Hemitrygon akajei (red stingray): 140719008
Help
Entry
140719008 CDS
T11019
Name
(RefSeq) guanylate-binding protein 1-like isoform X1
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
140719008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
140719008
NCBI-ProteinID:
XP_072889419
LinkDB
All DBs
Position
31:complement(29320901..29352675)
Genome browser
AA seq
599 aa
AA seq
DB search
MSVTEDPTATKQKMEEPLQLVYNIDEKLVLNRDALKVLQSIDDPMLVVAMVGAARTGKSY
LLNCLAGEKMGFSVDSTVQSHTKGIWMWFRTLPQRPNEVLLLLDTEGLGDPEKGDIDNDH
SIYSLAILLSSIFIYNGQKNIDQQSLQDLHFVTELSKRIQMKSKPDDSDSWDFVRFFPEF
VWLIRDMTLTMTIDGTPVTPNEYLEYSLKLKNSEIRKQDKEYNELRRCIRNHFPSRCCFA
FPFPTHPNNVRQLQELEDKDLDEGFVKERKNFINYIHTHTKVKRVVGGQLVTGRRFVELA
KAYVGMMADGVLPCVESSVAKLVEVENKAAADDALKFYDDSMKEFSESNCYSVRKLIELY
NKRSSEALDMFQKRSMNNNSDQHIEQLEEKMSSTYNSVMVNMKKRSQEECETLLKKVMSS
IKKNLTSRHYLRPGGFQKLQKDLDKAIKEYKEKTMNQTEWCAVLTHFLEEEKHNFDHIQE
MDSKLKDKQMRISAVKEELSRLIHEKLKMEQERNAAEERRNKEIMDQIRKRFEDGKKCSA
DELMEAMEHMSSEMKKYEVEGRKEDAERAQQRYEYLKKKYEEATKWSFMKFGRRLLQIF
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaaccgaggaccctactgccaccaaacagaagatggaggaacccttgcagctg
gtttacaacatagatgagaagctggtacttaaccgagatgctctgaaggtcctccagtcc
atcgacgatccaatgcttgttgtggctatggttggtgctgcacgtacagggaagtcctac
ctcctgaactgtctcgcgggagaaaagatgggattctccgtggattcaactgtccagtct
cacaccaaaggaatctggatgtggtttcgaaccctccctcagagacccaatgaagtcctc
ctgttgttggacaccgagggtctgggagatcctgagaagggagacatcgacaatgatcat
tccatctattcactggctatccttctgagcagcatcttcatttacaatggtcaaaaaaac
atagaccagcaatccctgcaagacctacattttgtaactgaactgtcgaagcggatccag
atgaagtccaagcctgatgactctgacagttgggattttgtccgtttcttccctgaattt
gtctggttgattcgtgatatgactctgacaatgacgatcgatggaacacctgtgactcca
aatgagtacctcgaatacagtctgaaattgaagaacagtgagatcagaaagcaggacaag
gaatataatgaactccgcaggtgtatccgcaatcattttccctcacgttgctgctttgca
tttccctttcccacacacccaaataatgtcaggcagctccaggaattggaggacaaggat
ctggatgagggttttgtcaaggagcggaagaacttcatcaattacattcacacccacacg
aaagtcaagagagttgttgggggtcagctggtcacgggcaggagatttgttgaattggcc
aaggcgtacgtgggcatgatggcagatggggtcctaccatgtgtggagagcagtgtcgcc
aaattagtggaggtggaaaataaagcagcagcagatgatgccctgaaattctatgatgat
tcaatgaaagaattctcagaatctaattgttattctgtgagaaaactcatagaactatac
aataagaggagttcagaagcactcgatatgttccagaaaagatctatgaacaacaacagt
gaccaacacatcgaacagctggaggagaagatgagttctacctacaattctgtcatggtc
aacatgaagaaaaggtcacaagaggaatgtgagacacttctaaaaaaagtaatgtcatca
attaaaaaaaacctgacatctagacattacctgagacctggtggttttcagaagcttcag
aaggatcttgataaggccatcaaggagtataaagaaaagactatgaatcagacggagtgg
tgcgctgtcctcacccatttcctggaagaggaaaaacataatttcgaccatattcaggaa
atggacagcaagctgaaagataaacaaatgcgtatctctgctgtcaaagaggagctctca
aggctgatacatgagaaactgaagatggagcaggagaggaatgcagctgaggaacgcaga
aataaagagatcatggatcagatcaggaaaaggtttgaggatggtaaaaagtgcagcgcg
gatgagctgatggaagctatggagcatatgagcagtgagatgaagaaatacgaagttgaa
ggcaggaaggaggatgcagaaagagctcagcagaggtatgagtacctgaaaaagaaatat
gaagaggcaacaaaatggagtttcatgaaattcggaaggagactgctgcaaatattttag
DBGET
integrated database retrieval system
