Hemitrygon akajei (red stingray): 140719024
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Entry
140719024 CDS
T11019
Symbol
srcap
Name
(RefSeq) helicase SRCAP
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140719024 (srcap)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
haka03036
]
140719024 (srcap)
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
140719024 (srcap)
SWR1 complex
140719024 (srcap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
140719024
NCBI-ProteinID:
XP_072889461
LinkDB
All DBs
Position
31:complement(2521962..2606749)
Genome browser
AA seq
2600 aa
AA seq
DB search
MQSSPALQYNAHHRQVTQNKERMTGSSPILPTSSSSSSSSSSSSSSSSSSCSSSSSSSSA
SSSSSSSSSSPASSAGASPAHPGCLANDSLDGLGSLRGHGRVSLSPGLWEPSQAHQAGKG
QAWDKTQAEIAEQAKHEAKIEHRIAELRREGLWSLRRLNRVTEPSRPKAQWDYLCEEMQW
LSADFSQERRWKRGVARKVARTVLRFHEDLRQKEERAKREEQAKLRRIASNVAKEVKQFW
ANVEKVVQFKQQSRLEERRKKALDLQLDFIVGQTEKYSDLLSQSLQESLPTSKPGSSLLG
SSLAGSGASSPPASGSATEDEDFEPQEEEDDEETIEVEERRAGNDTEARRREIELLRRES
ELPLEEVLRSLPVATTTCGQATSEDGCWSSSEEEEEEEEERRPPRTRENNRRCSTGRRPR
RRSSQELDDEEFKADHEEDEDDEWTIDAEEELAGDVDHTAELDELARESELPVADLLRKY
GRAFTEPFEALDSPSEGTSDSEEDGEDTTSEYEESSHSSDSDDLTASEDEEEEEEDEEDE
EEQEIGVEYLLQDGLEDEELNREPTPSRGPKKEITDIAAAAESLQPKGYTLATTQVKTPV
PSLLRGTLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIALLSHLATEKGNWGPH
LIIVPTSVMLNWEMEFKRWCPSFKILTYYGVQKERKLKRQGWTKPNAFHVCITSYKLVLQ
DHQAFRRKNWKYMILDEAQNIKNFKSQRWQSLLKFNSQRRLLLTGTPLQNSLMELWSLMH
FLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNENLVKRLHKVLRPFLLRRIKVDVEKQMP
KKYEHVVQCRLSKRQRYLYDDFMSQASTKETLESGHFMSVINILMQLRKVCNHPNLFDPR
PIHSPFITEGICYTTASCVLRALEYQPFKQVDLGMFDLINLEGRLSRYESETFLPNHKVS
LKLIEEVADGPDPPPRPRPVRMKVNRMLQPAQKPDGRTVVLVNSPRPPLPVPQNSPQTPV
QVRPPEVLQTMQSTVPLHPIVSPTTQVVTASPGMPSPLSLPQVVTPPRTPVLGAALQPPP
PSVSLGVGVRPVPVQALRVAPAMRGPQSLAGYTVQAGASGPLPQRLILSPDMQARLPTGE
VVSIGQLASLSSRQQPVPTPGSKPLTFQIQGNKLTLAGTPLRPLGTAPPRQLQGNVVHLV
SGGTHHLVGQPAQLALIQAMAQPSGQPTLQAVSVPHPAVSSAPARLSVPLNATPVPGSVV
TSSGVVKIVVRQAPKDCLPLPLPQPRPLPIPATRLQPATRLQPATPIPSTRVQLPLGNPP
PGLAHRPVLRVVQAPPVTTEQAAPTVTRLVVSGAGPAEKEDTELPTLRPVCAAPPAPAQP
IASTSLAALRPRRQVAQLAKSPYRLESLEQKRLQHRKERLERIHALNERRCSTCPVYGTE
LLRLCNLSTHGPPPPAPTEEGSGGADRWRGLGYAHCLAAQTGQEKRGPEAYWRTTPALDR
AVRNPEERIEQLGDVIDRFIFVIPPVEAPPIRMHVSHPPPSDHHRQLLLAETLHQQLAPR
TARLHRIICNMRTQFPDLRLIQYDCGKLQVLDPLLRRLKAEGHRVLLFTQMTRMLDVLEQ
FLNFHGHIYLRLDGSTRVEQRQILMDRFNADKRIFCFILSTRSGGVGVNLTGADTVLFYD
SDWNPTMDAQAQDRCHRIGQTRDVHIYRLISDRTVEENILKKANQKRMLGDLAIEGGNFT
TAFFKEQTIRELFDVPTEEPQKEPELPLPPPLPPPPPTPRPEEEDSVSAKQTQILEQVLG
RAEDEEDMRAASLAKAEQVADLAEFNESIPLEGEEGSAREEEEELSKAEQEIAALMEQLT
PIERYAMNYLEATLEDVSREELKQAEEQVEAARKDLHQAQDESWSWGDGEEEPLPSEEPT
NRRPRRSRPQPPPRPSTRLSRRLRGCRVPDGEGEEVALALPPPPPPPPPLPPPLPFEASA
TRDLHIHISSELPEQIFAEEAGSEVWGADGVRPGPCTPTPVSDGSHPTETGATEMRESGT
VQGQVETATETRLGQKEMEEIETVPGQVETATETRLGQTETVPEPRETGQTELGQAKTER
VPGRVETGPKEAETLTGQMEAESAPADGQPEGQALSVPVAMGETSVTEEPAVEGQRLQDS
PSLVTTDAAGQRSHERKPVALHTMDAEHRRSGEGELQSSVSMDAEVRSSREGEQKESIPV
DTARGSGDVDPQPLVTKDTEGQRLGGDDPGSSVTVDTEGQKSGEGDPGTLVTVNTAVQRL
EKNDPGILVATEMDHQRLREGNQETLVNMEAEGQRSRPTSPQVLDATEGEDEEEEEDKEV
VPPPCPPVKRRRRTADQALVREGLPASEGAQLSATVLRRVPGRINVIVRRPEPRPVKAKR
VRLSPEVEQGKAEEASSGPPPPAPTHRSTRQRPGDLLPPLERRRYRPRGRQAVRSPPSLP
QPTTLPPPPSLPPPTPLSPPAPLPTPPPPAPSRKRGRPISSHSPGPPPKVRIPGRRGRPP
KNPQLRISSLPFTPPPPPPPPPPPPSPPPPPQPRRGRPPGRKSRGRARPSMHRPPPPPPP
LPRRRGRPPSVNRRGRRPKA
NT seq
7803 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagtcctgccctgcagtacaacgcacaccacagacaggtcacacagaacaag
gagagaatgactggtagcagccccatcttgcccacctcctcctcctcctcctcttcctct
tcctcctcttcttcctcttcctcctcatcttgctcctcctcctcctcttcctcctctgcc
tcctcgtcatcctcctcttcctcctcctctccagcctccagcgcaggagcctctccagcc
caccctggctgcctggccaacgactccctggacgggctgggctcgctgagggggcatggc
cgggtatcgctgagccctgggctctgggagcccagccaggcacaccaggccggcaagggc
caagcctgggacaagacacaggctgagatcgctgagcaggccaagcacgaggctaagatc
gagcaccggattgctgaattgcgtcgggagggtctgtggtctctgaggcggctgaaccgt
gtgacggagcccagccgtccgaaggcccagtgggactacctgtgcgaggagatgcagtgg
ctgtcagctgacttctctcaggagcggcgttggaagagaggtgtggcgaggaaggtggca
aggacagttctgcgattccatgaggacctgcggcagaaggaagagagggccaaaagggaa
gagcaggccaaactccgccgcattgcctccaatgtcgccaaggaggtcaaacagttctgg
gccaacgtagagaaggtggtccagttcaagcaacagtcacgcctggaagagcggcggaag
aaggcccttgacctgcagcttgacttcatcgtggggcagactgagaaatattcggaccta
ctaagccagagtttgcaggagtccttgcctaccagcaagcccggctcttctctgctcggc
tcgtccttggctgggtccggagcctccagccccccggcatctggctctgccacggaggac
gaagatttcgagccacaggaagaggaggacgatgaggagaccattgaggtggaggagaga
cgtgcaggtaacgacactgaggcccggcgccgggagattgagttgctgcggagggagagc
gagctgccgctggaagaggtgttgcgctccctgccggtggccaccaccacctgcgggcag
gcaaccagtgaagatggctgctggagctcctcggaggaggaggaggaggaggaagaagag
agaaggccacccaggacacgggagaacaaccggcgatgttcaactggcaggcggccgagg
cggaggtcttcccaggagctggatgatgaggaatttaaagctgaccatgaggaagatgag
gatgatgagtggacgattgatgcggaggaggagctggcaggagatgtggaccacacagcc
gagctggacgaactggccagagaaagtgaattgcccgttgctgatctgctgcgcaagtat
ggccgagctttcacggagccttttgaggcactggactccccctctgagggcacctctgac
tcagaggaagatggcgaggataccacatctgagtatgaggagagcagccattcttctgat
tctgacgacttgacggcatcagaggatgaggaggaggaggaggaggatgaagaggatgag
gaggagcaagagattggtgttgagtacctgctgcaagacggcttagaagatgaggagctg
aaccgggagccgacaccttccaggggccccaagaaggaaatcacagacattgcagctgca
gctgagagccttcagcccaagggctacaccctggccaccacccaggtgaagacaccggtg
ccctccctgcttcgtgggacgctgcgggagtaccagcacatcggcctggactggctggtc
accatgtatgagaagaagctgaatggcatcctggctgatgagatggggctgggcaagacc
atccagaccattgccctgctttcccacctggctacagagaaggggaactggggccctcat
ctcatcatcgtgcccaccagtgtaatgctgaactgggagatggaattcaagaggtggtgt
ccctccttcaagatcctcacctactatggcgtgcagaaggagcgcaaactgaagcggcag
ggctggaccaaacccaatgctttccatgtctgtatcacctcctacaagctggtgctccaa
gaccaccaggccttccgccgcaagaactggaagtatatgatcttggacgaagcgcagaac
attaagaactttaagtcgcagcgctggcagtccctgctcaagtttaacagccagaggcgc
ctgctgctaacaggaactccgctacagaacagcctaatggaactgtggtcgcttatgcac
ttcctgatgccacacgtcttccagtcccaccgtgagttcaaggagtggttttccaacccg
ctcactggcatgatcgagggcagccaggagtacaatgagaacctggtcaagaggctgcac
aaggtcctgcggccgtttctcctgcgcaggattaaggtggacgtggagaagcagatgcca
aagaagtatgagcacgtggtgcaatgccgcttgtcaaaacgacagcggtacctgtatgat
gacttcatgtctcaggcctccaccaaagagactctggagagtggccacttcatgagtgtg
atcaacatcctgatgcagttgcgaaaagtttgcaaccaccccaatctttttgacccacgc
cccatccactcgccctttatcactgagggcatctgttacaccactgcctcctgcgtgctc
cgggcacttgagtaccagcctttcaagcaagtggacctaggcatgtttgacctgatcaac
ttggagggccgtctctccaggtacgagtcggaaaccttcctccccaaccacaaggtctct
ctgaagctgatcgaagaggttgccgatggaccggacccacctccacgaccccgtcctgta
cgaatgaaggtgaacaggatgctgcaacctgcacagaagccggacgggcggacggttgtc
ctggtcaacagtccacggccaccgctgccggtaccccagaactcaccgcagactccggtg
caagtacgtcctcctgaggttcttcagaccatgcagagcacagtccctctccaccccatt
gtcagtccgaccacacaggttgttactgcttcaccaggaatgccgtctccactctccctc
cctcaggtggtgacacccccacgaacccccgtgctgggggccgctcttcagccaccccct
ccctcagttagtctgggggtgggggtgaggccggtgcctgtacaggcattgagggtggcc
ccggccatgcgtggcccccagtccctggccggatacacagtgcaggcaggggcaagtgga
cccctccctcagcgcctcatcctctctcccgacatgcaggcccgactgcccacgggagag
gtggtcagtatcgggcaactggcatcactgagcagccgtcagcagccggtccccaccccg
ggcagtaaacctctcaccttccagatccagggcaacaagctgacgctggctgggaccccc
ctccggcctctggggaccgcaccaccccggcagctgcaagggaacgtggtccacctggta
tctggtgggacccaccacctcgtgggacagcccgctcagctggccctgatccaggccatg
gcccagccaagtggtcagcccacactgcaagccgtgtctgttccccaccccgctgtctcc
tctgctccagctcgtctcagtgtcccactcaacgccaccccagtgcccggctctgtggtg
accagctctggcgtagtaaagatcgtggtgcgtcaagcgcccaaggattgcctcccgctg
ccccttcctcagcctcggccactgcccatccctgctacccgtctgcagcccgccacccgc
ctgcagccggccacccccatcccatcaacccgggtccagctgccccttggcaacccccca
cctggtcttgcccatcgccctgtactgcgtgtggtccaggctccccccgtcactactgag
caagctgctcccaccgtgacacggctggtggtttctggggctggcccggcagagaaggaa
gacacagagctgcccaccctacggccagtgtgtgccgcaccccctgcccccgcccagccg
atcgcatctacctcactggcggcgctgagaccaaggcgacaggtggcccagctcgccaag
tctccctaccgactggagtcgcttgaacagaagaggctccagcatcggaaagaacgactg
gagcgaatccacgcactgaatgagcgccgctgctccacgtgtcctgtctatggcaccgag
ctcctgcggctctgcaatctttccacccacgggccccctcctccagccccgaccgaggag
gggagtggtggggcggatcgctggcggggactgggctacgcccactgtctggcagcacaa
acagggcaggaaaagcggggtcctgaggcgtactggaggaccacgccagcgctggacaga
gctgtacgcaaccccgaggagaggatcgagcaactgggggacgtcatcgataggttcatc
ttcgttatacctcccgtggaggccccacccatccggatgcacgtctcccaccctcccccc
tcagaccatcaccggcagctgcttcttgctgagaccctgcaccagcagctcgcccctcgg
actgctcggcttcaccgcatcatctgcaacatgaggacgcagttccccgacctccgtctt
attcagtacgactgcgggaagctgcaggtcctggaccccctgctgcgacggctgaaggcc
gagggacaccgggtgcttctcttcacccagatgacgcgcatgctggacgtgctggagcag
ttcctcaacttccatggccacatctacctacggctcgatggcagcaccagggtggagcag
cgccagatcctaatggaccgcttcaatgccgacaagcgcatcttctgcttcatcctctcc
acgcggagtggcggggtgggggtgaatctgaccggggcggacactgtgcttttctacgac
agtgactggaaccccaccatggatgcccaggcccaggatcggtgtcaccgcatcggccag
accagagatgtccatatctacaggctgattagtgaccgtaccgtggaggagaacatcctg
aagaaggccaaccagaagcggatgctgggggacctagccatcgaagggggcaactttacc
actgccttcttcaaggagcaaaccatccgagaactgtttgacgtcccgacagaagagccc
cagaaggagccagagttgcctctgccacctcctcttcccccaccgccccccactccccgg
ccagaagaggaggactctgtttcggccaagcaaacgcaaatcctggaacaggtactgggc
agggcagaggatgaggaggacatgcgtgcggcttcgctagccaaagcggaacaggtggcg
gacctggccgagttcaatgagagcatccctctggagggtgaggagggatcagcccgcgaa
gaagaggaagagttgtccaaggccgagcaggagattgccgccctgatggagcagctcacc
cccatcgagcgctacgccatgaactacctggaagccacgctggaagatgttagcagggag
gagttgaagcaggcagaggagcaggtggaggctgcccggaaggacttgcaccaggctcag
gatgagagctggagctggggggatggcgaagaggagcccctcccgtctgaggagccaacc
aaccggcgtccgaggaggtcccgtccccagccacctccccgccccagcactcgtctaagc
aggcgactgcgtggatgccgtgttcctgatggggagggcgaagaggttgcactggcactg
cctccaccaccacctccccctccgcccctccctccacccctgccttttgaggcctccgct
actcgtgacctgcacatccacatcagcagtgagctccctgagcagatcttcgctgaggag
gccgggtcggaggtttggggggctgatggggtccggcctggcccctgcacaccaacccct
gtgtctgatggttctcaccccacagagacgggagctacagagatgagagagtcagggaca
gtccagggacaggtagagacagcgactgagaccagactgggacagaaggagatggaagag
atagagacagtcccgggacaagtagaaacagcgactgagaccagactgggacagactgag
acggtcccagaacctagggagaccggacagacagagttgggacaggcaaagacagagaga
gttccaggacgggtggagacaggaccgaaagaggcagaaacgctcactggccaaatggaa
gcagagtctgcccctgcagatggtcagccagagggccaagctttgagtgttcctgttgcc
atgggtgagacgtcagtaaccgaggagccagcagtagaggggcagaggttgcaagacagc
ccctctctagttaccacggacgcagcaggccaaaggtcacatgagcgcaaaccggtggca
ttgcataccatggacgcagagcatcgaagatcaggagagggcgaactgcaatcatcggtt
agcatggatgcagaggttcgaagttcaagagagggtgagcaaaaggaatcaattcctgtg
gatacggctcgaggatcgggtgatgttgatccacagccattggttaccaaggacacagag
ggtcaaaggttgggaggggatgacccaggttcatcagttactgtggacactgagggtcaa
aagtcgggagagggtgacccagggacattggtaacagtgaacacagcagttcaaaggttg
gaaaagaacgacccagggatattggttgccacagagatggaccatcaaaggttgagagaa
ggcaaccaagagacattggtcaacatggaggcagagggtcagaggtcgaggcccaccagt
ccacaagttctggatgctacagagggtgaagatgaagaggaggaggaggacaaagaggtt
gtaccacctccctgtcctccagtcaagcggaggcgccggacagctgaccaggccctagtg
agggaggggctgccggctagtgagggggcccaactctcggccaccgtcctgcgccgggtc
cctggccgaatcaatgtcattgtccggcggcctgagccacgccccgtcaaagctaagcgc
gtccgcctctccccagaggtggaacaaggaaaggcggaggaggcttcctcgggtcctcca
ccaccagcccccacccatcggtctacacggcagcgccctggtgacctcttgccaccccta
gagaggcgtcgctacaggcctcgaggtcgtcaagctgtccgctctcctccctctcttccc
cagccaaccactcttccccctcctccctctcttcccccgccaacccctctttcccctcca
gcccctcttcccaccccaccccctccagcgccatccaggaagaggggccgccccatctcc
tcccactctccaggtcccccacccaaagtccggatccctggccgaagggggcgacctccc
aagaatccccaactccgcatctcatccctaccctttaccccccctccccctcctcctcct
ccgcctccaccaccatcgccgcctcctcccccccaaccccgccggggaaggccacctggg
agaaagtctcgaggcagagctcgtccctccatgcatcgtccccctcctcctccgccccct
ctcccgcgccgcaggggaagacccccctctgtcaaccggaggggccgccggcccaaggcc
taa
DBGET
integrated database retrieval system
