Hemitrygon akajei (red stingray): 140717647
Help
Entry
140717647 CDS
T11019
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04120
Ubiquitin mediated proteolysis
haka04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
140717647 (syvn1)
04120 Ubiquitin mediated proteolysis
140717647 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
haka04121
]
140717647 (syvn1)
Enzymes [BR:
haka01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140717647 (syvn1)
Ubiquitin system [BR:
haka04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140717647 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
Prok-RING_4
zf-RING_Vps41
zf-Nse
Motif
Other DBs
NCBI-GeneID:
140717647
NCBI-ProteinID:
XP_072887359
LinkDB
All DBs
Position
28:7200698..7259547
Genome browser
AA seq
632 aa
AA seq
DB search
MVRSMLATATSLVLTTTVITHAYYLKRQFYPTVVYLTKSSPSMAVLYIQAFVLVFLVGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVAIFTLLLFLKCFHWLA
EDRVDFMERSPNISVLFHFRVTSLMGLLTVLDLLFVNHACHSIITRGASVQLVFGFEYAI
LLTMVLTIFIKYVLHSIDLQSENPWDNKAVYMLYTELLTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLTMRQFKKAVTDAIMSRRAIRNMNTLYPDASPEELQLTDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRTTLPAQTPAPPPAQPQAPIVPQQPN
LPPGMMPPFPPGLFPFWPPVANLGQNFFPQAPGVAPNTPQPGPSAPSGSDAQSNAANGDA
SRASEPAAGTSLEPPPAGAIPGFPFSLPPFPSAPWMGMPPPPFAMPPMPMPPSGFAGLTE
EELRTMEGQERQNLEARLQCLQNIHTLLDAAMVQIHQYLSVVATLSPPRPPAAATAESTV
PSTETAELAAGSQTSSPEEPGPSPAPVADNSSAQRAPTPEEIGQSDLEGAVGYTPLPSDN
LPEDGEESLGEPDTAELRRRRLRKLEQPNAQQ
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggtccgatcgatgttggccacggccaccagcctggtgctcaccaccacggtgatcacc
cacgcctactacctgaagcgtcagttctaccccacagtggtgtacctcaccaagtctagc
cccagtatggcggttctgtacatccaggcgttcgtcttggtcttcctggtcggcaagttc
atgcgaaaggtgttcttcgggcagctgcgtgctgcagagatggagcatttgatcgagcgc
tcctggtacgctgtgactgagacatgcctggccttcaccgtcttcagggacgacttcagc
ccgcgctttgtggccatcttcaccctgctgctcttcctcaagtgcttccactggctggct
gaggaccgcgtagacttcatggagcggagtccgaacatctcggtgctgttccacttccgg
gtcacttcgctcatgggcttgctgaccgtgctggacctgctctttgtgaaccacgcctgt
cacagcatcatcactcgaggagcctctgtccagctggtgttcggcttcgagtacgccatc
ctgctcaccatggtcctcaccattttcatcaaatacgtcctgcacagcattgacctgcag
agcgagaacccctgggacaacaaggccgtttacatgctctacacagaactcctgactggg
ttcattaaagtcctgctctacatggccttcatgaccatcatgatcaaggtgcacacgttc
cccctgttcgccattcgccccatgtacctgaccatgaggcagttcaagaaggcggtgaca
gatgccatcatgtcaagacgagccattcgcaacatgaacacgctgtaccctgacgccagc
ccagaggagctgcagctgacggacaacgtctgcatcatctgccgggaggagatggtgacc
ggggccaagcgactaccctgtaaccacatcttccacaccagctgcctccgctcctggttc
cagaggcagcagacctgccccacctgccgcatggacgtgctgcggaccacactgcccgct
cagacgcccgcgccgccgccggcccagccgcaggcgcccatcgtgccccagcagccaaac
ctgcctccggggatgatgccacccttcccaccggggctcttccccttctggccgcccgtg
gcaaacctcggccagaacttcttcccccaggctccgggtgtggcccccaacacgccgcag
cccggcccttcggctccctccggctcggacgctcagtctaacgctgctaacggcgacgca
tcgcgggccagcgaaccagcggcagggaccagtctggagccgccgcctgcgggagcaatc
ccgggattccccttctccctccctcccttcccgtcggccccctggatgggaatgccaccg
ccgccctttgcgatgcctccgatgccgatgcccccgtctggttttgccgggctgacggaa
gaggagctgcggacgatggaagggcaggagcggcagaacctggaagcccggctccagtgc
ctccagaacattcacacgctgctggacgcggccatggtccagattcaccagtacctctcg
gtcgtcgctaccctcagccccccaaggccgccggcagcagcaacggccgagagcacggta
ccaagcacagagacggcggagctggcggctggatcacagacgagttcaccggaagagccc
ggcccctctccagccccggtggctgacaacagctcggcacaacgcgctccaacgcctgaa
gaaatagggcagagtgacctggaaggcgctgtgggctacaccccgctgccctcggacaac
ctcccggaagatggggaagagtctctcggagagccggacactgccgaactgcgccgacgg
agactacggaagctcgagcagcccaacgcccagcagtaa
DBGET
integrated database retrieval system
