Hemitrygon akajei (red stingray): 140717271
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Entry
140717271 CDS
T11019
Symbol
snrpe
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140717271 (snrpe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haka03019
]
140717271 (snrpe)
03041 Spliceosome [BR:
haka03041
]
140717271 (snrpe)
03032 DNA replication proteins [BR:
haka03032
]
140717271 (snrpe)
Messenger RNA biogenesis [BR:
haka03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
140717271 (snrpe)
Spliceosome [BR:
haka03041
]
Complex A
U1 snRNP components
Sm proteins
140717271 (snrpe)
U2 snRNP components
140717271 (snrpe)
Complex B
U1 snRNP components
140717271 (snrpe)
U4/U6.U5 tri-snRNP components
140717271 (snrpe)
Complex C
U2 snRNP components
140717271 (snrpe)
DNA replication proteins [BR:
haka03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
140717271 (snrpe)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
140717271
NCBI-ProteinID:
XP_072886792
LinkDB
All DBs
Position
27:complement(38554725..38570986)
Genome browser
AA seq
92 aa
AA seq
DB search
MAYRGQAQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEIHMKSKARKPLGRVMLKGDNITLLQSVPT
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccggggccaagcgcagaaggttcagaaagtgatggtgcagcccatcaacctt
attttcagataccttcagaatagatctcgaattcaagtatggctatatgagcaagtcaac
atgaggatagaaggctgtataatcgggtttgatgaatacatgaacctcgttttggatgac
gcagaggagattcacatgaaatcaaaagccaggaaaccactgggtcgtgttatgctgaaa
ggggacaacatcaccttgctacagagtgtccccacttag
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