Hemitrygon akajei (red stingray): 140718820
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Entry
140718820 CDS
T11019
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
140718820 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
haka03009
]
140718820 (efl1)
Ribosome biogenesis [BR:
haka03009
]
Eukaryotic type
Pre-60S particles
GTPases
140718820 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
GTP_EFTU_D2
EFG_III
EF-G_D2
MMR_HSR1
EFG_IV
Pet191_N
Motif
Other DBs
NCBI-GeneID:
140718820
NCBI-ProteinID:
XP_072889104
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All DBs
Position
30:complement(13152640..13433580)
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AA seq
1130 aa
AA seq
DB search
MGHTNLANIVDLQKNTANIRNICIIAHVDHGKTTLADSLIASNGIISNRLAGKLRYMDSR
EDEQIRGITMKSSSISLHFSMDNQEYLINMIDSPGHVDFSSEVSTAVRVCDGAIVVVDVV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIIELKLTPLEAYIHLQKILEQVNAVTGSL
FTSKVLEERAEMDVTPEPSLDSKTSGQIYDWSAGLEETDDSHLYFAPEQGNVVFGSAVDG
WGFRIEEFVQMYSEKVGIKAEVLLKTLWGDYYLNTKAKKIMKGAQSKGKKPLFVQLVLEN
IWSLYEAVVVRRDKEKINKIVNSLGLSILPRDSRHTDPRVHLNAICTQWLPISQAVLSMV
CRKLPSPLDITEERVEKLMCVRSRRFDSLPTETQSLKQAFLECKSDETAPVIVFICKMFA
VDPKGIPQNKPRPLTQEEIAQRREQARKRLAEKLAEKQCQQLGENPEISAANASTKDIQV
PNQMEQAGQQESEQKDHFIAFARVYSGTIRRGQKLYVLGPKYDPSEALAKLPENYAPGED
LLIPHLSCCTVEDLYLLMGKELEDVQEVPVGNVLGIGGLEDHVLKSATLSTSPLCPPFTP
LNFEATPIVRVAVEPKHPCEMPQLVRGMKLLNQADPCVEVLVQETGEHVLITAGEVHLQR
CLDDLRERFAKIEISSSAPIVPFRETIIRPPKVDMVNEDMGTQQKIAVIHQKKEDQNKYP
EGVIVDSDGLVTLHTPNKLSTVSVRAMPLPESVTQLLEENSDLIRTMELFNLSVKEGREA
QEINLTTLEAIKTFKQKLEENFVGRKWRNAVNQISSFGPRRYGPNILLNGLKNYDRPSMW
QCLDKSSRDSRAYRNFDNSIISGFQLATLSGPVCEEPLMGVCFILEKWDMSNKVEQFVQP
STEEQASKTEVHQEVTSEENSLTDLKPLLESPKQQTDQTESSQTLAKSLDDGKCNSEVAL
MDCYGPFSGQLIATMKEACRFAFQAKPQRLMAAMYTCEIMATAEVLGRVYAVLSKRAGRV
LQEEMKEGTEMFIIKAVLPVAESFGFADEIRKRTSGQASPQLVFSHWEVIASDPYWVPTT
EEEYLHFGEKSDTINQAQRYMNTVRKRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgggtcatactaatttggcaaatattgttgacctgcaaaagaatactgccaacatcagg
aatatctgtatcatagctcatgtggaccatggaaaaaccacgttagccgatagccttatt
gctagcaatggaatcatttctaatcgacttgcaggaaagttacggtatatggacagtcga
gaagatgagcagatccgaggaatcacaatgaaatccagttccatatcattgcacttcagt
atggataatcaagaatatctcatcaatatgattgattctcctggtcatgtggatttttct
tctgaagtatctactgccgtgcgtgtgtgtgatggtgctattgttgtcgttgatgttgtt
gaaggtgtttgtcctcagactcaggcagtgctgcgccaagcttggttggaaaacattcgc
ccagtattagtaattaacaaaatagatcgactgatcattgaactaaagctaactccattg
gaggcttatattcatttgcagaagattctagaacaggtaaatgcggtaactgggagtctt
tttacttcaaaagtattggaagagagagcagagatggatgtcacaccagagcccagttta
gactctaagaccagtggacagatttatgactggagtgctggcctggaagaaacagatgat
tcacatctttactttgcccctgagcaaggaaatgtggtttttggaagtgctgttgacggc
tggggcttcagaattgaagagtttgtccagatgtacagtgaaaaagtgggtattaaagct
gaagtgctgctgaagactctttggggtgactactatctgaacacaaaagcaaagaagata
atgaaaggagctcagtcaaaaggcaaaaagcctctctttgtgcaattagtgctagaaaac
atctggagcttgtacgaggctgtggttgtccgaagggacaaagagaaaattaacaagata
gtaaattcactaggtctatccattctacctcgtgattcacgacacacggatcctagagta
catctcaatgccatctgcactcagtggcttcccatctcccaggctgtgctgtcaatggtc
tgtcgcaagttacctagcccattggatattactgaggaacgggttgaaaagcttatgtgt
gtgcgcagcagaagatttgattcattgccgaccgaaacccaatcactcaaacaagcattt
cttgaatgcaagagtgatgaaacagctccagtcattgtatttatttgcaagatgtttgct
gttgatcccaagggtatacctcagaataagccaagacccctgactcaagaagaaatagct
caacggcgtgagcaggccaggaaaagacttgctgaaaaacttgctgaaaaacagtgtcag
caattgggagaaaacccagagatctctgccgccaatgcaagcacaaaagacatccaggta
ccaaaccagatggaacaggcaggacaacaggagagtgagcagaaagaccacttcattgcg
tttgccagggtatacagtggaacaatccgcagagggcaaaagttgtatgtgctaggccca
aaatatgacccttcagaggctttagccaagttgcctgaaaattacgcacctggtgaagac
ctattgatcccacatctgagttgttgtacagtggaggacttgtatctgctaatgggtaaa
gaactagaagatgtccaagaagtacctgttggcaatgtgctaggtattggtggcttagaa
gatcacgtattaaaatctgccacgttgtcaacttctcctttatgtccaccttttacacct
ttgaactttgaagcaacccccattgtacgagtagctgtggagcccaaacatccatgtgaa
atgccacagctggtgaggggaatgaagttacttaaccaagctgacccatgtgtggaggtg
ctagtccaggagacaggagaacacgtattaataactgccggagaagtccacctccagcgt
tgcttagatgacctcagagaaagatttgcaaagattgaaataagttcatcagcaccaatt
gttccattcagagagactatcattcgaccaccaaaagtggacatggtaaatgaagatatg
ggcactcagcaaaagatagctgtcattcaccaaaagaaagaggaccaaaataaatatcct
gaaggcgtcattgtggattctgatggactggtgactttacatacacccaataagttatcc
actgtcagtgtgagagccatgccacttccagaatcagtgacacagttacttgaagaaaac
agtgatctgattcgtacaatggaactgttcaacctatcagtaaaagaaggcagagaagct
caagaaataaacttgaccacacttgaggctatcaagacatttaagcaaaagctagaagag
aattttgtaggccggaaatggagaaatgcagtgaaccaaatttcatcatttggaccacgg
cgctatggccccaatattttactgaatgggttaaaaaactacgataggccgtcgatgtgg
cagtgccttgacaaaagcagtagggattcaagagcctaccggaattttgacaatagtata
atcagtggatttcagctggctactctttcaggtcctgtatgtgaagaacctcttatgggc
gtttgcttcattttagaaaaatgggacatgagtaataaagtggaacagtttgttcaacct
tccacagaggaacaggcatcaaaaactgaggtgcaccaagaggtaacttcagaagaaaat
agcctcactgatttgaagcccctgttagaaagcccaaagcaacaaactgatcagactgag
agcagccagactctcgccaaaagtttggatgatggaaaatgtaactctgaagtagcgctt
atggattgctatggtcctttctctggccagctcattgccacaatgaaggaagcttgtcgt
tttgcatttcaggcaaagcctcagcgattaatggcagcgatgtatacgtgtgagattatg
gcaactgctgaagtgttaggtcgagtctatgcagtcctttcgaaacgagcaggccgggtg
ttacaggaagaaatgaaggaagggacagaaatgttcatcatcaaggctgttttgccggtt
gcagagagctttggttttgctgatgaaatcaggaagcggacaagcggccaagccagccca
caacttgtgttcagtcactgggaggtaattgcaagtgacccatactgggttccaacaaca
gaggaagagtacctgcactttggagagaaatctgatactataaaccaagcacagagatac
atgaatacagtgcgcaaacggaagggactgtatgtggaagagaagatcgttgagcatgct
gaaaagcaaagaaccctcagtaaaaataaataa
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