Hemitrygon akajei (red stingray): 140719816
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Entry
140719816 CDS
T11019
Symbol
sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
haka01009
]
140719816 (sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haka03021
]
140719816 (sfpq)
03041 Spliceosome [BR:
haka03041
]
140719816 (sfpq)
Protein phosphatases and associated proteins [BR:
haka01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140719816 (sfpq)
Transcription machinery [BR:
haka03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
140719816 (sfpq)
Spliceosome [BR:
haka03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
140719816 (sfpq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
140719816
NCBI-ProteinID:
XP_072890821
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Position
32:complement(19703663..19719806)
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AA seq
569 aa
AA seq
DB search
MSRDRFKNRTGFQRRGGMSPPFRGGNRNNVPNRPNGAGNPVEAPKQQPAPSSQSQVTAPA
QTPPQKSSAQGSQKSQEPDKKNGDAATAQPPGAARSGGGEGKSPYPGGEGQSRQQRESKS
ESETRHAQEVLRAQLSLLRKPGEKTYTQRCRLFVGNLPSDITEDDFKKLFEKYGEPGEVF
INKGKGFGFIRLESRTLAEIAKAELDDTPMRGRPLRIRFATHSAALTVRNLSPYVSNELL
EEAFSQFGQVERAIVIVDDRGRSTGKGIVEFATKPSARKALDRCSEGVFLLTASPRPVIV
EPMEQYDDEDGLPEKLAQRNPMYQKWVLKNQVEREHPPRFAQHGTFEFEYSQRWKSLDEM
EKQQREQVEKNMREARDKLENEMEDAYHEHQAMLLRQDLMRRQEELRRMEELHSQEVQKR
KQLELRQEEERRRREEEMLMRQREKEEMMRRQREENFRMGYMDPREREMRMAGGMTEQYT
TANQSFPPMAAMAYEGHSTLSNPGGPSAMTGQMMSTSANTSDMAGRNDRFGQGAPGPMNA
QPPRPMGPTGPNFSRGREEYETANKKPRY
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggatcgtttcaagaaccgcaccggattccagaggcgaggtggtatgagcccc
ccgttccgcggcggcaaccgcaacaatgtgcccaaccgcccgaacggagcgggaaaccca
gtggaggcccccaagcaacagccggcaccctcgtcgcagagccaggtgacagctccggcg
cagacgccgcctcagaagtcgtccgctcagggctcgcagaagtcgcaagagcccgacaag
aagaacggcgacgcggcgaccgctcagccccccggcgcggcccggagcggaggcggcgag
ggcaagtcgccttacccgggaggcgagggccagagccggcagcagcgtgagtcgaagagc
gagagcgagactcgccacgcgcaggaggtactgcgggcccagttgtcgctgctccggaag
ccaggcgagaagacctacacccagcggtgccgccttttcgtcggcaacctgccgagcgac
atcaccgaggatgactttaagaaactcttcgagaaatatggcgaacccggcgaggttttt
atcaacaaaggcaaggggttcggcttcatccggctggaaagcagaactttggctgaaata
gccaaagctgaacttgatgatacaccgatgagaggccggccacttcgcattcgttttgcc
actcattctgctgcactgactgtccgcaatctttccccctatgtttcaaatgaattgcta
gaggaagctttctctcaatttggtcaagtggagagggccattgtaattgtcgatgatcgt
gggagatcaacaggcaaaggcatagttgaatttgctacaaaaccatctgcacggaaggca
cttgaccgatgcagtgagggtgtattcctattaacagcatctcctcgtccagtgattgtg
gaaccaatggagcaatatgacgatgaggatggccttccagagaaactagcccaaaggaat
ccaatgtatcaaaagtgggttttaaaaaatcaagtagaacgagagcatcctcctcgtttt
gctcagcatggaacatttgagtttgaatattcccagaggtggaagtcacttgatgaaatg
gaaaaacagcagagagaacaagttgaaaagaacatgagagaggcaagggataagctggaa
aatgagatggaagatgcataccatgagcatcaggcaatgttgttgaggcaggatctcatg
cggcgccaagaagagctgcggcgcatggaggaactccacagccaggaagttcagaagcgc
aaacagcttgagttgaggcaagaggaagaacgtcgtagaagggaagaggaaatgttgatg
cggcaaagagaaaaagaggagatgatgaggcgccagagggaggagaacttccgcatgggg
tacatggatcctagagagcgtgaaatgcgaatggctggaggaatgacagaacaatatact
actgcaaatcaaagctttccgccaatggctgcaatggcctatgaaggccacagtacatta
agtaaccctggaggacctagtgcgatgactggacagatgatgagcaccagcgcgaacacc
agcgacatggcagggcgtaatgaccgctttggacagggtgccccaggtccaatgaatgct
caacccccacgtcctatggggcctactggtcccaattttagtagagggagagaagaatac
gaaacagctaacaagaagcctagatactaa
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