Hemitrygon akajei (red stingray): 140718248
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Entry
140718248 CDS
T11019
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haka03400
]
140718248 (ap5b1)
DNA repair and recombination proteins [BR:
haka03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
140718248 (ap5b1)
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
RavZ_C
Motif
Other DBs
NCBI-GeneID:
140718248
NCBI-ProteinID:
XP_072887847
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Position
29:complement(16160454..16180158)
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AA seq
926 aa
AA seq
DB search
MAMSPHSEWAQKVAAFRASPTRFLASTTAENFVQDLLRILTDEKMGESIKVQVLAVLQEF
PTSLFTSSQSAERAVESIFNSYLQLPLVLKLLTLKCQLLLSVTTVVISTDHLISDQKVLK
NLMKQLLDVVGDSNDHKNGVNFRPLRAMACNCLQEFETCYPGLLSGKLELLSALRKEEVT
PLHQAYTLLYGQALKNAIHTISQVHNASEGAIREMLVRNEGIKWKVMEKQRDLAAVTMTT
NFSLMTSADETKELKSCVSLLLEECFLLTPVSQAILLRELAQIVIMVHSLSPAIFRSQIL
RLFGTMDISLLHTILYMKTTFTDSLFTAEDENLLLKRLVVMAQHPLLNVPLRLFYMDCLL
HFPENRPINSNLEENLPVTFTPRMANCLFPTLFNDSSTMLARLNLLSLVCLENTEEERGV
TELFDYLMSLYKLVDISGNRERIVTFFQAMYIFVGHFYSNEECMSQLTNHIVQLYKKHCS
LAPHMINLLDSTQNLLEDCKWSVSLAGALQKLVVELPFQHLTSSNLMWHLKILARVAKES
TIAQKATIQFLLSVTQSSDLCERGDWRMGNAILSVCRNILHCQNLEPTFRALADLLQHIH
LWFQDIDIQDHAHLYYVLLTCLSGEKLSRVVAAGPGNYSQAKMRSLSLMAESAGSSISIL
PIKHPILQLTPFPEDDSPTVSPPGETSDQDLEIDYFEQYLEQFHDPGFVSTIEQKFYLSF
TEEVDSHFHKLFTILVHFDLQNSHYESLRDLHVPCLLFNKEPHVFSLVFKPRLPFPFTLH
TNAIFTTEDGDTYCSQLEPVDIDFPRLFLPFPVPLSWPSDVKASLFNKLWASLIQTESTQ
SALSRFCFKMVQRSLCDLVQSHFQKYVVSQHSEPESYQVFLFLPPRVNILFQLEQMDDIV
KVDIVTNNWKLLPFINSYFLDVTSEK
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggctatgtcacctcattccgaatgggcccagaaggtcgctgcattccgtgccagccca
acacgtttccttgccagtacaacagctgagaactttgtgcaagatctactgagaatcctc
acagatgagaaaatgggcgaaagtataaaggtgcaggttctggccgttcttcaggagttt
ccgacttcgttgttcaccagctcgcagtcagcagaaagggcggtggaatcgatcttcaat
agctatttgcagctgccgctggtgcttaagttacttactctgaagtgccaactactgctg
tcagtaaccaccgtggtaatttccaccgaccatctgattagtgatcagaaggtattgaag
aacttgatgaagcagctgttggatgtggtgggtgactcaaacgatcacaaaaatggtgtg
aactttaggcctctcagggccatggcgtgcaactgccttcaagaatttgaaacttgctat
ccaggtctcctgtcggggaaactggagcttctgtctgctctgcggaaagaagaggtgact
ccattgcaccaggcctacacgctgctgtacggccaggccttgaaaaatgcaattcacacc
atctcacaggtgcataatgcttctgagggggccattcgtgagatgctggtacggaatgaa
gggatcaagtggaaggtgatggagaaacaacgcgatttggcagctgtcactatgacaact
aatttctcgttgatgacttctgctgatgagacaaaggagttgaagtcttgtgtatcgtta
ctgctggaggaatgcttcctcctgactccggtatctcaagctatcttgcttcgagaattg
gcccagatcgtaattatggtgcactcactttctccagcgattttcaggtcacagatattg
cgtctgtttgggacaatggatatatccttactgcacaccatattgtacatgaaaacaacc
ttcactgacagccttttcacagctgaggacgagaacctccttttgaaacgactggttgta
atggcccaacacccactgctcaacgttcctctcagactcttctacatggactgtctgctc
cactttcctgaaaaccgtcccattaactctaacctggaggagaaccttccggttacattc
acccccaggatggcgaattgcctgttccccaccctctttaacgacagcagtacaatgctg
gctcgtctcaatctgttgagtcttgtgtgtcttgagaatacagaggaagaaagaggggtc
actgagctctttgattacctgatgtctttgtacaaactggtggacattagtggaaacagg
gagagaatagtaacatttttccaagctatgtacatatttgtgggacacttctattctaat
gaagagtgcatgtcacagttgactaaccatatagtccagttgtacaaaaaacactgcagc
ttagctccacatatgataaaccttttagatagcacccaaaacctactggaagattgtaag
tggtctgtttcactagcaggggccctgcagaagctggtagtggaactaccatttcagcac
ttgacttcttctaatctcatgtggcaccttaagatcctggctagagtggccaaagaaagc
acaatagcccagaaggcaaccattcagttcttgctgagtgtcactcagtcatccgacttg
tgtgagaggggggactggcgaatggggaatgccatcctgtccgtctgcaggaacatcttg
cattgtcagaatctggagcccaccttcagggccctggcagacctcttgcagcacatccac
ctctggttccaagatattgacatccaggaccacgctcacttatattacgtgctactcact
tgtctctctggcgagaagctgtcaagagttgtggcggcaggaccaggcaactatagtcag
gccaagatgcgctcactttccctaatggcagaaagtgcaggctcctcaatctccattctt
ccaattaagcatccaatactacagctgactccatttccagaagacgattctcccactgtc
agtcctcctggagaaaccagtgaccaggacctcgaaatagattactttgagcaatacttg
gagcagtttcatgatcctggatttgtttctacaattgaacagaaattttatttgagtttt
acagaggaagttgattctcattttcacaagctctttaccatacttgtacactttgacttg
cagaactcccactatgaatcattgagagatcttcatgtaccctgtcttctcttcaacaaa
gagcctcatgttttctccctggtgttcaagcctcggttacccttccctttcaccttacac
accaacgccatctttaccacagaggacggtgacacttactgcagtcagctcgagcctgtt
gacattgatttcccacggctcttcctgcccttcccagtgcctctcagttggccatcggac
gtcaaggctagcctttttaacaagctgtgggcgtcactgatccaaactgaatccacccaa
tctgctctcagtcgtttctgctttaagatggtccaaagatctctgtgtgatcttgtacag
tcacattttcagaagtacgtggtctcacaacattcagaaccggaatcttaccaagttttt
ctcttcctgcccccgcgcgtcaatattttattccaactagaacaaatggatgatattgtg
aaggttgatatagtcacaaataactggaaacttttaccattcattaattcttactttctg
gacgtgacgtctgaaaaatag
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