Hemitrygon akajei (red stingray): 140719392
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Entry
140719392 CDS
T11019
Symbol
sox10
Name
(RefSeq) transcription factor SOX-10 isoform X1
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haka03000
]
140719392 (sox10)
Transcription factors [BR:
haka03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
140719392 (sox10)
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Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
140719392
NCBI-ProteinID:
XP_072890109
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All DBs
Position
31:9257547..9298429
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AA seq
451 aa
AA seq
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MTDDRSVSDVASPRGSESDSVLSPSSSFAADGEEKSQYQACNEEGSGKRESEEDKFPLCI
REAVSQVLEGYDWTLVPMPVRVNGSSKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNA
ELSKTLGKLWRLLNENDKRPFVEEAERLRSQHKKDHPDYKYQPRRRKNMKPGQGDADAHP
EDGHISSVQPHYKAVPQDRGRTTGSSPLAEGHGEHTGQSHGPPTPPTTPKTEMQPGKAEG
KREGRPLVEGGKPHIDFSNMDIGDLSHDVMSNMETFDVHEFDQYLPPNGHPSHGQALGAG
AYGANYGLGGALAGGHSAWISKQHASGSAPSGPAAASAESKTQIKTEQSHPSHYSEQQHS
SAQITYTSLSLPHYGTAFPSITRSQFDYPEHQATGPYYSPSAQTSGLYTAFSYMGASQRP
LYTSISDPQSVPQSRSPTHWEQPVYTTLTRP
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgacggatgatcgcagtgtgtcagacgtggctagcccgagagggtctgagagtgactcg
gttctgtctcccagctcatcctttgctgccgatggggaagagaagtcacagtatcaggct
tgcaacgaggaagggagtgggaagcgagagagcgaggaagacaagttccccctatgcatc
agagaggctgtgagccaagtcttggaaggctacgactggactctggttcccatgcctgtt
agagtcaacggatcctccaagagcaagcctcatgtgaagagacccatgaatgccttcatg
gtatgggctcaggcagcacggagaaagttggcagaccagtacccacatctgcacaatgca
gagctcagcaaaacactaggcaaactctggaggttactcaacgagaatgacaagaggccc
tttgtggaagaggctgagagactgcgatcgcagcacaagaaggaccaccctgactacaag
taccagccccgccggcggaaaaacatgaagcctgggcaaggtgatgccgatgctcaccca
gaggatggccacatctcctctgtccagccccactacaaggctgtgcctcaggatcgtggg
cgcacaactgggagctctccacttgcagagggtcatggtgagcacacagggcagagccat
ggccccccaactccccccaccaccccaaagacagagatgcagcccggaaaagcggagggg
aaacgggaaggacgcccactggtcgaaggaggcaagccgcacatagatttcagcaacatg
gacattggggacctcagccacgacgttatgtccaacatggagaccttcgatgtccatgaa
tttgaccagtacctgccacccaacgggcatcccagccacgggcaagccctgggcgccggg
gcctacggtgcaaactacgggctcggaggggcactggctggtggacattccgcctggatc
tccaagcaacacgccagtggctctgccccgtcgggcccagccgccgcctcagccgagtcc
aagacccagatcaagactgagcagtcccacccgagccactactcggaacagcagcactcc
tcggcgcagatcacttacacctccctcagcctcccacactacggcacggccttccccagc
atcaccaggtcccagttcgactaccccgagcaccaggccaccgggccttactacagcccg
tccgcccagacctctggactctacaccgccttctcttacatgggcgcctcgcagcgcccg
ctctacacctccatcagcgacccgcagtcggtgccccagtcccgcagccctacccactgg
gagcagcctgtctacacgacgctcacccgcccataa
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