Hemitrygon akajei (red stingray): 140718271
Help
Entry
140718271 CDS
T11019
Name
(RefSeq) PR domain zinc finger protein 2-like
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka00310
Lysine degradation
haka01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
140718271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haka03000
]
140718271
03036 Chromosome and associated proteins [BR:
haka03036
]
140718271
Enzymes [BR:
haka01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
140718271
Transcription factors [BR:
haka03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
140718271
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
140718271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-H2C2_2
zf-C2H2_11
zf-C2H2_ZNF462_1st
Zap1_zf1
zf-C2HE
zf-C2H2_3rep
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
140718271
NCBI-ProteinID:
XP_072887887
LinkDB
All DBs
Position
29:19795465..20056159
Genome browser
AA seq
1518 aa
AA seq
DB search
MEELDSNLMSAPKVELLVDVPQRILKGLPQEVTLQQSAVDERRLGVWATRFIQKGRKYGP
FSGERKKKSQVKSNVYMWEVYFPQFGWMCIDATDPNKGNWLRYVNWARSSNEQNLFPLEI
NRGIYYKVFKPIQPGEELLVWYNGEDNPDIAAALEEERNNHLHKRSSPRGRKGRKKSRRQ
KLGTEEGLVQGYQKHETCVSRTNSSEQRILVHRIVTQKVMAQPKDLQMSLETEMTSEENS
IENLAKKKIPIKSLKQKPKGDQNGMQDIEETHMFPCKNCERRFTTKQGLERHQHIHVSTE
GFTFKCRYCGKAFGTHINMRRHERRHEAGPKKKPMLKVNISGQHQKSDFDFDKTAVDICP
DPSSRLESPTALKTDSETLAPNLDNSALKSSEPKIQHPCKLCKKTFGSYTNLRRHQRRIH
ERHLLAKGIKMRRKGSAEDHDLTSEQARAAGGLHVTSTETEDDDEDEEEDEETDECQAYI
MDVSSNISENLNYYIDGKIESNSSTSNCEVIEVDTACTNPFGLPSVLYPVTDESPQNLKT
MTQVSVSQSLLNELKDSDLKCPKRRRTTSPPPFPKAKTEVSVETTSPVVSPFCSQSLTGQ
TSSLSGHQEKCSLSSKLKQLLQIQENNSPRSTLFPDASIGPSTSTAAPMGFGRFKRRTSS
PPNSPQHSPVLSSTGKDSDFIRIWNENVPGLKAAKIESQSSSPAWSLSSRDENLSPMSLE
MCKITASKEYAPNRPVTNLCTHQPLDLSSGFKLQSDIKTEVEGPGITILDLSLNKKLCSE
NEVKEEMGVAGAQVSCSSKKKKPTTSVLEKVLMNEYNGTMKQDSEDSPQPCLEVEAPPNP
VSTPPLATTPTPVTTPAPSPPPPVLSVPSPLPESVTQVLQSITPALSPVSINIKEEVKDE
GYPDTDSERELNNNHPPTIEPESPQETLIKNCAEEQESTENSQPAEQEEKPEPAFTKSFQ
CNVCEAPFLSIKDLAQHLLVHAEEWPFKCEFCVQLFKESTALSEHRSSLHGVGKIFVCSV
CKKEFAFLCNLQHHQSDLHPGQQCSHIELENGILRPQNFTDPGKATSCLSQSIGESSTPP
SPPAPAPQEGAEDDDDSSDLTEELYTTIKVMASGIKPKGPDVRMGLNQRYPSFKPPPFQY
HNRNYASAVSSAVNFTTHNIPQTFSTAIHCTKCGKSFDNMPALHKHILACASASDKKRYT
PKKNAIPLKRKVWKKNGAIAAEPVKQNTIRRMGQPKRLNFEIETKPKMTMSKIKMNELKN
RKNKLVQKAISQKNRSSAKEKAMLKSRSSESHNCPYCEKEFTYLGSLNKHVTYSCPKKPA
SPPAKGSSSHSPASSDKGGGQRRRTADTEIKLQSTPVLLGKRRGRMLGPLQTESVSSASK
LQQRMKPMPSVKSKKPNTSPIASRTASPVRSAKISPAEGKRLKSDPRQRSSTTSTMTSPR
LYLRMKNKKVVWQRKTNVVKQKRSERYMGKTKETRTGAVTRSGAPTVTDSNDSEMEDDQE
NQGSSSSGVQVSSLKMVR
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atggaggaactcgatagcaatctaatgtctgcacccaaagtggagctgttagttgacgtg
ccccagcggatattgaagggacttcctcaagaggtgaccttgcagcagtcagcggtggat
gaaagacgcctaggtgtgtgggccacgaggttcattcagaaaggacgaaaatatggtcca
ttttcaggggaaaggaagaaaaaatcccaggtcaaaagcaacgtgtatatgtgggaggtt
tacttcccccaattcgggtggatgtgtattgatgccacagatccaaacaagggcaattgg
ttgcggtatgtgaactgggctcgctcctccaatgagcagaacctcttcccgctggagatc
aacaggggtatctactacaaggtcttcaagccgatccaaccgggggaggaactgctggtg
tggtacaatggggaagacaacccagacattgcagctgctctagaggaagagagaaacaac
catctgcacaagaggagctctcccagaggcaggaaaggaaggaagaaatctcggcggcag
aaattaggaactgaggaaggacttgtgcaaggttatcagaagcatgaaacttgtgtctca
cgaaccaattcatcagagcagagaatattagttcatagaatcgttactcagaaggttatg
gctcagccaaaggacttacagatgtctctggagacagaaatgacatctgaagaaaattct
attgaaaatcttgcaaaaaagaaaattcctattaaatctctgaagcagaaaccaaaagga
gatcagaatggaatgcaagacattgaagaaacacacatgtttccctgcaaaaattgtgag
cgcagatttaccacaaagcaaggtctggaacgtcaccagcacatccacgtatcaacagaa
ggtttcacgttcaagtgccggtattgtggtaaagcctttggcacccacatcaatatgaga
cgccatgagcgacgtcatgaagctgggcccaagaaaaagcctatgttaaaagtgaacata
tcaggacaacaccagaagagtgattttgattttgataaaacagcagtcgacatctgtcct
gatccttcaagtagactagaaagcccaacagctctgaaaacggattctgagactttagcc
ccaaatctggacaattctgccttaaagagttctgaaccaaaaatccaacatccttgcaaa
ctgtgcaaaaagacttttggctcttacacaaacctgcggcggcaccagcgccgtatccat
gagcgtcacctcttggctaagggcattaagatgagacggaagggttccgcagaagatcac
gatctaacctctgagcaagccagggctgctggtgggcttcatgttactagcacagaaact
gaagacgatgatgaagatgaggaggaggacgaagagactgatgaatgtcaggcatacatc
atggatgtttccagtaacatctctgaaaacttgaactactatattgatgggaaaattgaa
tcaaacagtagtaccagcaactgtgaggtgattgaggttgacactgcttgcacgaatcct
tttggactaccttctgtgctgtatcctgtgacagatgaatcaccacagaatcttaagacc
atgacacaagtttcagtatcccaatctcttctgaatgaactgaaagacagtgatttgaaa
tgtcccaaaagaaggcggaccaccagccctccaccatttccaaaggcaaaaactgaagtt
agtgtcgaaaccacatcaccagttgtttcaccattttgcagtcagtctctgactggtcag
accagcagtttgagtggacatcaggagaaatgtagcttatcttccaagctcaagcaactc
cttcagatacaagaaaataattcacccaggtcaactttgtttccagatgcctcaattggt
ccatcaacctcaacagcagcaccaatgggatttggtcgattcaagaggagaacaagttca
ccaccaaattcaccgcagcatagtccggtactaagcagcacaggaaaggactctgatttt
atacgtatatggaatgaaaatgtacctggtttgaaagcagcaaaaatcgaaagccagagt
agttctcctgcctggagtctctccagccgagatgaaaacctcagtccaatgagtcttgaa
atgtgtaaaataacagcttctaaggaatatgcaccaaatcggcctgtgactaatctctgt
acccaccagcctctggatctgtccagtggttttaaattgcagtctgatataaaaacagaa
gtggaagggcctggaataaccatcttagatttgagtttgaataagaagttgtgcagtgag
aatgaagtcaaagaggaaatgggagttgctggtgctcaagtttcatgtagcagtaaaaag
aagaaacctacaacttctgtattagagaaagtacttatgaatgagtataatggcacaatg
aaacaagactctgaggacagtcctcagccatgtctagaggtagaggcaccacctaatcct
gtctcaaccccacctttggctacaaccccaactccagtaacaacccctgctccttctccc
cctcctccagtcctctctgtcccttcgcccctaccggagtctgtgacccaagtcctgcag
tcgataactccagctttgtcaccagtcagcataaacattaaagaagaagttaaagatgaa
ggctatccagatacagacagcgaacgtgaattgaacaataaccacccacccaccattgaa
ccagagtccccccaagaaacgctcattaaaaactgcgctgaagagcaggagagtacagaa
aactctcagcccgcagaacaagaggaaaaacctgagccagctttcactaaaagtttccag
tgcaatgtctgtgaagctcctttcctttccatcaaggatcttgcccagcatttgttggtt
catgctgaagaatggcctttcaaatgtgagttttgtgtgcagctcttcaaagagtcaact
gcattgtctgagcaccggtcttctttgcacggggtgggcaagatctttgtgtgctctgtt
tgcaagaaggagtttgcattcctttgcaatttacagcaccatcaaagtgatctacatcct
ggccagcagtgctcacacatagaattagaaaatggaatactgagaccccagaacttcaca
gacccaggcaaggccaccagctgtcttagccagtcaattggagaaagttccacaccacca
tcaccaccagcaccagcaccgcaagagggagcagaggatgatgatgattctagtgactta
acagaggagctgtacactacaataaaggtgatggcatctgggataaaacccaagggccct
gatgtccgtatgggtctcaatcaacgttaccctagcttcaagccccctccatttcaatat
cataaccgcaattacgccagtgcggtgtcatcagctgtaaattttaccacacacaacatc
cctcaaacttttagtacagccattcactgcacaaaatgtggcaaaagctttgacaacatg
cctgcacttcacaagcacatcctggcctgcgcatctgccagtgacaagaaacgatacacc
cccaaaaaaaacgcaatcccgctgaaaaggaaggtctggaagaaaaacggggcaatcgct
gcagaaccagtcaagcagaacaccatccgaaggatgggccagccaaaaaggcttaacttt
gaaatcgagacaaagccaaaaatgaccatgagtaagatcaaaatgaatgaactgaaaaat
cggaagaacaaattggtgcaaaaggcaatctcgcagaagaaccgttcatctgcaaaggag
aaagccatgttaaaaagcaggagctcagaaagccataattgcccttattgtgagaaagaa
ttcacttacttaggaagtctgaacaaacatgtaacatatagttgtccgaagaaaccagca
tcccctcctgccaaagggtcaagctctcactccccagccagcagtgataagggaggtggc
cagcgcaggaggaccgcagatactgaaatcaagttacagagtactccagttctcttggga
aaaaggagaggaaggatgttgggacctttacaaactgagtctgtttcttcagcctcaaag
ttacagcagcgtatgaaacccatgccttcagtaaaatcaaagaagcccaacacatctccg
attgcttccaggactgcaagtccagtaaggtcagctaaaatctcaccagcagagggaaag
aggttaaagtcagatcccaggcagcgatcttctaccacctctactatgacttcgccacgg
ctgtacctccgaatgaagaataagaaagttgtttggcagaggaagacaaatgtggtcaaa
caaaaaagatctgagagatacatgggaaagaccaaggaaacacgaacaggcgctgttaca
cgaagcggggctccaacagttactgatagcaatgacagtgagatggaagatgatcaggaa
aaccagggatcatcatcatcaggtgtccaggtttcctcattgaagatggtgaggtaa
DBGET
integrated database retrieval system
