Hemitrygon akajei (red stingray): 140719395
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Entry
140719395 CDS
T11019
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
KO
K13175
THO complex subunit 6
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03013
Nucleocytoplasmic transport
haka03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140719395 (thoc6)
09122 Translation
03013 Nucleocytoplasmic transport
140719395 (thoc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haka03019
]
140719395 (thoc6)
03041 Spliceosome [BR:
haka03041
]
140719395 (thoc6)
Messenger RNA biogenesis [BR:
haka03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
140719395 (thoc6)
Spliceosome [BR:
haka03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
140719395 (thoc6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WDR55
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_NOL10_N
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_Gbeta
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
NBCH_WD40
EIF3I
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_IP5PC_F
DSE1_N
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_ACSF4
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
ASA1
Beta-prop_DCAF4
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
140719395
NCBI-ProteinID:
XP_072890118
LinkDB
All DBs
Position
31:complement(21518831..21534959)
Genome browser
AA seq
330 aa
AA seq
DB search
MPGAGSSGERRRACAPVMAAVVNVAEVQHRLELLHLTVFSLSFSPCGRYLAAGNNYGQIG
IFSLSAALSIEATEENQKPIFIFQAHEGPVYSLVSTSRHLLSSGTGDVKAWNWNDLIKKS
CKEVWCRRPAFGTRLDIPEINSLILNQEDNSLLMACGDNTVYIMDLEHGAFTRTLKGHSD
YVHCLTLRDPNECISGSEDGSVRLWDLRIASQVQMIEPHKYEQCSRPQYGKWIGCLTTTD
SDWMVCGGGPALTLWHLRSVTPTTVYQLQGCQQQVTLHQDLILAAGGRRPHQPLSDHRGG
EEPGALHSPHRLLPVGQRAVPRAQGPGCCW
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcgccggttcgagcggagagcggcggcgcgcatgcgctccggtgatggcggca
gtggtaaatgttgcagaggttcagcaccggctggagctgctgcatttgaccgtcttctcc
ctcagcttctcaccttgtggtcggtacctggccgctggcaacaactatgggcagattgga
atcttcagcctctcagccgccctgagtatagaagcaacagaagaaaatcagaaacctatc
ttcatattccaagctcacgaaggccctgtgtacagcctggtctccaccagccgccacctg
ctaagctctggaacaggagatgtcaaggcctggaactggaatgacctcatcaaaaagagc
tgcaaggaagtttggtgtcgacgacctgcatttgggacacgtttggacatcccagagata
aacagcttgattctcaaccaagaggacaacagtctgctaatggcctgtggtgacaacact
gtctatatcatggacctggagcacggggccttcacgcgcacgttgaagggacacagcgac
tacgtccactgcctgaccctgagagaccccaacgagtgcatctccggcagcgaggatggt
tcagtgagactctgggatttacggattgccagccaggtgcagatgatcgagcctcacaag
tacgagcagtgctccagaccccaatacggcaagtggatcggctgcctgaccaccaccgac
tccgactggatggtgtgtggtggtgggccggcactgacactgtggcaccttcgctccgtg
acgccaaccacagtgtaccagctgcagggatgccagcaacaggtcaccctccatcaggac
ctgatcctggcagcggggggaaggaggcctcatcagccactgtcagatcaccggggaggt
gaagagccaggtgccctgcactccccccaccgtctactccctgttggtcaacgagcagtc
cctcgagcacaaggtcctggctgctgctggtag
DBGET
integrated database retrieval system
