Hemitrygon akajei (red stingray): 140718814
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Entry
140718814 CDS
T11019
Name
(RefSeq) transmembrane channel-like protein 3 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
haka02000
]
140718814
03037 Cilium and associated proteins [BR:
haka03037
]
140718814
Transporters [BR:
haka02000
]
Other transporters
Pores ion channels [TC:
1
]
140718814
Cilium and associated proteins [BR:
haka03037
]
Other cilia and associated proteins
Stereociliary proteins
140718814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
140718814
NCBI-ProteinID:
XP_072889098
LinkDB
All DBs
Position
30:complement(11656247..11744984)
Genome browser
AA seq
1131 aa
AA seq
DB search
MSQTTGDKPSKTSRRLQSIRRNSINRRIYSAAYQEYENSNSEEDAPEDEKADCKDPKEIL
QNIQIQKEIIADIRVRAWPMDKKLKVLRQAKEIVLKYEGRLTRTRGYQAAGAEMWKKFGR
LVYNIMVLFIPWEMRIKKIESHFGSGVASYFIFLRWMFGINIVLTIMTGAFVILPELLAG
APFGSIPSKTIPAGHVGSAQDLDTIWSLGASISPFLPHSQYYHSVNCSNVSLCQCLFLTL
TLSVTQGYLQYSVMFYGYYGNKRKIGWAGYHLPLAYFMVGMAVFAYSFIILLRKMAKNSR
LSMASASDENYTFCWKVFCAWDYLIGNPEAAESKTAAVINSIREAILEEQVKKKDRSLAV
IISLRILANILVLLSLAGSIYIIYFVVDRSQELERTKIELTLWEKNEVSVVVSLITMIAP
SVFELVAQLEMLHPRTTLRFQLARVLVLYLGNLYSLIIALLDKVNSMSMSDNVNDTGTAF
LATRAFPEENLSTIVPDIELKQNITFSSGDNKTKPVIKFNKTAIYDYNILTQQDQCWETY
VGQEMLKLSIIDMLFTVGSILLIDFIRGLFVRYLSDCWCWDLENKFPEYGEFKIAENVLH
LIYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAM
TLFMLFLCMLPTVFAIARYRPSSTCGPFSGQDKIYDIVFETIVNDFPGWFNTVMGYVTSP
VVVLPALLLLFMLIYYLQSIARSLKYTNNQLRMQLQVERTEDKKKVFQMVAARFQHLEEG
HKKSEHESDATSQESSIQSSPRRNGSIMNFDIPNSAGTHIQSISHQVDRPASAPRGTNLA
QSPAASVAQKHRSEHFPQRHPGPMPGAAGGLYRARPSSVRSDVPFRKCIRPLSYSPAEGP
PQTILGRRVHTAHYILVNERGSRKRLMRPNTRMPKHFKVDESREVVEMLPRSMKRFSVHG
TQRAGSQMHFSEEEDEEDMEQRAFSRSPRPHSLSDLHQPTRFYIGDSKDSRLLIGKDLAQ
IQYESYHEERELPQDHAAPGTSNTQQSSKEQGPAGKLKVKQKADQSLTESDSLSVASSSD
QQNSSTDQYIQVIHRKEKVLKSSSDKLTRPKLRAKVELTAAEANELICSNV
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgagccagacaacaggcgacaagccctcaaaaacatcgcggcggctacagagtatccgc
agaaactccatcaatcgcaggatctactcggcggcttaccaagagtatgagaacagtaat
tccgaggaggatgcgccagaggacgaaaaggcggattgcaaggatccgaaggaaattttg
cagaacatacagatccagaaggaaattatcgccgacatccgagtcagagcgtggcccatg
gacaagaagttgaaggtgctgaggcaagccaaagaaattgtgctcaagtatgaaggcagg
ttgacgaggacgagaggctatcaagcagctggggcagagatgtggaagaaatttgggaga
ctggtgtacaatatcatggtacttttcatcccgtgggaaatgagaatcaagaaaattgaa
agtcattttggctctggtgtggcttcttactttatttttttgagatggatgtttggcatc
aacatagtgctgacgataatgacaggagcatttgtcatcttaccagagcttttagcagga
gctccatttggcagtattccaagcaaaactattcctgcggggcatgttggatctgcacaa
gatctggacaccatctggtcacttggggcaagcatttcaccatttttgccacacagccaa
tattaccattcagtaaattgctcaaacgtttcattatgccagtgtctgtttctgacttta
actctgtccgtcacacagggctacctccagtactccgttatgttctacggctactatggc
aacaagaggaagatcggatgggcaggctaccatttgcctctggcctactttatggttgga
atggcggtgtttgcctatagcttcatcatccttttgcgaaaaatggcaaagaactccagg
ctgagcatggccagcgcctccgatgaaaactacaccttctgctggaaggtcttctgtgct
tgggattatctcatcggcaatcccgaggctgctgagagcaagacagccgcagtcatcaac
agtattagagaggctattctggaggagcaagtgaagaaaaaggacagaagcctggcagtg
attattagtttaagaatccttgccaatatactggtgcttctctcattggccggaagtatt
tacatcatttactttgttgttgaccgctcacaggagctggagcgcactaagatcgagttg
acgctctgggaaaagaatgaggtgagtgtcgtcgtttcgcttattacaatgattgcccct
tccgtattcgaactggtggctcagctcgagatgctgcaccccagaacgacactgcgcttc
cagctcgccagggtgctggtgttgtacttgggcaacctctacagtttaatcattgctctg
cttgacaaagtgaatagtatgagcatgtcggataatgttaatgatacgggcacagcattt
ttagcaaccagagccttcccagaggagaatctctcgaccattgtacctgacattgagttg
aagcagaatatcacattcagttcaggagacaacaaaacaaagcctgtaatcaagtttaat
aagactgctatatacgactacaacatcctgacccaacaagatcaatgctgggaaacctat
gtagggcaggagatgctgaagctgtctattattgacatgcttttcactgtcggcagcatt
ctgcttattgacttcatccgtgggctctttgttcgatacctgagtgattgctggtgctgg
gatctggagaataaatttcctgagtatggggaattcaagatagctgagaatgttctgcat
ctgatatacaatcaggggatgatatggatgggtgctttcttctccccgtgccttccagca
ttcaatgttctcaaactgattggcctgatgtatttaaggagttgggcagtgttgacctgc
aatgttccacaccagcaagttttccgagcttcaaggtctaacaacttctacctagccatg
accttgttcatgctcttcttgtgtatgctaccaacagtgtttgccatcgcaaggtacagg
ccatcctcgacctgcgggccttttagtggccaagataaaatttatgacattgtgtttgag
acaatagtgaatgatttccctggctggtttaacacggtgatgggttatgtcaccagtcct
gtggtggttctgcctgctctgctcctcctctttatgctgatctattatctccaatcaatc
gcccgctcactgaagtataccaataatcaactcaggatgcagctccaagttgaaagaact
gaagataagaagaaagtattccagatggtagcagcaagatttcagcacctggaggaaggc
cacaagaaatctgagcatgaaagtgacgccacaagtcaggagtcctccattcagtcgtcg
ccccggaggaatgggagcatcatgaactttgacatccccaacagtgcagggactcacatt
cagagcatttcgcatcaggtggatcgtcctgccagtgcccctcggggtactaatctagca
caaagcccagctgctagcgttgcccagaaacaccggagtgagcacttcccccaaaggcat
ccaggtcccatgccaggagctgcaggtggcctctatagagcaaggccttcttccgtccgt
tctgatgtcccatttagaaagtgcatcaggccgctgagctactcaccagcagagggtccc
ccacagacaattctcggccgcagagtccacacagcccattatatactcgtcaatgagcgt
ggatcgaggaagaggttaatgcgtccaaacactcggatgccaaagcatttcaaggtggat
gagtccagggaggtggtggaaatgctgccaagaagcatgaaaaggttttcagtgcacgga
acacagagggcaggttcgcagatgcacttcagcgaggaggaagacgaagaggacatggaa
caaagggcatttagcaggtcacctcgcccccactcgctgtctgatctccaccagccaact
cgcttctacatcggtgacagcaaggacagtcgcttgctgatcgggaaggacctggcccaa
attcagtacgaatcgtaccacgaagagcgtgagttaccgcaggatcatgctgctcccggg
acgtcgaacacccagcagagcagcaaagagcagggtcctgccggcaagttgaaagtgaag
cagaaagcagaccagtcactgactgaatcagactcgctatctgtagcatcgagcagcgat
cagcaaaatagcagcaccgaccagtacattcaggtcattcacaggaaggagaaggtcttg
aaatcttccagtgacaaactaactaggcccaagttaagagcaaaagttgaactaactgct
gcagaggctaatgaactgatatgttcaaatgtctaa
DBGET
integrated database retrieval system
