Hemitrygon akajei (red stingray): 140717256
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Entry
140717256 CDS
T11019
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
140717256 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
haka04515
]
140717256 (nfasca)
Cell adhesion molecules [BR:
haka04515
]
Immunoglobulin superfamily
L1 family
140717256 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
V-set
Ig_DSCAM-DSCAML_C
Bravo_FIGEY
C2-set_2
Ig_5
V-set_CD47
Ig_6
DUF4998
Adeno_E3_CR1
BiPBP_C
Tissue_fac
Fn3-III_PB4
DUF4959
Motif
Other DBs
NCBI-GeneID:
140717256
NCBI-ProteinID:
XP_072886733
LinkDB
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Position
27:complement(35815828..36100016)
Genome browser
AA seq
1347 aa
AA seq
DB search
MLPREGILLHLRLLLILTLSHQVTSIEVPLDPNLQNQLNQPPTITKQSPKDYIVDPRDNV
MIVCEGKGNPTPVFSWTRNGKYFNVAKDSRVSMRSRSGTLVMDFRYSGRAEDYEGEYQCS
ARNDHGTALSNKIYLQVSKAPLWRRGNVEPFVVQEGASVVLPCQPPAGLPPPVIFWMNSN
MDLIPQDTRVSQALNGDLYFSNVKRSDARFDYICNARFPFTQTIQQKNPITIKVLTMDTN
YESVPTVLNETDARPVTEQIPKFMVPEGTSSSRIILREEDLLLECIASGVPTPDIVWYKK
GGELPWPKVRMENFNKTLRIMNVSEENSGEYFCLASNKMGSIRHTITVRVKAAPYWLNEP
QNLVLAPGEYGRLLCRANGNPKPNIQWLVNGEPLEKVRQNVNRDVSGDTIIFREAQIGTS
AVYQCNASNEHGYLLANAFVSVLDVKPRILSKRNQVIKVIENNRTQLECRFFGSPIPVLR
WFKDGQGNNLYGGNYIIHDNGTLQLRRARKSDEGTYTCIATNVLGKAENRLRLEVKEPTR
IIKAPESTIVKRSHAARFDCKVRHDPTLRLKVTWLKDDKVLSLPWRAKEDEDSLTIINVS
ERDEGTYTCVARTDLDSDSAKARLTVLVVPSTQITPLAAVLKDRPAPPRDLELTDPEDRS
IRLTWIPGDDNNSPITEFIVQYEENRYEPWKWHNLTRIPGNINSAVLQLAPYMNYQFRVI
AVNEVGEGAPSMPSERYQTTGAAPEINPVDVRGAGITESSMEIRWTPLSGTQVSGPNIRY
VVSWRQRGVRGEWSTVTVTRPSYIVSPTPLFTPYEIKVQAVNDFGPGPEPNIIIGYSGEE
YPNATPTSISGRNINSTAILLQWTALPQENIRGYLIGYRIQYWNEGSLLKSTRYRSRVEV
MESTGQRPRAIVSGLQPYSMYKMQVAAVNGRGASPWSEVFAINTTEGVPGKPASLRIRQP
DLETITLQWTPPRDPNGIITGYMINYHPLTGSRARRNSTIPRLPPDMTSYKLERADASTR
YRFYVFAQTSQGNGEAIMLDSPLFENEVTPTAEIAITEGVISGFIPMPTISAETSITTEA
TTTTTTTTSVAPPTTTVTEFVPPAVTGTRIYVEAPGRIWNLTTSAGNDLVNITWNHDFSS
EMAEFMVEYIHSNGTAKQQQVKVGQNSTQILGLTPGILYKVRVYSALFPFVTSNTTTFET
SPAYTNNHVSIATQGWFIGLMCAVALLVLILLIVGFIKRSKGGKYPVKTTEENRPSQDDN
GYLSLESDNEDSKKPQGSQSSVDGTVKQEESDDSIVIYGDGDENSRFGEDGSFIGQYTVK
KDKEETEGNDSSEATSPVNPAYSLAQM
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgctaccaagggaaggcatcctactgcacttaagattgctgctcatcttgactctaagt
caccaagttacatccattgaagtccctctcgatccaaaccttcagaatcagttgaaccag
cctccaaccatcaccaagcagtctccaaaggattacattgtagatccacgggataacgta
atgatcgtttgtgaaggaaaagggaacccaacgcctgtattctcatggactcgcaatgga
aagtatttcaatgttgccaaagattctagagtgtctatgagatcgcggtcgggaactctg
gtcatggacttccgatacagtggccgggcagaggactacgagggcgagtatcagtgctca
gccagaaatgaccacggcacagcgctctccaacaaaatatacctccaggtttccaaagct
cccctgtggcggagagggaacgtggagccatttgtagttcaggaaggagcatccgtggtt
cttccctgccaaccgcccgcaggtctcccgcctcctgtcatcttctggatgaacagcaat
atggatctgatccctcaggatacgcgcgtctctcaggctctgaatggggatctctacttc
tccaacgtgaagcgcagtgatgcacgctttgattacatctgcaatgcccgatttcccttc
actcagaccatccagcagaaaaaccccatcaccatcaaagtactaaccatggataccaat
tacgaatcagtgccaactgttctgaatgaaactgatgctcgccctgtcactgaacaaatt
ccaaagttcatggtgccagaagggacatcgagcagcagaatcattctacgagaagaggac
ctattactggaatgtattgcatcaggagtgcccacgccagatatcgtttggtacaagaaa
ggtggtgaattgccgtggccaaaagtgcgaatggaaaacttcaacaagacgctaaggatc
atgaatgtttcagaggagaactcgggcgagtatttctgcctggcatccaataagatgggg
agcattaggcacaccatcacagtgagagtaaaagctgctccttactggctgaatgaaccc
cagaacttggtgctagctcctggggagtatggcagacttctgtgccgagccaacgggaac
cccaagcccaatatccagtggctggtgaatggtgaacctctagaaaaggttcgtcagaat
gtgaatcgagatgtctctggggacacgatcatcttccgagaggcacagattggaaccagt
gccgtataccagtgcaatgcttccaatgagcacggatacctactggccaatgcatttgtc
agcgtgctagatgtaaaaccccgaatcctttccaaacgaaaccaggtcatcaaggtgatt
gaaaataaccggacgcagctcgagtgcaggttctttggctctccaatccccgtcctgcga
tggtttaaggatggacagggcaataatctttatggtgggaactacatcatccacgacaat
ggcactttacagttgcgtcgggctcggaagtcagatgagggaacctacacttgcatagca
accaacgtattgggaaaggcagagaacaggttgcggctggaagtcaaagaaccaacaagg
attataaaggccccagaatccaccatagttaagagatcacatgctgccagatttgactgt
aaagtgaggcacgatccaacattgcgactgaaggtaacctggctgaaagacgacaaagtt
ctctccttaccatggagggcaaaggaagacgaggattctttaacaatcatcaatgtgtcg
gagcgagatgaaggaacctacacctgtgttgcccgcacagacctggacagcgactcagcc
aaggcacgtctcactgttctagttgttccttccacccaaattaccccgcttgctgctgta
ctaaaagaccgtcctgcaccccctcgagatctggaactaacagacccagaagaccgtagc
ataagactgacctggattcccggtgatgacaacaacagcccaatcacagaattcattgtg
cagtatgaagaaaataggtatgagccttggaagtggcataatctaaccagaatcccaggc
aatatcaactctgcagtgctgcagcttgcaccatacatgaactatcagttccgggttatc
gctgtgaatgaagttggtgaaggtgcccccagcatgccctccgaacgttaccagacgact
ggagcagctcctgagataaatcccgttgatgttagaggagcaggaataacggaatccagc
atggagatcaggtggacgcctctgagtggcacccaggtcagtggtcccaatatcagatat
gtagtcagctggagacaacggggcgtgcgtggagagtggtcaacggtcacagtgaccagg
cccagttacattgtctctccgacacccctctttacaccctatgagattaaagtccaggcg
gtgaatgatttcgggccaggtccggagccaaacatcataatcgggtactcaggcgaagaa
tatcctaatgcaacaccaactagcatctctggaaggaatattaacagcactgccattcta
ctgcaatggacggcgctgcctcaagaaaatatccgcggataccttataggctacaggatt
cagtactggaatgagggaagtctgctgaagtccacccgataccggtcacgcgtggaggtt
atggagtccactgggcagcgcccgcgtgccattgtctcgggactgcagccgtacagtatg
tacaagatgcaagtggcagcagtcaacggcagaggcgctagtccttggagtgaagtgttt
gcgattaacaccactgaaggagtgcctgggaagccagcttcccttcggatccggcaaccg
gatttggaaaccatcacgttgcaatggactcccccaagggatccaaatgggattatcacc
ggctacatgataaattaccacccattaactggctcccgggcacggcgcaattccacaatt
cccagacttccgcccgacatgactagttacaagctggagcgggctgatgcgagtaccagg
tacaggttttacgtcttcgctcagaccagtcaaggtaacggagaggcaatcatgttggac
tcgcccctctttgaaaatgaagtcacccctactgctgagattgcaataacagaaggagtc
atctcaggatttattcccatgccaaccatctcagctgaaaccagcataacaaccgaagcc
actaccaccaccaccaccaccaccagcgtcgcgcccccgaccaccaccgtcaccgaattc
gttccgccagccgtcacaggcactcgtatatatgtggaagctcctggtagaatttggaac
ctcactacatcagcaggcaatgacttggtcaatatcacgtggaatcacgatttctcgagt
gaaatggccgagtttatggttgaatacattcacagtaatggcacggcgaaacagcagcag
gtgaaggtcggtcagaactctacccagatcctgggcttaacgcccggcatcctgtacaaa
gtgcgagtatactccgccctgttcccgttcgtcaccagcaacaccaccacctttgagacc
agcccagcctacaccaacaaccatgtttccatcgccactcaaggctggttcatcggcctg
atgtgtgcggtggctctcctggtcctcatcctactgatcgtgggcttcattaagaggagc
aaaggaggcaagtacccagttaaaaccacagaagagaatcggccttcacaggatgacaat
ggatacctgtctctagaaagtgacaacgaagacagcaaaaaacctcagggcagccagtct
tcagtggatgggacggtgaagcaagaggaaagcgatgacagcatcgtcatttatggtgat
ggtgatgaaaattcccgctttggtgaggacggctccttcatcggccagtatacggtcaaa
aaagacaaagaggagacagagggcaatgacagctcagaggctacgtctccagttaacccg
gcctactccttggcacagatgtga
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integrated database retrieval system
