KEGG   Hemitrygon akajei (red stingray): 140719497
Entry
140719497         CDS       T11019                                 
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein-like isoform X1
  KO
K18412  trinucleotide repeat-containing gene 6 protein
Organism
haka  Hemitrygon akajei (red stingray)
Brite
Messenger RNA biogenesis [BR:haka03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     140719497
Chromosome and associated proteins [BR:haka03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    140719497
SSDB
Motif
Pfam: TNRC6-PABC_bdg Ago_hook RRM_occluded RRM_1
Other DBs
NCBI-GeneID: 140719497
NCBI-ProteinID: XP_072890315
LinkDB
Position
31:complement(9339417..9536229)
AA seq 1870 aa
MQVNDGSRHQEANPKTLKEMEKMTEELHIQAKEHNANTEVQTEREDFSSDEHRDTSESPS
EESKQEKEEEKEEQLMEEKKRKKEDKKKKDATQKVTEQKTKVPEATKPSLSQPPTATSVG
SVPTPAGNGGNNAKRAVATNGQPQNAARYLPREVPPRFRQQEHKVLLKRGQPPPPSCGLL
GGGAGPPGLPGSNPGTAQPNGPLQHGSTPVDTNPGGAGSNYANSPWGSGSSSTDLNHGWD
KLIVDGSDMEAWPCITGRDSESASEHIDNEGASNLGSEKSQPPGSGAARSCKGAANQFAA
GGGKNECKMGAWNMGLVPKPSHASSISSESKDGLNNWKNLSSPDGAGLGLTLNPNINPSA
WPVLGQEGTSGKGTLETDISSSSAQLSAVGQSPRDQDGTSTSAWAKQSKTENAGVTWNAS
VGEQPQFQALNTDGPNNGDTNSLNASSQSTGNPLQNKGVSETTGNGTWNMPLGMGLGNPL
VLNQSVSTEASSEGSIRGTMEGRAAGGTWNTVWGSSGTDSISGQNGTGADGNNGRSGDDA
AKNGSGVKQLLVNRSRTESWDNNGGSWDPETQDPNKAKNWGKGNRTASGSAQGLWGQQPG
TDNQSEGDWVGSANEQNCGTGGWDNHRVNPLPENQGENAQISNWAKASSSTGSDSGSRSN
NKKGGSDNHPGGRRSNKADHPDQEEVLQTVMNRADLDPRVLSNTGWGQTQIKQNTIWDVQ
ESPRNERRTDKGTEGWESTATQSSNSGGWGEGPSQTSHCTSGWGDAPQSSNIEWKDSKTP
SGWVDPKSSQGWGGGTTEEKAPSWNDGPRIKEPGWGARQQQTQGWPANNGWGDGSGQPAE
QPKSGGWDSSNPRWGESGRGDVGSWGGGSSSNPNQRGGWEDPPRHQGWGEPSKATTSNWS
KQQDVSGSWGTASNSNRQSAPGWGSAPVPMPSSAVPPATIPTLPKEEEPTGWEEPSPQSI
SRKMEIDDGTSAWGDPNSYNYKNVNLWDKNSQNESSGSGPLPREQNASNAVTGRGSTSSS
GSKSMQDGWGGGDRPAVANTRPPSWEEDDDGPMGLWNSTGTQESSSPYNSSNWPASGKKM
HKSSMKGGNNDTWINPLSSQFSKMGLLRESSEDSVGNKMDLTVGGLPDKKLESDKRGMNM
DYNGMMRKDRSGFRPSNSKDSPTTDSGPYFEKLTLPFSNQDGCLSDEAPNSPFSPPPSCK
LSPSGTALPTANLGCIGSGFNMQNLNARHNGNHGLFGSSTAQSRGVHTPQVPSMNSSQPN
LRAQVPPQFLPPPQVPAPMLKHATPNGALNPALFGLGPQLTPQQIAMLSQLPQLPQLAYQ
LLLQQQQQQQQVLQNQRKLSAAVRQQQEQQLVRIVNALQQQQQQQQQHRHNSTPGMKHSP
SHPGMPKQHLDNVPSSLPSGLPDFQTKGQIQPGYPMGMGSNMNVNQLDVNSIVGMKEPQS
QQSRLKQWTTMDGLSPATPPPDHNPMKNGAISSSMAPPVKPRDSLPYYEMIAGDSLASHS
GPASDNWSTPKLSNGSSGSSWPPEFRPGEPWKGFQNIDPESDPYATPASMINSSAAPPSP
DSEHQLLRDRSTGSSSSLNTSLPSPGAWSYSASNSSYSTVQSTSAKFSDFKSTWSPDPIG
HPRMWKNQMSSKNTNPPTRPPPGLTNQKPPSSPWGSGAPRFSRGWGMQESRYALSSNWSD
GNSGGSGRVSSWLVLHNLTPQIDGSTLRTICMQHGPLITFHLNLTHGTALVRYSTKQEAA
KAQTALHMCVLGNTTILAEFVSEEEVNRYFAQGQLSTPSPGWQTLETGQSQMDPVGSSLH
TFGGRASLGQWNSAGGVGRGSGNLVGASLWATPSYTASLWGAPNSDDSHRMGSPAPLLPG
DLLGGGADSI
NT seq 5613 nt   +upstreamnt  +downstreamnt
atgcaggttaatgacgggtcaaggcaccaggaagcaaatcccaagacccttaaggagatg
gagaagatgacagaggaactgcacatacaggcaaaggaacataatgctaacacggaggtt
cagactgaacgagaagatttttcatcagatgagcaccgtgacacatcagaatctccaagt
gaagagagcaagcaagagaaggaagaagaaaaggaagaacagttaatggaagaaaagaaa
aggaaaaaagaggacaagaagaagaaagacgccactcagaaggttacagaacaaaaaacc
aaagtgcccgaagcgacgaagccaagcctaagccagcctccaactgccacctcagttggc
agtgttccaacaccagccggcaacggtggtaacaatgccaaaagggcggtggccaccaac
ggccagccacagaacgccgcccgctatctgccccgtgaggtgcctcctcgatttcgccag
caagagcacaaagtgttactaaaacgtggtcagccccctccgccttcctgtggacttctt
ggaggtggggcggggcctcctgggttgccaggatcaaaccctggcactgcacaacccaac
ggtccactgcagcacggcagtacaccagtggacacaaaccctgggggtgctggttcaaat
tatgcaaattctccttggggttctggatcatccagcactgacctcaaccacggctgggat
aagttaatcgtagacgggtctgatatggaggcttggccttgcatcacaggcagagactct
gagtcggcttcggaacacatagataacgaaggtgcctcaaaccttggctctgagaagagc
cagccacctggaagtggcgctgccaggagttgcaaaggagctgcaaaccagttcgctgct
gggggcggaaagaatgaatgtaaaatgggggcctggaacatgggccttgtgcctaaaccc
agtcacgcatcttccatctcttcggagagcaaagacggacttaacaattggaaaaacttg
agcagccccgatggagctggccttgggttgaccttgaacccaaacatcaacccatcggcc
tggccagtattgggccaggagggcacttctggaaaagggactttggagacggacatttcg
agctccagtgcacaacttagtgcagtaggtcaaagccctagggatcaggatggtacttct
acaagcgcctgggcaaaacagtctaaaacggaaaatgcgggtgttacatggaatgcttct
gttggagaacagcctcaatttcaagctcttaacactgatggaccaaataatggcgacact
aactctttgaatgcaagctcacagagcaccgggaaccctttacaaaataagggagtgtct
gaaacaacagggaatgggacctggaatatgcccttaggaatgggtttgggaaaccccttg
gttttgaatcaatctgtgagcactgaagcctcatccgaaggcagtattagaggaactatg
gagggacgggcagctgggggtacttggaatacagtttgggggtcttctggaactgattcc
atttctggacaaaatggtacaggagctgatggcaataatggacgcagtggtgatgatgca
gcaaagaatggctctggtgtgaaacaattacttgtgaatagatcaagaactgaatcgtgg
gacaataatggtggatcctgggaccctgagacacaagaccccaacaaagcaaaaaactgg
ggtaaagggaacagaacagcatctggtagtgctcagggtttgtggggtcaacagccaggg
actgataatcagtcagaaggagattgggttggctctgctaatgaacagaattgtggcaca
ggcggatgggacaatcacagggtaaatcccctcccagaaaaccaaggagagaatgcccaa
atttccaactgggcaaaagcctctagttccactgggagtgactctggtagtcgaagcaac
aacaaaaaggggggctctgacaaccacccaggaggacggcgctcaaacaaggctgatcat
cctgaccaagaggaagtattacaaactgtaatgaacagggctgatctagacccaagagtg
ctgtcaaatactgggtggggccaaactcagataaagcagaacacaatttgggatgtccag
gagtcacccaggaatgagaggcgcacagacaaaggaactgaagggtgggagagcactgcc
actcagagctctaactcagggggctggggcgaagggcccagtcaaaccagtcactgcacc
tctgggtggggagatgctccgcagtcttcaaacatcgagtggaaggattcaaagactcca
agtggatgggtggacccaaagagcagtcaaggttggggaggtggaacaacagaagaaaaa
gcaccatcttggaatgatgggcctagaatcaaggaaccaggttggggagcaagacagcaa
cagactcaaggatggccggccaataatggctggggtgatggaagtgggcaaccagctgaa
caaccaaaatcaggcggctgggacagttcaaacccgagatggggtgagagtggccgtggt
gatgtaggatcttggggaggtggtagtagttccaatcctaatcaaagaggtgggtgggag
gaccccccaagacaccagggatggggtgagccatccaaagcaaccacttctaactggagc
aaacagcaggatgtgtctggttcttggggcactgcctccaatagtaaccgacagtcagca
ccaggttggggctcagcgcctgtgcccatgccttcttctgctgtcccacctgcaaccatc
ccaactttgccaaaggaggaagaacctactggatgggaagagccttcacctcagtccatc
tcccgaaagatggagattgatgacggcacctcagcctggggtgatcccaacagctacaac
tataagaatgtgaatctgtgggacaaaaactctcaaaatgagagctctggaagtgggccg
ttgcctcgtgagcagaatgcatcaaatgcagttacaggacgtggttccacatcaagttct
ggttcaaaatcgatgcaggatggatggggaggtggtgatcgacctgctgtggcaaatact
cgtcccccaagctgggaggaagatgatgatgggccaatgggcttgtggaacagtactgga
actcaggagagtagttcaccctacaactcctctaactggcccgcaagtgggaagaaaatg
cacaagagctccatgaaaggtgggaacaatgacacatggataaaccctctctcttcacag
ttttccaaaatgggattactgagggagtcttccgaagacagtgttggtaacaaaatggac
ttaactgttggtggtctaccagacaaaaagctggaatctgacaaaagaggaatgaacatg
gattacaatggaatgatgaggaaggatagatcgggattccggccatcaaattccaaagat
tcgcccaccacagacagtggaccctactttgagaagctgactttgcctttctccaatcaa
gatgggtgcctgtctgacgaggcacctaactcgcccttctcccctcctccgagttgcaag
ctgtctccctcgggcactgctctacccaccgccaacctcggctgcatcggctctggtttt
aacatgcaaaacctaaacgctagacacaatggcaatcatggtttatttggcagtagcaca
gcacaatccagaggtgtacacacgcctcaggtgccgtccatgaattcatcccagcctaac
cttcgggctcaagtgcctccgcagttcctgccccctcctcaggttcctgcccctatgttg
aagcatgccactccaaatggtgccctgaacccagccctgtttggcctcggtcctcagcta
acccctcaacaaatagctatgctcagccaacttcctcagctcccacagttggcttaccag
ctgttgcttcaacaacaacagcagcagcagcaagtgctgcaaaaccaacgaaagctgtct
gccgccgtccgacaacaacaagaacagcaacttgttcgtattgtgaatgccctgcagcag
caacagcaacaacaacagcagcatcgacacaacagcaccccagggatgaagcattctcca
tcacaccctggcatgcccaagcaacatctggataatgtgcctagttctcttccctctggc
cttccagacttccagaccaaaggacagattcagccaggctacccaatgggcatgggctca
aacatgaacgtaaaccagttagatgtcaacagtattgtaggaatgaaagaacctcagtcg
cagcaatcacggctcaagcagtggacgactatggatggtctctctcctgccactccacca
ccagatcacaatcccatgaaaaatggtgctatttcgagcagcatggcgccaccggtgaag
cctcgagatagtttgccctattatgaaatgatagcaggtgattccttggccagccattct
ggccctgcgagtgataactggtccacccctaagctctcaaatggttccagcggatccagt
tggcctccagagttccgccctggggaaccatggaagggtttccaaaacattgaccccgaa
tcagacccgtatgcgaccccagcgagcatgataaacagctctgcagcacccccatccccg
gactcggaacaccaacttctcagggacaggagcacagggtccagttcctccctgaacacc
tcgctgccttcacccggtgcctggtcctatagtgcctcaaacagctcctacagcaccgta
cagagcacttcagccaagttcagtgacttcaagtctacgtggtctccagatccaattgga
catcctaggatgtggaaaaatcagatgtcatctaaaaacactaacccgccaacacggccg
ccaccaggactgaccaatcagaaacctccttcatctccatggggtagcggagcacctcga
ttcagcagaggatggggcatgcaggagtcacgatatgcccttagttcgaactggagtgat
ggcaattcgggtggatctggtcgggtcagctcttggctcgttcttcataatctcactcca
cagattgatggctccactctccgaacaatctgcatgcagcatggcccgctgataacattc
catctgaacctgacacacggcaccgcattggtccggtacagtaccaagcaagaggctgcc
aaggcccagactgcgctgcacatgtgtgtgttggggaacactaccatccttgctgagttt
gtcagtgaagaggaagtcaaccgctattttgcacaaggtcagttgtcaacaccttcccca
ggctggcagacgttggagacaggacagagtcagatggatccagtcggaagcagcctgcat
acgttcggaggtcgggccagcctgggacagtggaacagtgccggaggagtgggcaggggt
agtgggaacttggtgggagcctcgctttgggcaaccccaagctacacagcgagcctgtgg
ggggccccgaattccgacgattcgcaccgaatgggcagtccagcacccctgctacctggc
gacctcctgggtggaggggctgattcaatttga

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