Hemitrygon akajei (red stingray): 140719717
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Entry
140719717 CDS
T11019
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140719717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haka03000
]
140719717
03021 Transcription machinery [BR:
haka03021
]
140719717
03036 Chromosome and associated proteins [BR:
haka03036
]
140719717
Transcription factors [BR:
haka03000
]
Eukaryotic type
Helix-turn-helix
ARID
140719717
Transcription machinery [BR:
haka03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
140719717
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
140719717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
140719717
NCBI-ProteinID:
XP_072890629
LinkDB
All DBs
Position
32:complement(6972247..7093355)
Genome browser
AA seq
2053 aa
AA seq
DB search
MAAPVSALRDSDIGQAKAGDLAALKSGSGPGPTAEQEHHLPGNGSESGSGARDAFSNHRL
SAAPGTGEHSDEDNSHQPHGEPDGAASEHSNGGAGSVEPEPGRAAAGSLGLLTSDQRFDH
SNNNGGGSGPMANANPAPSPGPAAVPAAGYGYNHYRGPFHQHGGQQSPGMGAALHTGGLD
SFQPNSHEAFGHYNNYTAAYPARSGYTNQGYGLNSPRAGVAGPKASASNMAPSFQRFGGQ
HQQPAPAPGLQQQSQTASSTPTLNQLLTSPSGARAFTNYNQAHQDYNSNQELAKGGELGG
QYASAGWAAAQQRIHHPPISPGNSGQPLLRTQPTSPMDQMGMKRPQPYGGSNNPYAQQAP
PQQSGPYPGQPYGPPAPQRYPVGVQGRTQGTMGGALQYPQQVPPYSQQSAGSYCQQGQTP
YYNQQQPSYPQQQRFPLQQQDLSQEAFATQAPQGLTSNKPNQEELTLMQQGRPSSLPDLS
GSIDDLPTGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSP
ASVTQSRSGPLSPAAVPGNQMPPRPSSGQSDGILHPTMNPSAMGQDRGYIQRPPQLPQYN
SPQTGSALSPRQSSGGQMHAGMSPYQQNNSGNYGPQGAQYGPQGGYPRQPNYNAMTSANY
SLGGSMNAMSAGNQMHGQGPAPPYAGMPPGRIGPVAMGNRPYGGNMTQNTANLSAQMTSG
MCPPPTMNRKAQDTVAAMHAVANSVQNRQSTYPTMNQGSMMGSASPYNQGMNSMAGMMNP
QGSPYSMANSSAGMAPSPEMMALGEGKLPPTQKANNKADGMTKAESKSKKTSSSTTTNEK
IAKLYELGGEPERKMWIDRYFAFMEEKGTMMMNLPAVGRKPLDLYRLYMSVKDIGGLTQV
NKNKKWRELATNLNVGTSSSAASSLKKQYIQCLFAFECKIERGEDPPPDIFAATDSKKQQ
PKIQPPSPAGSGSLQGPQTPQSTSSSMAEGGDLKPPTPVSTPHSHMQPMPGSRSNSVSVQ
DPFADTSDPAFQKRSTVSQNPAYPPSMNTTDLIPRMPYEPNKDPFGGMRKAPGTDPFLSS
GPSPNTGMGDPYNRPPATGMAPRQQYAYGSGFERRSEHGMGPEGTVQSNASVNADSSMYS
PNRYPAQQRHDPYGSQYSGQGAPPGQSYSNQQPGMFPQQQNFKRQMDGTYGPPAKRHEGE
LYGMSYSAQQSQQDMYNQYSNAYPGTDRRPVQNQFPFQYGRERMQGPPGTATSQPVPPQM
MGGPLQSPPEGPQGSVWPGRNDMSYSYPSRQGPGTPPQAPAYHGMNRSEEMIGADQRMNH
DGQWASHVNQRQQSFTPSASLPPITRPSQSTYQTPPSVPNHISQVSSPAPMQRPLENRTS
PSKSPFIHSGMKMQKVGPPMPASHISGPSVQPPLIRRDITFPPGSVEASQPVLKSRRRLT
TKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSSVATFTLSQLPGFLELLVEYF
RRCLIEIFGILKEYEIGDPGQKTLLDPELFGKIQEPLGPEVEDDREDISEEEMAANLTED
ATVAESMEENPKHVSKFDRVPVKMVRKADVFVVDNSDKLGRVQEFDSGLLHWQIGGGDTT
EHIQTHFESKTQLPVRKRTLAHKGSTKRYTSENKKGAEGNLEATGNGEESEKSITATMDD
VLSARPGSLNKEVANGSVEGDTDNNKFPFAIHQAQNHKNIKILEDEPCSRDEVPLCLMAD
WQDSLAKRCICISNIIRSLSFVPGNDAEMSKHPGLLLILGKLILQHHEHPERKQAPLTYE
KEDEEDEGVSCDSDEWWWDCLEVLRENTLVTMANISGQLDLSLYPESICLPLLDGLLHWA
VCPAAEAQDPFPTLGPNSMLSPQRLVLESLCKLSIQDNNVDLILATPPFSRLEKLYGILV
RLIGERKSQVCREMCVVLLANLAQGDSLAARAIAVRKGSISNLLGFLEDSLAATQLQQSQ
PSLMHLQTAPIEPTSMDMMRRAAKALLAMAKVEENHSEFTLHEARLLDISVSPLLNSLVT
NVICDVLFMIGQS
NT seq
6162 nt
NT seq
+upstream
nt +downstream
nt
atggccgctccggtcagcgccctcagagacagcgatatcggccaggccaaggccggcgat
ctggcggcgttgaagtcgggaagtgggcccggccccaccgccgagcaggaacatcacttg
ccaggcaatggctcggagtcgggttccggcgccagggatgccttcagcaaccacaggttg
agcgcggctccgggaaccggcgagcacagcgacgaggacaacagccaccagccgcacggc
gagccggatggtgccgcctcggaacacagtaacggcggagcgggatccgtggagccggag
cctggccgggccgccgcgggcagcctaggcctcctgaccagcgaccagcgtttcgaccat
tccaacaacaacggcggaggctctgggcccatggccaacgcgaaccccgcgcctagtccg
ggcccggccgccgtgccggccgctggctacggttacaaccattaccggggcccgtttcac
caacatggcggacaacaaagccccggcatgggggcagcgctgcacaccggcggcctcgac
tccttccagcccaattcacacgaggccttcggccactacaacaattacactgcggcttat
ccggcccgcagcggctacaccaaccagggctacggcctcaactcgccgcgggccggagtg
gccgggcccaaagcctcggcctcgaatatggccccgagtttccagcggttcggagggcag
caccagcagccggcgcccgccccaggcctccagcaacaatcgcagacggcttctagcacc
ccgaccctcaaccaactgctcacctcgccgagtggagcgcgggccttcactaactataac
caagcccaccaggactataatagcaaccaagaactggctaagggaggcgagttgggcgga
cagtacgcgagcgcaggctgggcagcagcgcaacaaagaatacaccatccgcccatcagt
cccggcaacagcgggcagcccttgctcaggacccagccaactagccctatggaccagatg
gggatgaagagacctcagccttatggcggcagcaataatccatatgcacagcaggcacct
ccgcaacaaagtggaccttacccaggacaaccgtatggacctccagcgcctcagcgctat
cccgtgggtgtgcagggccggacccaaggcaccatggggggtgcgctgcagtacccacaa
caggtgcctccttacagccagcagagtgcaggcagttactgtcagcagggccagacacca
tactacaaccagcaacagccttcgtaccctcaacagcaacggttcccactacagcagcag
gatttgtctcaggaagcatttgccactcaggctccacaagggttaacttccaacaaaccc
aaccaggaggagctgaccctcatgcagcaggggcgtccatctagcctgccggatctgtcg
ggttccattgatgatttgccaaccgggacagaaggggcattgagccctggtgtgagtaca
tctggaatctccagcagtcaaggagaacaaagtaaccctgcgcagtcaccattctctcct
catacttccccacatctgcctggaatccgtggcccatcaccttcacctgtaggatcgcca
gctagtgtaacacagtccaggtctgggccattgtccccagcagctgtaccaggtaatcag
atgccaccccgcccttcaagtggacaatctgatggaattcttcacccaaccatgaatcca
tctgcaatggggcaggaccgaggctacatacagagacccccacaactgcctcagtacaac
tctccacaaacagggtcagcattatccccacgtcagtcatctgggggccagatgcatgct
ggaatgagcccgtatcagcaaaataactctggaaattatggacctcaaggtgctcagtat
ggacctcaaggaggctatcccagacaacccaactataacgcaatgaccagtgcaaactac
agcttgggaggttccatgaatgcaatgtctgctggcaaccaaatgcacggtcagggtcca
gcaccaccttacgctgggatgccaccagggagaataggacctgtcgcaatgggtaatcgg
ccctatggaggcaacatgacccagaacacagcaaacctatcagcacaaatgacctcaggg
atgtgcccgccaccaaccatgaaccgcaaggctcaggacacggtcgctgcaatgcatgca
gtggctaattcggtacagaataggcaatctacttatccaactatgaatcaaggaagtatg
atgggttctgcctcaccttacaatcaaggcatgaacagtatggcagggatgatgaatcca
cagggttctccatattccatggcaaatagttctgcaggcatggctcccagtcctgagatg
atggcacttggggaaggaaaattaccgccaacacagaaagcaaacaataaagcagatgga
atgacaaaggctgagtctaagtcgaagaagactagctcttccaccaccactaatgaaaaa
atcgcaaaactgtatgagttgggtggagagccagagcgaaagatgtggattgataggtac
tttgcctttatggaagagaagggcacaatgatgatgaatctccctgcagttggaaggaaa
ccattggacctttatcgactttatatgtccgtcaaagatattgggggactaacacaggtg
aataaaaacaaaaaatggcgtgaattggccaccaatctgaacgtgggcacttcaagcagt
gcagccagctctctgaagaaacaatatatccagtgtctgtttgcctttgagtgtaagatt
gaacgaggagaagatcctccacccgacatctttgcagccaccgattccaaaaagcaacaa
ccaaagatacaacctccttcgcctgctggttcaggttccctgcagggcccgcagacccct
cagtccaccagcagctcaatggcagaaggaggagatttaaagccaccaacgcccgtctca
acaccccatagccatatgcagccaatgccaggatccagaagcaactctgtgagtgtccag
gatccatttgcagacaccagtgacccagctttccaaaagaggtccactgtttctcaaaat
cctgcctacccacccagcatgaataccacggacttaatcccccgtatgccatacgaaccg
aacaaagatccatttggtgggatgaggaaagctcctggaacagatcctttcttgtcatct
ggaccctctcccaatactggaatgggagacccttataatcggcctcctgcaacaggaatg
gcaccacggcagcagtatgcatatggatctggatttgagaggaggtcagaacacggaatg
ggtccagaggggacagtacaatctaatgcgtcagtaaatgcagattccagcatgtattct
ccaaatcgttacccagctcagcagcggcatgatccttacgggagccagtactctggacag
ggagctccacctggacagtcgtattccaaccagcagcctggaatgtttccacagcaacaa
aacttcaagcgacagatggatggaacatatgggcctccagccaagagacacgaaggtgaa
ttatatggaatgtcctactcggcccagcaatcgcagcaagatatgtataaccagtatagc
aatgcctatccaggtactgatcgccggccagtgcagaatcagtttccttttcagtacggt
agagagagaatgcaaggtccccctggcacagccacttcgcagcctgtgccccctcaaatg
atgggaggtccgttgcagtcaccacctgagggaccacaggggtctgtgtggccagggcga
aatgacatgagttacagctatcccagccggcaaggtcctggtactccgccacaggctcca
gcataccatggcatgaatcgttctgaggagatgattggagctgatcagagaatgaaccat
gacgggcagtgggcttcccatgtcaaccagcgtcagcaatctttcaccccctctgcatct
cttccaccaatcacaagaccatcacagtctacctaccaaactcctccatcggtgccaaat
catatttcccaagtgtccagtccagctcccatgcagagaccattggaaaaccgtacctca
cccagcaaatcgccatttatccattcaggaatgaagatgcaaaaggttggaccgcccatg
ccggcatcccatatttctggaccctctgtgcagccgccactgataagacgagacatcacc
ttccctcccggttcagttgaagcatctcaaccagtcttgaaatcacgccggagactcacc
actaaggacattggcaccccagaagcttggcgagtgatgatgtcccttaaatctggcctc
ctggctgaaagtacatgggccttggacaccattaatattttattgtacgacgatagcagt
gtagccaccttcacattatctcagttacctggattcttggagcttctggtggaatatttc
cggcgatgcttgattgaaatttttgggattctgaaggagtacgagattggagatcctggc
caaaagacactcctggatccagagctgtttgggaaaatacaagaaccattggggcctgag
gtggaggacgacagggaagacatcagtgaagaggaaatggcagctaatttaactgaagat
gcaacagtcgctgaaagtatggaagagaatcccaagcacgtcagcaagtttgacagagtt
cctgtgaaaatggttagaaaagctgatgtgtttgtggtggataactctgataaattgggc
agggtacaggaatttgacagtggcttgctccattggcagattggaggaggtgacactaca
gaacacatccaaactcactttgagagtaagacgcagttacccgtgcggaaacgaaccctg
gcccacaagggatccacgaaaaggtacacatctgaaaataaaaagggggcagaaggaaac
ctcgaggcaacaggaaacggcgaggagtctgagaaaagcataactgccaccatggatgat
gttctgtcagcgaggcctggctccttgaacaaggaagtggctaacgggtcagtggagggg
gacacagataacaacaagtttccttttgctattcatcaggcacaaaatcataaaaatatc
aaaatccttgaggacgagccttgcagccgggatgaggtgccattgtgtttgatggccgac
tggcaggactctttagcaaagcggtgtatttgtatatcaaacattattcgcagcttgtcg
tttgtgcctggcaacgatgcagagatgtcaaagcaccccggcttactgctcatcttgggc
aagctcatcttgcagcatcatgagcaccctgaacggaaacaggcgccattaacgtacgag
aaggaggatgaggaagatgaaggtgtgagctgcgatagtgatgaatggtggtgggactgt
ttagaagtattacgggaaaacactcttgtcacaatggccaatatttcagggcagttggac
ctgtctctgtatccagagagtatctgcttgccacttctggacggattgttgcactgggct
gtgtgtcctgcagcagaggcccaagaccctttcccaacactaggccccaattcaatgctc
tctccccagagactcgtcctggagagcttgtgtaaacttagtatccaggacaataatgtg
gacctaatcctggcgacgcctccgtttagccgcttggagaaactttatgggatactggtc
cggctcattggggaacggaaaagccaggtgtgccgtgaaatgtgtgtggtactgttggca
aatctggcacaaggagacagcctggctgccagagcaattgccgttcgtaagggaagcatc
agtaatctactgggctttttggaggatagtctggcagctactcaactccagcagagtcag
cccagcctgatgcacttgcaaactgcacctattgagccaacgagtatggacatgatgcgg
cgggcagccaaggccttgctagcaatggcaaaagtagaagaaaaccactctgagttcacg
ttgcatgaggcacgactgctagatatctctgtatcgcctctcctgaactcactggttaca
aatgtaatttgtgatgtactcttcatgatcggccagtcatga
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integrated database retrieval system
