Hemitrygon akajei (red stingray): 140718890
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Entry
140718890 CDS
T11019
Symbol
dmxl2
Name
(RefSeq) LOW QUALITY PROTEIN: dmX-like protein 2
KO
K24155
rabconnectin-3a
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
140718890 (dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
haka04131
]
140718890 (dmxl2)
Membrane trafficking [BR:
haka04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
140718890 (dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
140718890 (dmxl2)
RAVE complex
140718890 (dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_WDR3_2nd
EIF3I
WD40_Gbeta
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_LRRK2
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
NBCH_WD40
VPS11_N
Motif
Other DBs
NCBI-GeneID:
140718890
NCBI-ProteinID:
XP_072889256
LinkDB
All DBs
Position
30:complement(25496247..25641514)
Genome browser
AA seq
3054 aa
AA seq
DB search
MHLHQVLTGAVNPGDNCYSVGGIDDIPFTAYASGCDIVILGSDFECVQIIPGAKHGNIQV
GCVECSLQQGRIAASYGNTVCIFEPVPLRHHKRKLVLNYQWQKMGQFFLQSMAYNLAWDP
QGNQLLTATDHLQLWTYPSDDILEEESNLAEECKLQPDLNDWKCNWQSKTAIPIYLMKWS
PDGEYFATAGKDDSLLKIWYLTHGWKSAFLGGEILGGKSASTAMDFSFVYLAHPRAVTGF
SWRKTSKYMPRNSVCNVLLTSCQDGICRLWAETLLPEDSLFGGQMAETPISTSTTNLSHS
GSQKDKIQHALETIHHLKHLSGRRRSSVLIAHKEVLPSQLGSHEVHRQISHYANALCHFH
IAASINPNTDIPPALAGTAFNIEEGGGNFVVHWLNNKELHFTSSMEIFMEHLRKLTDQQM
ENEIDIASMNGLKMKLDTEQEETSEKGSEYDTEEAEQDDRTKIYSSSYTGIPLPTILLDR
KIEALQTEWNKNADMLFTIHPIDGSFLVWHVKYLDEYHPGIFRQVQVAFSSRIPVAFPIG
DANSLSRNIMMYACTVKNVKHLPDNDPKINGVTHGVNGSKINIVTPSVMMISKHIDGSLN
QWAVTFAEESAFSTVLIVSHKFRYCGHRFHLNDLACHSVLPLLLTSSHHNALMTPESDVE
KEIIEPVKSLKGPRIQQVKNAATRTFHDPNAIYSELILWRMDPIGPLSYSGGVSELARIN
SLHTSAFSNVAWLPALIPSYCLGTYCNSASACFVASDGQNLRLYQAVVDARKLLDELSDP
EISKLVGEVFNIVSQQSTARPGCIIELDVITAQCGSNTQLLHVFQEDFILGYKPQEEKNK
DQGVSFTQPVQGYHAPSFSEKFYLVVIEREKRQSILHMWHLHLKSVQPRMAEMSASDKLL
TVSDEKSFGLSPNSLPRSASVANLQTASKLILNSKLVYSQQLNLPEGVEVIRATPSAGHL
SSSSIYPVCLAPYLIVTSCSDGKVRFWRCTVDKNSKSEEVRAYCWETWPLMNEEGEHNNS
AVSVTGRPVAVSCSYTGRLAVAFKESLQPNGITSKEFSMHVSIFECESTGGSEWVLEQTV
HLDDLGKVGGVLDSRVSVDSNLFVYNKSDLYLKGKNMMSSIKHLVHLDWVSKEDGSHILT
VGVGSKILMYGRLSGIVTEQATNKDGLAVITLPLGGSIKQGTKSKWVLLRCVDLISSVDG
TPSLPVSLSWVRDGILVIGMDCEMHVYAQWKHSTKPLSNTENGSVSSFDELIDADVFESK
MLPKRQCVVDGTTTGDDVFGVPGMIQDGGLFEAAHILSPTLPQYHPTQLLELMDLGKVRR
AKAILSHLVKCIAGEVAIFRDKDPGEGGGPRRHLSRTISVSGSTGKDTVIAGREGTRDYT
EIDSIPPLPLYALLSADQDTTYKIAEKTAKIDKGSQPQSKKLEDQYADLFQSASLSTDDF
VDFVIEKKESKSKVINLSQYGPTYFGPEHARVLSSHLMHSSLPGLTRLEQMFLVALADTV
ATTSTEVNENRDKNYSGETLDECGLRYLLAMRLHICLLTSLPPVYRLQLLHQGLSTCHFA
WAFHSEAEEELLNMIPAIQKGDPQWSDLKAMGVGWWIRNINTLRKCIEKVAKAAFQRNND
ALDAALFYLAIKKKAVLWGLFRSQQDKKMTDFFKHNFSEDRWRKAALKNAFALLGKQRFE
QAAAFFLLAGSLKDTIEVILEKMDDIQLAMIIARLYESDYETSSTCKSILYEKVLGCKPG
GSEFAPSKLHPDPFLRSIAYWTMKDYSNALDTLLEQPTKSTEEHPGILIKSCNPAVFSFY
NYLRAHPLLMRRHFAPPEGSLATLGLAKEKISEDEINLIERKLFFTTANAHFKVGCPVLA
LEVLSKIPRVMKKSKPSLTTESSSTSDQDKNGAVENKRSTIGANWPQTSSGLEWETSNSA
GIDWSAPVVTFSDEPLKLEWDNDLEDDYEEEEAGGLNMKDAEMVKETNIEKGVPQEFQSV
PREDSTSNDSRVDVIAEQLKFRACLKILMTELRTLATGYEVDGGKLRFQLYNWLEKEIHA
MHQICNYKTEVKDVVVEINKKISDSFDQDEVTESIEAASYERHQIDRRRLQAKQEHAERR
KWWLRRNQALLRVFLSYCSLHGAQGGGLASVRMELVFLLQESQQETTVKQLQSPLPLPTT
LPLLSAAIASTKTVIANPIMHLSNHIHDILYTVVQMNCPPLPGLKDDTVFILHTSAASLS
ACIYQSLCDSHSYSQTATNLFTGMVYQGLLLGERRRLRTESIEEHVTPNSSPSHWPGVSS
LINLLGSVQEDDQPKLNVLLCEAVIGVYLSLLIHGLATQDSNELFRLVAHPLNNRTWAAV
FGGGAKTIIKPKKRPEITPGIPNVSAVLNLEQNTALKTEILDVSVSPSCETGTRHTPELD
VPPEDIDRYRRRFNMKMLVPGRPVKETSTPPPVPVDRPSYKEKFIPPELSMWDYFVAKPF
MPPSESGFMYDSDESIPSDDDDDDDAFISDIQLQEHSDPNSYSWALIRLGMVKLALNNVK
NFFPVAGLDFADLPVTSPLGNAVMKTLENWQQILQAKMEQFEGPPPNYINTYPNDFSNVG
GPAILRHKAMLEPENTPFKSRHYSTFPVKRLWYFLVKQEVLQDAFIRFIFTKKRKQSESV
EDHVEQVKQNYVREHRGSNKVEADMGYPGGKSKIIHKDSDAIMAFAINKANSNEIVLAST
HDVQELDISAILAAQPFTWIGEDSDRDSRSSDDLEHRSVGSSSQTSTTHFASSQLSSSSS
MPWLGSGQTSTGATMIIKRNLNNVKRMTSHPAHRYYLTGAQDGSVRMFEWNRPQQVICFR
QAGNARVTRLYFNTQGNKLGVADGEGFLSLWQVNQTGSNPKPYLSWQCHSKAAGDFAFVT
SSSLITTAGQSNDSRNVCLWDTLISPHNSLVHGFVCHENGATVLQYAPKQQLLISGGRKG
FVCIFDIRQRQLLHTFQAHDSAIKALALDSAEDYFITGSAEGNMKVWRLTSHGLIHSFTN
EHAKQSIFRNIGAGIVQLEIRPDNRIFSCGADGTLKTRVLPDYLNIPSGIFDSL
NT seq
9165 nt
NT seq
+upstream
nt +downstream
nt
atgcatctccatcaggtgctgaccggagctgtcaaccccggcgacaactgctactcggtc
gggggcatcgatgacattccgttcacggcttatgcttcaggatgtgacatagtcattctc
ggaagtgactttgaatgtgttcaaatcatccctggtgctaaacatggaaatatccaagtc
ggctgtgtggaatgttcccttcagcaaggccggattgctgcttcatatgggaacactgtt
tgcatttttgagccagtaccattacgacatcacaaaagaaagcttgtcctaaactatcaa
tggcagaaaatggggcagtttttccttcagtccatggcatacaacttggcttgggatccg
caaggtaatcaattattgacagctacagatcatttacagttatggacctatccctccgat
gacattcttgaggaagaaagtaatcttgctgaggaatgcaagttgcaaccagatttaaat
gactggaaatgcaactggcagagcaagactgctattccaatatatctgatgaagtggtcg
cctgatggagaatactttgcaacagcaggaaaggatgactcccttctcaaaatatggtat
ctgacccatggctggaaatctgcatttctaggcggagaaattcttgggggaaaaagtgct
tctacagctatggacttttcctttgtatatctggcacatcctcgtgcagtaacaggattt
tcatggcggaagactagtaaatatatgccaaggaactctgtgtgcaacgtgcttctgact
tcatgtcaggatggtatctgccggctgtgggctgaaacattattgccagaggacagtctt
tttggaggacaaatggcagagactcccatcagtacatcaaccaccaacctctctcatagt
ggaagccagaaagacaaaatccagcatgctctggagacaattcatcatttgaagcatcta
agtgggcgccgcagatcttcagttctgattgcccataaggaagttttaccaagtcagctt
gggtcacatgaagtccacagacaaatttcacactacgctaatgcactttgtcacttccat
attgcagcaagcattaatccaaatacagatattccaccagcactagctggaacagctttt
aacattgaagaaggtggtggaaattttgtggttcattggctgaacaacaaagagctgcat
tttacatcatctatggaaatattcatggagcatttgaggaaactcacagatcagcagatg
gagaatgagattgacattgccagtatgaacggattgaaaatgaaattagacactgaacaa
gaagagacttcagagaagggatcagaatacgacacagaagaagctgaacaagatgataga
accaaaatatattcatcatcctatactggaattccactaccaaccattttgttagatcga
aaaattgaagcactgcaaactgagtggaacaagaatgctgatatgctgtttacaatccat
cctatagatggttcatttttagtgtggcatgtgaagtatttagatgagtaccatccagga
atatttagacaagtccaggttgcattttcatctcggattcctgttgcttttcctattggt
gatgcaaactcactcagcagaaatataatgatgtatgcatgtactgttaaaaatgttaag
catctccccgataatgatccaaaaatcaatggagtgacccatggtgtgaatggttcaaaa
ataaatattgtcacaccatctgttatgatgatttcaaaacatattgatggatcattaaac
cagtgggcagtgacttttgctgaagaatctgcctttagcacagttctgattgtatcacat
aaattcagatattgcggacatcgttttcatctcaatgatttggcttgtcattcagtgttg
cccttgctgttgacttcttcacatcacaatgctctcatgacacctgagtctgatgttgaa
aaagaaatcatagaacctgtgaaatccttaaaagggccaagaatacagcaggttaaaaat
gctgccacacgaacatttcacgaccctaatgccatctacagtgaactgatcctgtggcgt
atggacccaattggaccgctatcatattctgggggtgtatcagagttggcacgtatcaat
tccctgcacacttcagccttttcaaatgtagcctggcttccagcattgatcccaagctat
tgccttggcacatactgcaactctgccagtgcatgttttgttgcttctgatggtcagaat
ctcaggctttaccaggctgttgttgatgcaagaaaacttctggatgaattgtctgatcca
gaaatatcgaaacttgttggagaagtgttcaacatagtaagccagcaatcaacagctcgt
ccaggttgcattattgaactggatgtaataacagctcagtgtggctcaaacacacagcta
cttcatgtatttcaggaagattttatcctgggatataagccacaggaagaaaaaaataag
gatcaaggagtgtcttttactcaacccgtacaaggatatcatgcaccatcattctccgaa
aagttttaccttgtggtaatagaacgtgagaagaggcaatctattcttcacatgtggcat
ctccatttgaagtctgtgcagccccgtatggcagaaatgagcgcatcagataagctgctg
actgtatcagatgaaaagagctttggcttatcaccaaattctctcccgcgctctgcatca
gttgcaaatcttcagactgctagcaaattgatacttaactccaaattggtctatagtcaa
caattaaatctgcctgagggagtggaagtaatccgagcaactccttctgcaggtcacttg
agttcatcttccatttatccagtctgccttgcaccttatctaatagtgacgtcatgctca
gatggtaaagtaagattctggcgatgtactgtggataaaaactcaaaatctgaagaagta
cgtgcatattgctgggaaacttggcctttgatgaatgaagaaggagaacacaataacagt
gcagtgagtgtaactgggcgccctgtggcagtaagctgttcatacacgggccgtttggct
gtggctttcaaagagtctctacagcctaatggtattacttcaaaagaattttcaatgcac
gtctccatttttgaatgtgaatccactggaggatcagagtgggtgctggagcagacagtt
catttggatgatttaggcaaggttggaggtgtcctggattcaagagtcagtgttgatagc
aatttatttgtgtataataaatcagacctatatcttaaaggcaaaaacatgatgtctagc
ataaaacatttggtgcacttggactgggtatcaaaagaagatggttctcatattcttaca
gttggagtgggttccaaaattctaatgtacggaagactatcagggattgtaactgaacaa
gccacaaataaagatggattagctgtaattactttgccactaggtggaagcattaaacaa
ggcacaaagtcaaaatgggtattgctgagatgtgtggatttgatatcttctgtagatgga
acgccttcacttccggtttctttatcctgggtgagagatggcattctagtaattgggatg
gactgtgaaatgcatgtgtatgcacaatggaagcattcgacaaagccattaagcaatact
gaaaatggaagcgtatcatcttttgatgaattaattgatgctgatgtatttgagtctaaa
atgcttccaaagcggcagtgtgtggttgatggaactactactggagatgatgtgtttgga
gtcccaggaatgattcaagatggtggattgtttgaagctgctcacattctctctcctact
cttcctcaatatcaccccactcagctactggaacttatggatttaggcaaggtgcgcaga
gctaaggcaatcctttcacatttggttaagtgtattgctggagaagtggccatctttagg
gacaaagacccaggtgaaggaggaggtcctcgacgccacctttctcgaactatcagcgta
agtggaagtacagggaaagacacagttatagctggaagagaaggtactcgtgattataca
gaaatagactcaattccaccactacctctttatgcattgctatcagccgatcaggacaca
acgtataaaattgcagagaaaactgcgaaaatagacaaaggctcacaacctcaaagtaaa
aaactggaggatcagtatgctgatttgttccagtccgcaagcttaagcacagatgatttt
gtggattttgtaattgaaaagaaggaatccaagtccaaagtcattaatttatcccagtat
ggaccaacgtacttcgggcccgaacacgctcgtgtgctttccagtcatttgatgcactca
agtttgccaggacttacacgattagaacagatgtttcttgtagctttagctgacacagtg
gctaccacaagcacagaagttaatgaaaacagggacaagaattattctggtgaaactttg
gatgaatgcggcttacgttatttgcttgccatgcgcttgcatatttgtctcttgacatca
ctgcctccagtttatagacttcagcttttacatcaaggcttgtctacgtgccactttgcc
tgggcctttcattctgaagctgaggaagagttgcttaatatgatccctgccatacagaaa
ggggatcctcagtggtctgatctgaaagccatgggagtgggctggtggattcgaaatatt
aatacactccgcaaatgcattgagaaggttgctaaagctgctttccaacgaaacaacgat
gcattggatgctgcgttattttatcttgctataaaaaagaaggctgtactctggggttta
ttcagatctcagcaggataagaagatgactgacttcttcaaacacaattttagtgaagat
agatggcgtaaagcagctttaaagaatgcatttgctttgctgggtaaacagcgctttgag
caagctgctgcatttttccttttggctggttctttaaaggataccattgaggtgatcttg
gaaaaaatggatgatatccagttggccatgattattgcacgattgtatgaatctgattat
gaaacttcctctacttgtaaatctatcctctatgagaaggttcttggctgtaagccaggt
gggtctgagtttgcaccaagtaaactgcacccagatccattcctgcggagtattgcatat
tggacaatgaaagattattccaatgcattggacacattgctagaacagcctacaaaaagt
accgaagaacatccaggaattctcataaagtcttgcaatccagcagtcttcagtttttac
aactatctccgtgcacatccactactaatgagaagacattttgctcctcctgaagggtca
ttagctactttaggacttgcaaaggagaaaatcagtgaagatgaaattaacctcattgag
aggaaattatttttcaccacggcaaatgctcattttaaagttggttgcccagtcttggct
cttgaggtactgtctaaaatccccagagtcatgaagaaatcaaagccatccttgacaact
gaaagctctagtacgagtgaccaagacaaaaatggtgcagtagaaaacaaaagaagcact
ataggtgcaaactggccacagacttcatcaggcttggaatgggaaaccagtaattctgct
gggattgactggagtgcaccagtagtgacattttctgatgagcccctaaaacttgaatgg
gataatgacttagaagatgactatgaagaggaagaggcaggtggtttgaatatgaaagat
gcagaaatggttaaagaaactaacattgagaaaggagtacctcaagagttccagtcagtt
ccaagagaggattccacttctaatgactctcgagttgatgtaatagcagaacagctaaaa
ttcagagcctgcttgaaaattctaatgactgaacttaggacattagctacaggatatgaa
gtagatggagggaagctccgatttcaactctacaactggttagaaaaagaaattcatgcg
atgcatcaaatctgcaattataaaactgaagtgaaagatgtggttgttgaaataaataaa
aagatcagtgattcatttgaccaagatgaagtaactgagagtatagaagcagcttcatat
gaaaggcatcagattgatcggaggcggctccaagcaaaacaagaacatgcagaaaggagg
aaatggtggttgcggagaaatcaagctctgctgagagtctttcttagctactgcagcttg
catggagctcagggtggtggcttagcttcagtcagaatggaacttgtcttccttttacaa
gaatctcagcaggaaaccactgtgaaacagcttcagtcccctcttcctttacctacgact
ttgcccctcctttctgcagccattgcttcaacgaaaactgtgatagccaatcccatcatg
catttgagtaatcacatccatgatatcttgtacacagtggtacagatgaattgtccacct
cttccaggacttaaggatgatacggtttttattctgcacacttcagcagcttcactctcg
gcctgcatttaccaatctctttgtgacagccacagctacagtcaaacagccacaaacctg
tttacagggatggtttatcaggggctcctattgggagaaagacgtagactacggacagaa
agcattgaagagcatgtaactcctaattcttcaccttcacattggcctggtgtttcatca
ctgattaatcttctcggatctgttcaggaagatgatcaacccaaactgaatgtgttgctt
tgcgaggcagtgattggtgtttacctgagtcttttgattcatggtcttgctactcaggat
agtaatgagctctttcgtttagttgctcatccactcaataatcgaacctgggctgcagta
tttggaggaggtgcaaaaactataataaaacctaaaaagcggccagaaattactccaggt
ataccaaatgtttcagctgtattgaatttggagcaaaatactgccttgaagacagaaatt
ctagacgtgtctgtgtctcccagctgtgagactggaacacgacacacaccagaactggat
gttcctccggaagacattgatcgatatcgccggagatttaacatgaagatgttagttcct
ggtagacctgtaaaggagacttcaacaccaccacctgtacctgtagatcgaccttcatac
aaagaaaaattcattccacctgaacttagtatgtgggattattttgtagccaagccattc
atgcctccatccgagagtggatttatgtatgattcagatgaaagtatccctagtgacgat
gacgatgacgatgatgcttttatttctgacattcagttgcaagaacattctgatcctaat
tcatacagttgggctctgatacgtctaggaatggttaagcttgcactgaacaatgtgaaa
aacttctttcctgttgcaggattggattttgcagatcttcctgtaacttctcctttgggt
aatgctgttatgaaaactttggaaaactggcagcagatacttcaggcaaaaatggaacag
tttgaaggcccacctccaaactacatcaacacgtatcccaatgatttctctaatgttggt
ggaccagctattctgcgacacaaagcaatgcttgaaccagaaaacactccattcaagtca
aggcattattccacattccctgttaaaaggctgtggtacttcctggtcaaacaagaagtt
ctgcaagatgcatttataagatttatattcacaaagaaaagaaagcaaagtgagtcagta
gaagaccatgtggagcaagtcaaacaaaactacgtcagggaacatcgtggaagcaacaag
gttgaagcagatatgggataccctggtggaaaatcaaagattattcataaagattctgat
gccatcatggcatttgcaattaataaggcaaattccaatgagatagttctggcttcaaca
catgatgtgcaagaacttgatatatctgcaattctagctgctcagccttttacctggatt
ggtgaagattcagacagagattcgagaagttctgacgatcttgagcatcgctcagtggga
agcagcagccaaacaagtacaactcattttgcatccagccagctttctagttcatcttcg
atgccttggctaggaagtggacaaaccagcacaggagccaccatgatcataaagagaaac
ttgaataacgtgaagaggatgacttctcatccagctcaccgatattatcttacaggtgcg
caagatggaagtgtccgaatgtttgaatggaatcggccgcagcaagttatatgtttccgg
caagctggcaatgccagggttacccgactttattttaatacccaaggcaataagttgggg
gtggcagatggtgaaggatttctcagcctttggcaagtcaaccaaactggatctaatccc
aaaccttaccttagctggcagtgccacagtaaagctgctggtgactttgcattcgttact
tcttcgagcctcataaccactgcgggccagtccaatgacagcagaaatgtttgcctttgg
gatacactaatttcgccacataacagccttgtgcatggctttgtctgccatgaaaatggt
gccacagtgcttcaatatgcaccaaagcagcaacttcttatctctgggggcaggaagggc
tttgtctgcatttttgacataaggcagagacagttgttacacacatttcaggcacatgat
tctgctattaaggcacttgctttggactccgcagaagattatttcattacaggatcagca
gaggggaatatgaaggtatggaggttaacaagtcatggattaattcattcatttactaac
gaacatgccaaacagtcaatctttcgcaatattggtgcaggaattgtacagctggaaatc
cggccagacaatcgtatcttttcctgtggagcagatggaactttgaagacgcgagttttg
ccagattatttaaatatcccaagtggaatatttgacagcttgtag
DBGET
integrated database retrieval system
