacgtcttctggaaatgtctgggtg
actcatgaggaaatggaaaacctggcggcttcagcaaaaacggagaatgaggagggcagt
tgggctcagactctggcttatggagatatgaaccatgaatggattggtaatgaatggctc
cccagtcttggattgcctcagtatcgtagctatttcatggaatgcttagtggatgcaaga
atgcttgaccatttaaccaagaaagacctgcgaatgcatttgaagatggttgatagcttt
catcgcacatgtttacattacggtataatgtgtctaaagagattaaactacgacagaaag
gagctggagcggaggagagaagaaagccaacatgaaattaaagatgtgttggtgtggact
aatgaccaagtcattcattgggtgcaatctattggacttcgtgagtatgcaaacaacatt
cttgaaagtggagtacatggagccttgatagccctagatgaaaattttgattacaacagt
ttggcattactattgcagattcccacacaaaatactcaggcaaggcaggtcttggagcgt
gaattcaacaacctgttggccttaggaactgagcgcaagttggatgatggtgacgacaaa
agtttcaggcgcgcaccatcatggcgaaaacgctttcgtccacgggaggtacatggtata
accatgatgccggggtctacagaaacactgcctgcagggttcagagttacagcaatgtcc
tccccagccccgtctgtgcagccgaagaaaattcaaccagaagttggtacatcagggaca
cagaggttagatacatcaacagtacgcacatactcctgctga
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integrated database retrieval system
