Hemitrygon akajei (red stingray): 140718484
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Entry
140718484 CDS
T11019
Symbol
ddx19a
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03013
Nucleocytoplasmic transport
haka03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140718484 (ddx19a)
03015 mRNA surveillance pathway
140718484 (ddx19a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haka03019
]
140718484 (ddx19a)
Enzymes [BR:
haka01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140718484 (ddx19a)
Messenger RNA biogenesis [BR:
haka03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
140718484 (ddx19a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
140718484
NCBI-ProteinID:
XP_072888436
LinkDB
All DBs
Position
29:complement(46461567..46508131)
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AA seq
495 aa
AA seq
DB search
MAAESWARAVDLQESAAESLSNLKLKEESSNAEPKEAVVKQDRSDKVDKANKPDKSGDSE
NAKPDEDDREDKAAQSLLNKLIRSNLVQSSHQVEVLQRDPNSPLYSVKSFEELHLKKELL
QGVYGMGFNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVDLTQRHPQ
CLCLSPTYELALQTGQVIEQMGKFCPDIKLAYAVRGNRLEKGQKIPEQIVIGTPGTVMDW
CIKLKFIDTKKIKVFVLDEADVMIATQGHQDQSIRIQKTLPANCQMLLFSATFEDSVWKF
AQKVVPDPNIIALKREEETLDTIKQYYVMCNSKEEKYQALCNIYGAITIAQAMIFCHTRR
TAGWLAAELSKEGHQVALLSGEMMVEQRAAVIQRFRDGKEKVLVTTNVCARGIDVEQVSV
VINFDLPVDKDGNPDCETYLHRIGRTGRFGKRGLAINMVDSKYSMNILNRIQEHFNKKIE
KLDTDDLDEIEKITN
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgagtcgtgggcgcgggcggtcgatctgcaggaatcggcagccgagtcgctg
agcaacctgaaactgaaagaagaaagttcaaatgctgagccaaaagaagcagtcgtaaag
caagatcgttcagataaagtggacaaagccaataaaccagacaagagtggtgatagtgag
aacgccaagccagatgaagatgacagagaggacaaggctgcccagtccttgttgaataaa
ctcattcgtagtaacttggttcagtcgtcacaccaggtggaagtgctgcagagagaccca
aattctccactctactcagtgaagtcatttgaagagctccatttgaagaaggaacttctg
caaggtgtatatggaatgggatttaacagaccttcaaagatccaggagacagcattaccc
atgatgcttgcagagcccccacagaatctgattgcgcagtctcagtcgggtactgggaag
acagcggcctttgtcctggctatgctcagtcgcgtggatcttacacaaagacatccacag
tgtttatgcctctctccaacatatgagctggccttacagaccggacaagtgattgagcag
atggggaagttctgtcctgatatcaagctggcatacgctgtgcgaggaaatagacttgag
aaaggccagaagattccggaacaaattgttataggaacacctgggaccgtcatggactgg
tgcataaagctgaagttcatagataccaagaaaataaaagtttttgtcttggatgaagct
gatgtcatgattgctactcaaggacaccaggaccagagcattcgaattcagaagacgctg
cctgcaaattgtcagatgctgctgttctcggctacctttgaagattccgtatggaagttt
gcccagaaggtcgttcctgatcctaatatcatcgcgttgaagcgagaggaagagaccttg
gatacaattaaacagtattatgtcatgtgtaacagcaaggaagagaaataccaggctctg
tgtaatatctatggagcaataaccatcgcccaggccatgatcttttgccatactcgcagg
acggccggctggctggcagcagagctgtccaaggaagggcaccaggtggcgctgctgagt
ggcgagatgatggtggaacaacgagctgctgtgatccagcgcttccgcgatggcaaagag
aaagtcctggtcacaacgaacgtctgtgcacgaggtattgatgttgagcaggtctctgtc
gtcatcaactttgatctcccagtggataaggacgggaacccagactgcgagacgtacctt
caccggattggacggacaggccgtttcggcaaacgtggcttggctatcaatatggtggat
agtaaatacagcatgaacatcctgaacaggatccaggaacatttcaacaagaaaattgag
aaacttgacaccgatgaccttgatgagattgagaagattactaactga
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